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Aliases for TUBB2BP1 Gene

Aliases for TUBB2BP1 Gene

  • Tubulin Beta 2B Class IIb Pseudogene 1 2 3 5

External Ids for TUBB2BP1 Gene

Summaries for TUBB2BP1 Gene

GeneCards Summary for TUBB2BP1 Gene

TUBB2BP1 (Tubulin Beta 2B Class IIb Pseudogene 1) is a Pseudogene.

Additional gene information for TUBB2BP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TUBB2BP1 Gene

Genomics for TUBB2BP1 Gene

GeneHancer (GH) Regulatory Elements for TUBB2BP1 Gene

Promoters and enhancers for TUBB2BP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I003179 Promoter 0.8 Ensembl 550.8 -0.3 -336 0.6 MEIS2 NFIC PKNOX1 RFX1 NFIA MIER2 REST TUBB2BP1 ENSG00000228170 PSMG4 TUBB2B BPHL GC06M003095 GC06P003150
GH06I003156 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 39.5 +17.7 17656 11.6 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC SSRP1 ZNF610 TUBB2A TUBB2B TUBB2BP1 PSMG4 PRPF4B C6orf201 RIPK1 BPHL LOC105374889 GC06P003150
GH06I003137 Enhancer 1.4 Ensembl ENCODE dbSUPER 15.1 +40.9 40886 2.8 PKNOX1 CLOCK FOXA2 MLX ARID4B SIN3A DMAP1 ZNF48 ETS1 YY1 TUBB2B TUBB2BP1 BPHL PSMG4 ENSG00000228170 GC06P003150 GC06M003095
GH06I003258 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 7.2 -79.9 -79909 2.7 HDGF PKNOX1 CLOCK MLX ZFP64 ARID4B SIN3A DMAP1 ZBTB7B YY1 PSMG4 TUBB2BP1 PIR45758 TUBB2B
GH06I003117 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 6.1 +60.4 60441 3.6 HDGF SMAD1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 BPHL TUBB2A ENSG00000228170 PSMG4 TUBB2B TUBB2BP1 GC06P003115 GC06P003150 GC06M003095
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TUBB2BP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TUBB2BP1 Gene

Genomic Locations for TUBB2BP1 Gene
chr6:3,177,039-3,179,764
(GRCh38/hg38)
Size:
2,726 bases
Orientation:
Minus strand
chr6:3,177,273-3,179,998
(GRCh37/hg19)

Genomic View for TUBB2BP1 Gene

Genes around TUBB2BP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TUBB2BP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TUBB2BP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TUBB2BP1 Gene

Proteins for TUBB2BP1 Gene

Post-translational modifications for TUBB2BP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TUBB2BP1 Gene

Domains & Families for TUBB2BP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TUBB2BP1 Gene

Function for TUBB2BP1 Gene

Phenotypes From GWAS Catalog for TUBB2BP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TUBB2BP1 Gene

Localization for TUBB2BP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TUBB2BP1 Gene

Pathways & Interactions for TUBB2BP1 Gene

SuperPathways for TUBB2BP1 Gene

No Data Available

Interacting Proteins for TUBB2BP1 Gene

Gene Ontology (GO) - Biological Process for TUBB2BP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TUBB2BP1 Gene

Drugs & Compounds for TUBB2BP1 Gene

No Compound Related Data Available

Transcripts for TUBB2BP1 Gene

mRNA/cDNA for TUBB2BP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TUBB2BP1 Gene

No ASD Table

Relevant External Links for TUBB2BP1 Gene

GeneLoc Exon Structure for
TUBB2BP1
ECgene alternative splicing isoforms for
TUBB2BP1

Expression for TUBB2BP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TUBB2BP1 Gene

mRNA differential expression in normal tissues according to GTEx for TUBB2BP1 Gene

This gene is overexpressed in Brain - Hypothalamus (x4.5), Brain - Frontal Cortex (BA9) (x4.2), Brain - Amygdala (x4.1), and Brain - Anterior cingulate cortex (BA24) (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of TUBB2BP1 Gene:

TUBB2BP1
genes like me logo Genes that share expression patterns with TUBB2BP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TUBB2BP1 Gene

Orthologs for TUBB2BP1 Gene

Evolution for TUBB2BP1 Gene

ENSEMBL:
Gene Tree for TUBB2BP1 (if available)
TreeFam:
Gene Tree for TUBB2BP1 (if available)

No data available for Orthologs for TUBB2BP1 Gene

Paralogs for TUBB2BP1 Gene

No data available for Paralogs for TUBB2BP1 Gene

Variants for TUBB2BP1 Gene

Additional Variant Information for TUBB2BP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TUBB2BP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TUBB2BP1 Gene

Disorders for TUBB2BP1 Gene

No disorders were found for TUBB2BP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TUBB2BP1 Gene

Publications for TUBB2BP1 Gene

No publications were found for TUBB2BP1 Gene.

Products for TUBB2BP1 Gene

Sources for TUBB2BP1 Gene

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