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Aliases for TUBBP2 Gene

Aliases for TUBBP2 Gene

  • Tubulin Beta Pseudogene 2 2 3 5
  • Tubulin, Beta Polypeptide Pseudogene 2 2
  • Tubulin, Beta Pseudogene 2 2

External Ids for TUBBP2 Gene

Previous GeneCards Identifiers for TUBBP2 Gene

  • GC13U990031
  • GC13M040858
  • GC13M041957

Summaries for TUBBP2 Gene

GeneCards Summary for TUBBP2 Gene

TUBBP2 (Tubulin Beta Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TUBBP2 Gene

Genomics for TUBBP2 Gene

Regulatory Elements for TUBBP2 Gene

Enhancers for TUBBP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F041385 0.7 Ensembl 0.8 -0.8 -818 0.8 BCOR PKNOX1 ESRRA GTF2E2 ZMYM3 ZNF384 NFXL1 ZNF335 ADNP SMARCA5 NAA16 TUBBP2 GC13M041432
GH13F041354 1.3 FANTOM5 Ensembl ENCODE 0.3 +28.6 28636 3.3 CEBPB MAFG CEBPG ZNF316 GATA3 CEBPA KLF9 NFE2L1 NFE2 MAFK NAA16 RGCC MTRF1 ELF1 RNU6-57P TUBBP2
GH13F041402 0.6 ENCODE 0.3 -17.9 -17945 0.8 ZNF316 ZBED1 ETV4 GABPB1 ZNF24 ZNF600 ZIC2 NAA16 RNU6-57P TUBBP2 GC13M041432
GH13F041411 0.6 Ensembl 0.3 -26.7 -26718 0.2 CTCF KLF1 ZNF654 SIN3A REST RAD21 GATA3 SMC3 RNU6-57P NAA16 GC13M041432 TUBBP2
GH13F041427 0.6 Ensembl 0.2 -43.0 -43018 1.2 ZNF202 CTCF JUND MNT FOS RAD21 RGCC GC13M041432 TUBBP2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TUBBP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TUBBP2 Gene

Chromosome:
13
Start:
41,383,682 bp from pter
End:
41,385,183 bp from pter
Size:
1,502 bases
Orientation:
Minus strand

Genomic View for TUBBP2 Gene

Genes around TUBBP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TUBBP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TUBBP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TUBBP2 Gene

Proteins for TUBBP2 Gene

Post-translational modifications for TUBBP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TUBBP2 Gene

Domains & Families for TUBBP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TUBBP2 Gene

Function for TUBBP2 Gene

Molecular function for TUBBP2 Gene

GENATLAS Biochemistry:
tubulin,beta polypeptide,pseudogene 2

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TUBBP2 Gene

Localization for TUBBP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TUBBP2 Gene

Pathways & Interactions for TUBBP2 Gene

SuperPathways for TUBBP2 Gene

No Data Available

Interacting Proteins for TUBBP2 Gene

Gene Ontology (GO) - Biological Process for TUBBP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TUBBP2 Gene

Transcripts for TUBBP2 Gene

mRNA/cDNA for TUBBP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TUBBP2 Gene

No ASD Table

Relevant External Links for TUBBP2 Gene

GeneLoc Exon Structure for
TUBBP2
ECgene alternative splicing isoforms for
TUBBP2

Expression for TUBBP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TUBBP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of TUBBP2 Gene:

TUBBP2
genes like me logo Genes that share expression patterns with TUBBP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TUBBP2 Gene

Orthologs for TUBBP2 Gene

Evolution for TUBBP2 Gene

ENSEMBL:
Gene Tree for TUBBP2 (if available)
TreeFam:
Gene Tree for TUBBP2 (if available)

No data available for Orthologs for TUBBP2 Gene

Paralogs for TUBBP2 Gene

No data available for Paralogs for TUBBP2 Gene

Variants for TUBBP2 Gene

Relevant External Links for TUBBP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TUBBP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TUBBP2 Gene

Disorders for TUBBP2 Gene

No disorders were found for TUBBP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TUBBP2 Gene

Publications for TUBBP2 Gene

  1. A contiguous linkage map of chromosome 13q with 39 distinct loci separated on average by 5.1 centimorgans. (PMID: 1685473) Bowcock A.M. … Cavalli-Sforza L. (Genomics 1991) 2 3 64
  2. FBXW7 modulates cellular stress response and metastatic potential through a88HSF1 post-translational modification. (PMID: 25720964) Kourtis N. … Aifantis I. (Nat. Cell Biol. 2015) 3 64

Products for TUBBP2 Gene

Sources for TUBBP2 Gene

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