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Aliases for TUSC7 Gene

Subcategory (RNA class) for TUSC7 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for TUSC7 Gene

  • Tumor Suppressor Candidate 7 (Non-Protein Coding) 2 3 5
  • LSAMP Antisense RNA 3 (Non-Protein Coding) 3
  • Non-Protein Coding RNA 295 2
  • LSAMP Antisense RNA 3 2
  • NCRNA00295 3
  • LSAMP-AS1 3
  • LINC00902 3
  • LSAMP-AS3 3
  • LSAMPAS3 3

External Ids for TUSC7 Gene

Previous HGNC Symbols for TUSC7 Gene

  • NCRNA00295
  • LSAMP-AS3

Previous GeneCards Identifiers for TUSC7 Gene

  • GC03P116432

Summaries for TUSC7 Gene

GeneCards Summary for TUSC7 Gene

TUSC7 (Tumor Suppressor Candidate 7 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TUSC7 Gene

Genomics for TUSC7 Gene

Genomic Location for TUSC7 Gene

Chromosome:
3
Start:
116,709,235 bp from pter
End:
116,723,581 bp from pter
Size:
14,347 bases
Orientation:
Plus strand

Genomic View for TUSC7 Gene

Genes around TUSC7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TUSC7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TUSC7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TUSC7 Gene

No data available for Regulatory Elements for TUSC7 Gene

Proteins for TUSC7 Gene

Post-translational modifications for TUSC7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TUSC7 Gene

Domains & Families for TUSC7 Gene

Gene Families for TUSC7 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TUSC7: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TUSC7 Gene

Function for TUSC7 Gene

Phenotypes for TUSC7 Gene

GenomeRNAi human phenotypes for TUSC7:
genes like me logo Genes that share phenotypes with TUSC7: view

miRNA for TUSC7 Gene

miRTarBase miRNAs that target TUSC7

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for TUSC7 Gene

Localization for TUSC7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TUSC7 Gene

Pathways & Interactions for TUSC7 Gene

SuperPathways for TUSC7 Gene

No Data Available

Interacting Proteins for TUSC7 Gene

Gene Ontology (GO) - Biological Process for TUSC7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TUSC7 Gene

Drugs & Compounds for TUSC7 Gene

No Compound Related Data Available

Expression for TUSC7 Gene

mRNA expression in normal human tissues for TUSC7 Gene

mRNA differential expression in normal tissues according to GTEx for TUSC7 Gene

This gene is overexpressed in Testis (x50.8).
genes like me logo Genes that share expression patterns with TUSC7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TUSC7 Gene

Orthologs for TUSC7 Gene

Evolution for TUSC7 Gene

ENSEMBL:
Gene Tree for TUSC7 (if available)
TreeFam:
Gene Tree for TUSC7 (if available)

No data available for Orthologs for TUSC7 Gene

Paralogs for TUSC7 Gene

No data available for Paralogs for TUSC7 Gene

Variants for TUSC7 Gene

Sequence variations from dbSNP and Humsavar for TUSC7 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1133335 -- 116,716,805(+) GTGTT(A/C)GCCTT nc-transcript-variant
rs1401065 -- 116,709,262(-) ATTAG(C/T)CATCA upstream-variant-2KB
rs1401066 -- 116,709,196(-) CATAA(C/T)TCTGA upstream-variant-2KB
rs1401067 -- 116,708,981(-) AAGAC(A/G)TATTT upstream-variant-2KB
rs1401068 -- 116,708,520(-) GCACT(C/G)ATCTT upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TUSC7 Gene

Disorders for TUSC7 Gene

Relevant External Links for TUSC7

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TUSC7

No disorders were found for TUSC7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TUSC7 Gene

Publications for TUSC7 Gene

  1. Low expression of LOC285194 is associated with poor prognosis in colorectal cancer. (PMID: 23680400) Qi P. … Du X. (J Transl Med 2013) 2 3 67
  2. Recurrent focal copy-number changes and loss of heterozygosity implicate two noncoding RNAs and one tumor suppressor gene at chromosome 3q13.31 in osteosarcoma. (PMID: 20048075) Pasic I. … Malkin D. (Cancer Res. 2010) 2 3
  3. Reciprocal repression between TUSC7 and miR-23b in gastric cancer. (PMID: 25765901) Qi P. … Du X. (Int. J. Cancer 2015) 3
  4. Association of decreased expression of long non-coding RNA LOC285194 with chemoradiotherapy resistance and poor prognosis in esophageal squamous cell carcinoma. (PMID: 25169763) Tong Y.S. … Cao X.F. (J Transl Med 2014) 3
  5. LncRNA loc285194 is a p53-regulated tumor suppressor. (PMID: 23558749) Liu Q. … Mo Y.Y. (Nucleic Acids Res. 2013) 3

Products for TUSC7 Gene

Sources for TUSC7 Gene

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