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Aliases for TUBBP9 Gene

Aliases for TUBBP9 Gene

  • Tubulin Beta Class I Pseudogene 9 2 3 5
  • Tubulin, Beta Class I Pseudogene 9 2

External Ids for TUBBP9 Gene

Previous GeneCards Identifiers for TUBBP9 Gene

  • GC06P039963

Summaries for TUBBP9 Gene

GeneCards Summary for TUBBP9 Gene

TUBBP9 (Tubulin Beta Class I Pseudogene 9) is a Pseudogene.

Additional gene information for TUBBP9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TUBBP9 Gene

Genomics for TUBBP9 Gene

GeneHancer (GH) Regulatory Elements for TUBBP9 Gene

Promoters and enhancers for TUBBP9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I039992 Enhancer 0.9 ENCODE 550.8 +1.0 963 2.3 PKNOX1 ATF1 ZNF280A TCF12 ZNF766 CBX5 GATA2 ZNF143 ZNF592 MEF2D TUBBP9 ANKRD18EP GC06P042393
GH06I039998 Enhancer 1 ENCODE 0.4 +6.6 6578 0.9 PKNOX1 ATF1 ARNT NCOA2 ZNF280A TCF12 ZNF766 CBX5 GATA2 ZNF143 ANKRD18EP TUBBP9 GC06P042393
GH06I039981 Enhancer 0.8 FANTOM5 0.4 -11.3 -11330 0 ZNF2 RAD21 ZNF766 ZNF143 ZNF362 ZNF654 CEBPB REST ZNF148 CEBPA MOCS1 DAAM2 TUBBP9 RPL23P6
GH06I039982 Enhancer 0.8 Ensembl 0.4 -11.6 -11551 0.2 CTCF BACH1 ZNF384 CEBPG ZNF2 ZNF644 RAD21 FOSL1 CC2D1A ZNF766 TUBBP9 RPL23P6
GH06I039965 Enhancer 0.2 ENCODE 0.3 -27.0 -26971 1.3 LOC100505635 RPL23P6 TUBBP9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TUBBP9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TUBBP9 Gene

Genomic Locations for TUBBP9 Gene
chr6:39,992,652-40,000,269
(GRCh38/hg38)
Size:
7,618 bases
Orientation:
Plus strand
chr6:39,960,554-39,967,972
(GRCh37/hg19)

Genomic View for TUBBP9 Gene

Genes around TUBBP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TUBBP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TUBBP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TUBBP9 Gene

Proteins for TUBBP9 Gene

Post-translational modifications for TUBBP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TUBBP9 Gene

Domains & Families for TUBBP9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TUBBP9 Gene

Function for TUBBP9 Gene

Phenotypes From GWAS Catalog for TUBBP9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TUBBP9 Gene

Localization for TUBBP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TUBBP9 Gene

Pathways & Interactions for TUBBP9 Gene

SuperPathways for TUBBP9 Gene

No Data Available

Interacting Proteins for TUBBP9 Gene

Gene Ontology (GO) - Biological Process for TUBBP9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TUBBP9 Gene

Drugs & Compounds for TUBBP9 Gene

No Compound Related Data Available

Transcripts for TUBBP9 Gene

mRNA/cDNA for TUBBP9 Gene

(6) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TUBBP9 Gene

No ASD Table

Relevant External Links for TUBBP9 Gene

GeneLoc Exon Structure for
TUBBP9
ECgene alternative splicing isoforms for
TUBBP9

Expression for TUBBP9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TUBBP9 Gene

mRNA differential expression in normal tissues according to GTEx for TUBBP9 Gene

This gene is overexpressed in Testis (x12.4).

NURSA nuclear receptor signaling pathways regulating expression of TUBBP9 Gene:

TUBBP9
genes like me logo Genes that share expression patterns with TUBBP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TUBBP9 Gene

Orthologs for TUBBP9 Gene

Evolution for TUBBP9 Gene

ENSEMBL:
Gene Tree for TUBBP9 (if available)
TreeFam:
Gene Tree for TUBBP9 (if available)

No data available for Orthologs for TUBBP9 Gene

Paralogs for TUBBP9 Gene

No data available for Paralogs for TUBBP9 Gene

Variants for TUBBP9 Gene

Additional Variant Information for TUBBP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TUBBP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TUBBP9 Gene

Disorders for TUBBP9 Gene

No disorders were found for TUBBP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TUBBP9 Gene

Publications for TUBBP9 Gene

No publications were found for TUBBP9 Gene.

Products for TUBBP9 Gene

Sources for TUBBP9 Gene

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