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Aliases for TUBA3FP Gene

Aliases for TUBA3FP Gene

  • Tubulin, Alpha 3f, Pseudogene 2 3

External Ids for TUBA3FP Gene

Previous GeneCards Identifiers for TUBA3FP Gene

  • GC22M021360
  • GC22M021366

Summaries for TUBA3FP Gene

GeneCards Summary for TUBA3FP Gene

TUBA3FP (Tubulin, Alpha 3f, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TUBA3FP Gene

Genomics for TUBA3FP Gene

Genomic Location for TUBA3FP Gene

Start:
21,002,895 bp from pter
End:
21,014,292 bp from pter
Size:
11,398 bases
Orientation:
Minus strand

Genomic View for TUBA3FP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TUBA3FP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TUBA3FP Gene

No data available for Regulatory Elements for TUBA3FP Gene

Proteins for TUBA3FP Gene

Post-translational modifications for TUBA3FP Gene

No Post-translational modifications

No data available for DME Specific Peptides for TUBA3FP Gene

Domains for TUBA3FP Gene

Gene Families for TUBA3FP Gene

HGNC:
  • TUB :Tubulins

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TUBA3FP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TUBA3FP Gene

Function for TUBA3FP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TUBA3FP Gene

Localization for TUBA3FP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TUBA3FP Gene

Pathways for TUBA3FP Gene

SuperPathways for TUBA3FP Gene

No Data Available

Interacting Proteins for TUBA3FP Gene

Gene Ontology (GO) - Biological Process for TUBA3FP Gene

None

No data available for Pathways by source for TUBA3FP Gene

Transcripts for TUBA3FP Gene

Unigene Clusters for TUBA3FP Gene

Tubulin, alpha 3f, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TUBA3FP Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b · 3c · 3d ^ 4
SP1:
SP2: -
SP3:

Relevant External Links for TUBA3FP Gene

GeneLoc Exon Structure for
TUBA3FP
ECgene alternative splicing isoforms for
TUBA3FP

Expression for TUBA3FP Gene

mRNA expression in normal human tissues for TUBA3FP Gene

mRNA differential expression in normal tissues according to GTEx for TUBA3FP Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (7.2), Brain - Cerebellum (6.1), and Pituitary (5.2).

SOURCE GeneReport for Unigene cluster for TUBA3FP Gene Hs.585006

genes like me logo Genes that share expressions with TUBA3FP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for TUBA3FP Gene

Orthologs for TUBA3FP Gene

Evolution for TUBA3FP Gene

ENSEMBL:
Gene Tree for TUBA3FP (if available)
TreeFam:
Gene Tree for TUBA3FP (if available)

No data available for Orthologs for TUBA3FP Gene

Paralogs for TUBA3FP Gene

No data available for Paralogs for TUBA3FP Gene

Variants for TUBA3FP Gene

Sequence variations from dbSNP and Humsavar for TUBA3FP Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs389623 -- 21,011,454(+) AGTTC(A/G)GCAAG nc-transcript-variant
rs389624 -- 21,011,455(+) GTTCG(G/T)CAAGG nc-transcript-variant
rs398776 -- 21,012,063(+) TTGTG(A/G)GGGCC intron-variant
rs399647 -- 21,011,095(+) ATGAT(A/G)TTGTT intron-variant
rs408288 -- 21,011,875(+) CCATC(A/G)ATGAT intron-variant

Relevant External Links for TUBA3FP Gene

HapMap Linkage Disequilibrium report
TUBA3FP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TUBA3FP Gene

Disorders for TUBA3FP Gene

No disorders were found for TUBA3FP Gene.

No data available for UniProtKB/Swiss-Prot for TUBA3FP Gene

Publications for TUBA3FP Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3
  4. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3
  5. The carboxy-terminal peptide of detyrosinated alpha tubulin provides a minimal system to study the substrate specificity of tubulin-tyrosine ligase. (PMID: 7510228) RA1diger M. … Weber K. (Eur. J. Biochem. 1994) 23

Products for TUBA3FP Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TUBA3FP
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for TUBA3FP
    • Block miRNA regulation of TUBA3FP using miScript Target Protectors

    Sources for TUBA3FP Gene

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