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Aliases for TUBBP9 Gene

Aliases for TUBBP9 Gene

  • Tubulin Beta Class I Pseudogene 9 2 3 5
  • Tubulin, Beta Class I Pseudogene 9 2

External Ids for TUBBP9 Gene

Previous GeneCards Identifiers for TUBBP9 Gene

  • GC06P039963

Summaries for TUBBP9 Gene

GeneCards Summary for TUBBP9 Gene

TUBBP9 (Tubulin Beta Class I Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TUBBP9 Gene

Genomics for TUBBP9 Gene

Regulatory Elements for TUBBP9 Gene

Enhancers for TUBBP9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F039992 0.9 ENCODE 0.8 +1.0 963 2.3 PKNOX1 ATF1 CBX5 ELK1 GATA2 ZNF263 CREB3 MEF2D SMARCA4 PBX2 TUBBP9 GC06P040014
GH06F039998 0.4 ENCODE 0.4 +6.6 6579 0.9 PKNOX1 ATF1 ARNT CBX5 ELK1 GATA2 CEBPZ NCOA1 CREB3 MBD2 ANKRD18EP TUBBP9 GC06P040014
GH06F039981 1.2 FANTOM5 0.4 -11.3 -11331 0.0 CTCF ZNF175 ZNF384 CEBPG ZNF644 ZNF2 RAD21 ZNF316 SMC3 NFE2 MOCS1 DAAM2 TUBBP9 RPL23P6
GH06F039965 0.9 ENCODE 0.3 -27.0 -26971 1.3 DMAP1 ZIC2 ZNF335 FOSL1 ZNF121 ZNF263 ZBTB10 ZBTB11 USF2 CEBPB LOC100505635 RPL23P6 TUBBP9
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TUBBP9 on UCSC Golden Path with GeneCards custom track

Genomic Location for TUBBP9 Gene

Chromosome:
6
Start:
39,992,652 bp from pter
End:
40,000,269 bp from pter
Size:
7,618 bases
Orientation:
Plus strand

Genomic View for TUBBP9 Gene

Genes around TUBBP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TUBBP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TUBBP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TUBBP9 Gene

Proteins for TUBBP9 Gene

Post-translational modifications for TUBBP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TUBBP9 Gene

Domains & Families for TUBBP9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TUBBP9 Gene

Function for TUBBP9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TUBBP9 Gene

Localization for TUBBP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TUBBP9 Gene

Pathways & Interactions for TUBBP9 Gene

SuperPathways for TUBBP9 Gene

No Data Available

Interacting Proteins for TUBBP9 Gene

Gene Ontology (GO) - Biological Process for TUBBP9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TUBBP9 Gene

Transcripts for TUBBP9 Gene

mRNA/cDNA for TUBBP9 Gene

(6) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TUBBP9 Gene

No ASD Table

Relevant External Links for TUBBP9 Gene

GeneLoc Exon Structure for
TUBBP9
ECgene alternative splicing isoforms for
TUBBP9

Expression for TUBBP9 Gene

mRNA expression in normal human tissues for TUBBP9 Gene

mRNA differential expression in normal tissues according to GTEx for TUBBP9 Gene

This gene is overexpressed in Testis (x12.4).

NURSA nuclear receptor signaling pathways regulating expression of TUBBP9 Gene:

TUBBP9
genes like me logo Genes that share expression patterns with TUBBP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TUBBP9 Gene

Orthologs for TUBBP9 Gene

Evolution for TUBBP9 Gene

ENSEMBL:
Gene Tree for TUBBP9 (if available)
TreeFam:
Gene Tree for TUBBP9 (if available)

No data available for Orthologs for TUBBP9 Gene

Paralogs for TUBBP9 Gene

No data available for Paralogs for TUBBP9 Gene

Variants for TUBBP9 Gene

Relevant External Links for TUBBP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TUBBP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TUBBP9 Gene

Disorders for TUBBP9 Gene

No disorders were found for TUBBP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TUBBP9 Gene

Publications for TUBBP9 Gene

No publications were found for TUBBP9 Gene.

Products for TUBBP9 Gene

Sources for TUBBP9 Gene

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