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Aliases for TUBB2BP1 Gene

Aliases for TUBB2BP1 Gene

  • Tubulin Beta 2B Class IIb Pseudogene 1 2 3 5

External Ids for TUBB2BP1 Gene

Summaries for TUBB2BP1 Gene

GeneCards Summary for TUBB2BP1 Gene

TUBB2BP1 (Tubulin Beta 2B Class IIb Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TUBB2BP1 Gene

Genomics for TUBB2BP1 Gene

Regulatory Elements for TUBB2BP1 Gene

Enhancers for TUBB2BP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F003156 1 FANTOM5 ENCODE 39.5 +17.7 17657 11.6 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 TUBB2A TUBB2B PSMG4 TUBB2BP1 RIPK1 FAM136BP ENSG00000228365 LOC107987516 ENSG00000272277 BPHL
GH06F003137 1.2 Ensembl ENCODE 15 +40.9 40886 2.8 PKNOX1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF48 YY1 SLC30A9 ZNF207 TUBB2B TUBB2BP1 BPHL PSMG4 GC06P003150
GH06F003249 0.8 Ensembl ENCODE 8.2 -71.2 -71182 2.5 HDGF ATF1 PKNOX1 ARNT CREB3L1 SIN3A ARID4B DMAP1 ZNF2 YY1 ENSG00000228170 BPHL PSMG4 TUBB2BP1 PIR45758 TUBB2B
GH06F003258 1.1 FANTOM5 ENCODE 7.2 -79.9 -79910 2.7 HDGF PKNOX1 ARNT MLX CREB3L1 ZFP64 ARID4B SIN3A DMAP1 YY1 PSMG4 TUBB2BP1 PIR45758 TUBB2B
GH06F003226 0.4 ENCODE 7 -48.5 -48453 4.1 HDGF ATF1 CREB3L1 ZNF133 ARID4B SIN3A ZNF2 ZNF121 GLIS2 ZNF263 FAM136BP ENSG00000228365 LOC107987516 LOC102724096 LINC01011 PSMG4 TUBB2B TUBB2BP1 GC06M003225 GC06M003227
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TUBB2BP1 on UCSC Golden Path with GeneCards custom track

Promoters for TUBB2BP1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001877546 -237 799 PKNOX1 NFIA MIER2 REST

Genomic Location for TUBB2BP1 Gene

Chromosome:
6
Start:
3,177,039 bp from pter
End:
3,179,764 bp from pter
Size:
2,726 bases
Orientation:
Minus strand

Genomic View for TUBB2BP1 Gene

Genes around TUBB2BP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TUBB2BP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TUBB2BP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TUBB2BP1 Gene

Proteins for TUBB2BP1 Gene

Post-translational modifications for TUBB2BP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TUBB2BP1 Gene

Domains & Families for TUBB2BP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TUBB2BP1 Gene

Function for TUBB2BP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TUBB2BP1 Gene

Localization for TUBB2BP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TUBB2BP1 Gene

Pathways & Interactions for TUBB2BP1 Gene

SuperPathways for TUBB2BP1 Gene

No Data Available

Interacting Proteins for TUBB2BP1 Gene

Gene Ontology (GO) - Biological Process for TUBB2BP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TUBB2BP1 Gene

Transcripts for TUBB2BP1 Gene

mRNA/cDNA for TUBB2BP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TUBB2BP1 Gene

No ASD Table

Relevant External Links for TUBB2BP1 Gene

GeneLoc Exon Structure for
TUBB2BP1
ECgene alternative splicing isoforms for
TUBB2BP1

Expression for TUBB2BP1 Gene

mRNA expression in normal human tissues for TUBB2BP1 Gene

mRNA differential expression in normal tissues according to GTEx for TUBB2BP1 Gene

This gene is overexpressed in Brain - Hypothalamus (x4.5), Brain - Frontal Cortex (BA9) (x4.2), Brain - Amygdala (x4.1), and Brain - Anterior cingulate cortex (BA24) (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of TUBB2BP1 Gene:

TUBB2BP1
genes like me logo Genes that share expression patterns with TUBB2BP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TUBB2BP1 Gene

Orthologs for TUBB2BP1 Gene

Evolution for TUBB2BP1 Gene

ENSEMBL:
Gene Tree for TUBB2BP1 (if available)
TreeFam:
Gene Tree for TUBB2BP1 (if available)

No data available for Orthologs for TUBB2BP1 Gene

Paralogs for TUBB2BP1 Gene

No data available for Paralogs for TUBB2BP1 Gene

Variants for TUBB2BP1 Gene

Relevant External Links for TUBB2BP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TUBB2BP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TUBB2BP1 Gene

Disorders for TUBB2BP1 Gene

No disorders were found for TUBB2BP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TUBB2BP1 Gene

Publications for TUBB2BP1 Gene

No publications were found for TUBB2BP1 Gene.

Products for TUBB2BP1 Gene

Sources for TUBB2BP1 Gene

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