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TUBA1C Gene

protein-coding   GIFtS: 64
GCID: GC12P049582

Tubulin, Alpha 1c

(Previous names: tubulin, alpha 6)
(Previous symbol: TUBA6)
  See TUBA1C-related diseases
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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This gene clusters with an RNA gene
Subcategory (RNA class): antisense

Quality score for the ORGUL clustered with this gene is 3

Aliases
Tubulin, Alpha 1c1 2     Tubulin Alpha-6 Chain2 3
TUBA61 2 3     bcm9482
Tubulin, Alpha 61 2     Tubulin Alpha-1C Chain2
Alpha-Tubulin 62 3     

External Ids:    HGNC: 207681   Entrez Gene: 847902   Ensembl: ENSG000001675537   UniProtKB: Q9BQE33   
ORGUL members:         

Export aliases for TUBA1C gene to outside databases

Previous GC identifers: GC12P047908 GC12P049658 GC12P046689


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for TUBA1C Gene:
TUBA1C (tubulin, alpha 1c) is a protein-coding gene. Diseases associated with TUBA1C include distal hereditary motor neuropathy, type ii, and osteoblastoma. GO annotations related to this gene include structural molecule activity and GTP binding. An important paralog of this gene is TUBA3C.

UniProtKB/Swiss-Prot: TBA1C_HUMAN, Q9BQE3
Function: Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site
on the beta chain and one at a non-exchangeable site on the alpha chain

summary for TUBA1C Gene:
Microtubules are cylindrical tubes of 20-25 nm in diameter. They are composed of protofilaments which are in
turn composed of alpha- and beta-tubulin polymers. Each microtubule is polarized, at one end alpha-subunits
are exposed (-) and at the other beta-subunits are exposed (+). Microtubules act as a scaffold to determine
cell shape, and provide a backbone for cell organelles and vesicles to move on, a process that requires
motor proteins. The major microtubule motor proteins are kinesin, which generally moves towards the (+) end
of the microtubule, and dynein, which generally moves towards the (-) end. Microtubules also form the
spindle fibers for separating chromosomes during mitosis.

Gene Wiki entry for TUBA1C Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence at NCBI GenBank:
NC_000012.11  NC_018923.2  NT_029419.13  
Regulatory elements:
   Regulatory transcription factor binding sites in the TUBA1C gene promoter:
         HNF-1A   YY1   PPAR-gamma1   CBF-A   CBF-B   HNF-1   PPAR-gamma2   CBF(2)   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidTUBA1C promoter sequence
   Search Chromatin IP Primers for TUBA1C

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat TUBA1C


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 12q13.12   Ensembl cytogenetic band:  12q13.12   HGNC cytogenetic band: 12q13.12

TUBA1C Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TUBA1C gene location

GeneLoc information about chromosome 12         GeneLoc Exon Structure

GeneLoc location for GC12P049582:  view genomic region     (about GC identifiers)

Start:
49,582,519 bp from pter      End:
49,667,114 bp from pter
Size:
84,596 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., and/or eBioscience,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., and/or eBioscience, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
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UniProtKB/Swiss-Prot: TBA1C_HUMAN, Q9BQE3 (See protein sequence)
Recommended Name: Tubulin alpha-1C chain  
Size: 449 amino acids; 49895 Da
Subunit: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer
diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form
protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule
plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different
protofilament numbers can be found in some organisms and specialized cells

Explore the universe of human proteins at neXtProt for TUBA1C: NX_Q9BQE3

Explore proteomics data for TUBA1C at MOPED

Post-translational modifications: 

  • Undergoes a tyrosination/detyrosination cycle, the cyclic removal and re-addition of a C-terminal tyrosine residue
    by the enzymes tubulin tyrosine carboxypeptidase (TTCP) and tubulin tyrosine ligase (TTL), respectively (By
    similarity)1
  • Some glutamate residues at the C-terminus are polyglutamylated. This modification occurs exclusively on glutamate
    residues and results in polyglutamate chains on the gamma-carboxyl group. Also monoglycylated but not
    polyglycylated due to the absence of functional TTLL10 in human. Monoglycylation is mainly limited to tubulin
    incorporated into axonemes (cilia and flagella) whereas glutamylation is prevalent in neuronal cells, centrioles,
    axonemes, and the mitotic spindle. Both modifications can coexist on the same protein on adjacent residues, and
    lowering glycylation levels increases polyglutamylation, and reciprocally. The precise function of such
    modifications is still unclear but they regulate the assembly and dynamics of axonemal microtubules (Probable)1
  • Acetylation of alpha chains at Lys-40 stabilizes microtubules and affects affinity and processivity of microtubule
    motors. This modification has a role in multiple cellular functions, ranging from cell motility, cell cycle
    progression or cell differentiation to intracellular trafficking and signaling (By similarity)1
  • Ubiquitination2 at Lys60, Lys96, Lys112, Lys163, Lys280, Lys304, Lys311, Lys326, Lys336, Lys338,
                                 Lys352, Lys370, Lys394, Lys401
  • Modification sites at PhosphoSitePlus

  • See TUBA1C Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins: NP_116093.1  
    ENSEMBL proteins: 
     ENSP00000443475   ENSP00000447669   ENSP00000448646   ENSP00000447910   ENSP00000301072  
     ENSP00000448211  
    Reactome Protein details: Q9BQE3

    TUBA1C Human Recombinant Protein Products:

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    Novus Biologicals TUBA1C Protein
    Novus Biologicals TUBA1C Lysates
    Browse Sino Biological Recombinant Proteins
    Browse Sino Biological Cell Lysates
    Browse ProSpec Recombinant Proteins
    Browse Proteins at Cloud-Clone Corp.

     
    Search eBioscience for Proteins for TUBA1C 

    TUBA1C Antibody Products:

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    Abcam antibodies for TUBA1C (P68366, Q9BQE3)
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    TUBA1C Assay Products:

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    Browse ELISAs at Cloud-Clone Corp.
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    Search eBioscience for ELISAs for TUBA1C 


    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    HGNC Gene Families:
    TUB: Tubulins

    Selected InterPro protein domains (see all 7):
     IPR002452 Alpha_tubulin
     IPR000217 Tubulin
     IPR003008 Tubulin_FtsZ_GTPase
     IPR023123 Tubulin_C
     IPR018316 Tubulin/FtsZ_2-layer-sand-dom

    Graphical View of Domain Structure for InterPro Entry Q9BQE3

    ProtoNet protein and cluster: Q9BQE3

    1 Blocks protein domain: IPB002452 Alpha tubulin signature

    UniProtKB/Swiss-Prot: TBA1C_HUMAN, Q9BQE3
    Similarity: Belongs to the tubulin family


    Find genes that share domains with TUBA1C           About GenesLikeMe


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Molecular Function:

         UniProtKB/Swiss-Prot Summary: TBA1C_HUMAN, Q9BQE3
    Function: Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site
    on the beta chain and one at a non-exchangeable site on the alpha chain

         Gene Ontology (GO): 5 molecular function terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003924GTPase activity IEA--
    GO:0005198structural molecule activity TAS12090300
    GO:0005200structural constituent of cytoskeleton IEA--
    GO:0005525GTP binding IEA--
    GO:0019904protein domain specific binding ----
         
    Find genes that share ontologies with TUBA1C           About GenesLikeMe


    Phenotypes:
         6 GenomeRNAi human phenotypes for TUBA1C:
     Cell division defect  Decreased Hepatitis C virus re  Decreased cell number, increas  Decreased viability of wild-ty 
     Increased gamma-H2AX phosphory  Increased number of mitotic ce 

    Animal Models:
       inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for TUBA1C
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       genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for TUBA1C
       genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for TUBA1C

    miRNA
    Products:
        
    miRTarBase miRNAs that target TUBA1C:
    hsa-let-7b-5p (MIRT052239), hsa-mir-324-5p (MIRT043045), hsa-mir-296-3p (MIRT038397), hsa-mir-16-5p (MIRT031663), hsa-mir-92a-3p (MIRT049110), hsa-mir-877-3p (MIRT036933), hsa-mir-760 (MIRT036769), hsa-mir-940 (MIRT036595), hsa-mir-221-3p (MIRT046865)

    Block miRNA regulation of human, mouse, rat TUBA1C using miScript Target Protectors
    Search for qRT-PCR Assays for microRNAs that regulate TUBA1C
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
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    Predesigned siRNA for gene silencing in human, mouse, rat TUBA1C

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for TUBA1C

    Clone
    Products:
         
    OriGene clones in human, mouse for TUBA1C (see all 7)
    OriGene ORF clones in mouse, rat for TUBA1C
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: TUBA1C (NM_032704)
    Sino Biological Human cDNA Clone for TUBA1C
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for TUBA1C
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TUBA1C

    Cell Line
    Products:
         
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    Browse ESI BIO Cell Lines and PureStem Progenitors for TUBA1C 
    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TUBA1C


    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from UniProtKB/Swiss-Prot
    TBA1C_HUMAN, Q9BQE3: Cytoplasm, cytoskeleton
    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    cytoskeleton5
    cytosol3
    nucleus1

    Gene Ontology (GO): 5 cellular component terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm ----
    GO:0005874microtubule TAS12090300
    GO:0005881cytoplasmic microtubule IEA--
    GO:0015630microtubule cytoskeleton ----
    GO:0043234protein complex ----

    Find genes that share ontologies with TUBA1C           About GenesLikeMe


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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    SuperPaths for TUBA1C About   (see all 13)  
    See pathways by source

    SuperPathContained pathways About
    1Development Slit Robo signaling
    Development Slit Robo signaling0.92
    Pathogenic Escherichia coli infection0.41
    Cytoskeleton remodeling Slit Robo signaling0.92
    Neurophysiological process Receptor mediated axon growth repulsion0.41
    Pathogenic Escherichia coli infection0.43
    2Parkin-Ubiquitin Proteasomal System pathway
    Proteolysis Role of Parkin in the Ubiquitin Proteasomal Pathway0.89
    Parkin-Ubiquitin Proteasomal System pathway0.89
    3Cytoplasmic microtubules
    Cytoplasmic microtubules0.32
    Cytoskeleton remodeling Neurofilaments0.32
    4Protein folding
    Chaperonin-mediated protein folding0.91
    Post-chaperonin tubulin folding pathway0.00
    Protein folding0.91
    5Prefoldin mediated transfer of substrate to CCT/TriC
    Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding0.76
    Prefoldin mediated transfer of substrate to CCT/TriC0.72
    Formation of tubulin folding intermediates by CCT/TriC0.76


    Find genes that share SuperPaths with TUBA1C           About GenesLikeMe

    Pathways by source                                                                                                                                                                 See SuperPaths
    Show all pathways


    Selected GeneGo (Thomson Reuters) Pathways for TUBA1C (see all 10)
        Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
    Cell cycle Spindle assembly and chromosome separation
    Regulation of CFTR activity (norm and CF)
    Neurophysiological process Receptor-mediated axon growth repulsion
    Cytoskeleton remodeling Keratin filaments

    2 BioSystems Pathways for TUBA1C
        Parkin-Ubiquitin Proteasomal System pathway
    Pathogenic Escherichia coli infection


    Selected Reactome Pathways for TUBA1C (see all 13)
        Resolution of Sister Chromatid Cohesion
    Prefoldin mediated transfer of substrate to CCT/TriC
    Mitotic Prometaphase
    Translocation of GLUT4 to the plasma membrane
    Recruitment of NuMA to mitotic centrosomes


    3 Kegg Pathways  (Kegg details for TUBA1C):
        Phagosome
    Gap junction
    Pathogenic Escherichia coli infection

        Pathway & Disease-focused RT2 Profiler PCR Array including TUBA1C: 
              Gap Junctions in human mouse rat

    Interactions:

        Search GeneGlobe Interaction Network for TUBA1C

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    Selected Interacting proteins for TUBA1C (Q9BQE32, 3 ENSP000003010724) via UniProtKB, MINT, STRING, and/or I2D (see all 740) (see top 5)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    YWHAQP273482, 3, ENSP000002380814MINT-7900157 I2D: score=1 STRING: ENSP00000238081
    NSFP464592, 3MINT-7947479 I2D: score=1 
    UBA5Q9GZZ92, 3MINT-7947479 I2D: score=1 
    TJP1Q071572, 3, ENSP000002815374MINT-2984901 I2D: score=3 STRING: ENSP00000281537
    CDKN2AP427713, ENSP000003551534I2D: score=1 I2D: score=1 STRING: ENSP00000355153
    SUMO1P631652, 3, ENSP000003760764MINT-7947479 I2D: score=1 STRING: ENSP00000376076
    ACTBP607092, ENSP000003499604MINT-7900157 MINT-7947479 STRING: ENSP00000349960
    MAP1LC3AQ9H4923, ENSP000003639704I2D: score=2 STRING: ENSP00000363970
    MDM2Q009873, ENSP000004172814I2D: score=1 STRING: ENSP00000417281
    SUMO4Q6EEV63, ENSP000003186354I2D: score=1 STRING: ENSP00000318635
    UBCP0CG483, ENSP000003448184I2D: score=1 STRING: ENSP00000344818
    ENSG00000232421P074372, ENSP000004108294MINT-7947479 STRING: ENSP00000410829
    DYRK2Q926303, ENSP000003421054I2D: score=1 STRING: ENSP00000342105
    YWHAZP631042, ENSP000003095034MINT-7900157 STRING: ENSP00000309503
    CDC5LQ994592, ENSP000003605324MINT-7947479 STRING: ENSP00000360532
    MAP1LC3BQ9GZQ83, ENSP000002686074I2D: score=2 STRING: ENSP00000268607
    CKAP5Q140082, ENSP000003465664MINT-7947479 STRING: ENSP00000346566
    MAD1L1Q9Y6D92, ENSP000003825624MINT-7947479 STRING: ENSP00000382562
    BUB1BO605662, ENSP000002875984MINT-7947479 STRING: ENSP00000287598
    MYD88Q998363, ENSP000003796254I2D: score=1 STRING: ENSP00000379625
    EXOSC10Q017802, ENSP000003661354MINT-7947479 STRING: ENSP00000366135
    DYNC1H1Q142042, ENSP000003489654MINT-7947479 STRING: ENSP00000348965
    ATG4CQ96DT63, ENSP000003221594I2D: score=1 STRING: ENSP00000322159
    ATG4BQ9Y4P13, ENSP000003842594I2D: score=1 STRING: ENSP00000384259
    ARHGEF2Q929742, ENSP000003153254MINT-7947479 STRING: ENSP00000315325
    BUB1O436832, ENSP000003025304MINT-7947479 STRING: ENSP00000302530
    BUB3O436842, ENSP000003578584MINT-7947479 STRING: ENSP00000357858
    CCT4P509912, ENSP000003779584MINT-7947479 STRING: ENSP00000377958
    CCT7Q998322, ENSP000002580914MINT-7947479 STRING: ENSP00000258091
    CLASP1Q7Z4602, ENSP000002637104MINT-7947479 STRING: ENSP00000263710
    DYNC1LI1Q9Y6G92, ENSP000002731304MINT-7947479 STRING: ENSP00000273130
    DYNC1LI2O432372, ENSP000002581984MINT-7947479 STRING: ENSP00000258198
    EEF1A1P681042MINT-7900157 MINT-7947479
    HSPB1P047922MINT-7900157 MINT-7947479
    MYH9P355792MINT-7900157 MINT-7947479
    PFKPQ018132, ENSP000003705174MINT-7947479 STRING: ENSP00000370517
    PRKDCP785272MINT-7900157 MINT-7947479
    PUM1Q146712, ENSP000003917234MINT-7947479 STRING: ENSP00000391723
    SNW1Q135732, ENSP000002615314MINT-7947479 STRING: ENSP00000261531
    TUBB4BP683712, ENSP000003412894MINT-7947479 STRING: ENSP00000341289
    YWHAEP622582MINT-7900157 MINT-7947479
    NF2P352403I2D: score=3 
    UFL1O948743I2D: score=3 
    GABARAPO951663I2D: score=2 
    GABARAPL1Q9H0R83I2D: score=2 
    NOTCH2Q047213I2D: score=2 
    AMBRA1Q9C0C73I2D: score=1 
    ARRB1P494073I2D: score=1 
    ARRB2P321213I2D: score=1 
    ATG10Q9H0Y03I2D: score=1 
    ATG101Q9BSB43I2D: score=1 
    ATG12O948173I2D: score=1 
    ATG13O751433I2D: score=1 
    ATG14Q6ZNE53I2D: score=1 
    ATG16L1Q676U53I2D: score=1 
    ATG2AQ2TAZ03I2D: score=1 
    ATG3Q9NT623I2D: score=1 
    ATG5Q9H1Y03I2D: score=1 
    ATG7O953523I2D: score=1 
    BECN1Q144573I2D: score=1 
    CACNB4O003053I2D: score=1 
    CAMKK2Q96RR43I2D: score=1 
    CASKO149363I2D: score=1 
    CLN3Q132863I2D: score=1 
    CTNNBL1Q8WYA63I2D: score=1 
    DDA1Q9BW613I2D: score=1 
    DDIT3P356383I2D: score=1 
    DLG4P783523I2D: score=1 
    FOXO3O435243I2D: score=1 
    FYCO1Q9BQS83I2D: score=1 
    GABARAPL2P605203I2D: score=1 
    GBASO753233I2D: score=1 
    GIT1Q9Y2X73I2D: score=1 
    GOSR1O952493I2D: score=1 
    GRIA2P422623I2D: score=1 
    HIF1AQ166653I2D: score=1 
    IL7RP168713I2D: score=1 
    KBTBD7Q8WVZ93I2D: score=1 
    KCND2Q9NZV83I2D: score=1 
    KLHDC10Q6PID83I2D: score=1 
    MAP1LC3CQ9BXW43I2D: score=1 
    MLST8Q9BVC43I2D: score=1 
    NCAM2O153943I2D: score=1 
    NEK9Q8TD193I2D: score=1 
    NRBF2Q96F243I2D: score=1 
    NSMAFQ926363I2D: score=1 
    PDPK1O155303I2D: score=1 
    PIK3C2AO004433I2D: score=1 
    PIK3C3Q8NEB93I2D: score=1 
    PIK3CGP487363I2D: score=1 
    PRKAA1Q131313I2D: score=1 
    PRKAA2P546463I2D: score=1 
    PRKAB1Q9Y4783I2D: score=1 
    PRKAB2O437413I2D: score=1 
    PRKAG1P546193I2D: score=1 
    PRKAG2Q9UGJ03I2D: score=1 
    RAB24Q969Q53I2D: score=1 
    RABGAP1Q9Y3P93I2D: score=1 
    RASSF5Q8WWW03I2D: score=1 
    RB1CC1Q8TDY23I2D: score=1 
    SH3GLB1Q9Y3713I2D: score=1 
    SH3GLB2Q9NR463I2D: score=1 
    SQSTM1Q135013I2D: score=1 
    STK11Q158313I2D: score=1 
    STK3Q131883I2D: score=1 
    STK4Q130433I2D: score=1 
    SYPP082473I2D: score=1 
    TECPR1Q7Z6L13I2D: score=1 
    TRAF2Q129333I2D: score=1 
    ULK1O753853I2D: score=1 
    ULK2Q8IYT83I2D: score=1 
    UVRAGQ9P2Y53I2D: score=1 
    WDR45Q9Y4843I2D: score=1 
    WIPI1Q5MNZ93I2D: score=1 
    WIPI2Q9Y4P83I2D: score=1 
    ABCF1Q8NE712MINT-7947479
    ABCF3Q9NUQ82MINT-7947479
    ACTA2P627362MINT-7900157
    ACTL6AO960192MINT-7947479
    ACTR1AP611632MINT-7947479
    ACTR2P611602MINT-7947479
    ADNPQ9H2P02MINT-7947479
    AHNAKQ096662MINT-7947479
    AKAP8O438232MINT-7947479
    ANAPC1Q9H1A42MINT-7947479
    ANAPC2Q9UJX62MINT-7947479
    ANAPC7Q9UJX32MINT-7947479
    ANKRD18AQ8IVF62MINT-7900157
    ANLNQ9NQW62MINT-7947479
    ANXA11P509952MINT-7947479
    AP1B1Q105672MINT-7947479
    ARCN1P484442MINT-7947479
    ARGLU1Q9NWB62MINT-7947479
    ARHGEF1Q928882MINT-7947479
    ARID1AO144972MINT-7947479
    ATP5A1P257052MINT-7900157
    ATP5BP065762MINT-7900157
    AURKBQ96GD42MINT-7947479
    BAZ1AQ9NRL22MINT-7947479
    BCAS2O759342MINT-7947479
    BCLAF1Q9NYF82MINT-7947479
    BIDP559572MINT-7947479
    BRD2P254402MINT-7947479
    BRD4O608852MINT-7947479
    BRD7Q9NPI12MINT-7947479
    BRD8Q9H0E92MINT-7947479
    BTAF1O149812MINT-7947479
    BZW1Q7L1Q62MINT-7947479
    C7orf13Q8NI282MINT-7947479
    CAPGP401212MINT-7947479
    CAPZA1P529072MINT-7947479
    CARD10Q9BWT72MINT-7947479
    CASC5Q8NG312MINT-7947479
    CCNB1P146352MINT-7947479
    CCT2P783712MINT-7947479
    CCT3P493682MINT-7947479
    CCT5P486432MINT-7947479
    CCT6AP402272MINT-7947479
    CCT8P509902MINT-7947479
    CDC16Q130422MINT-7947479
    CDC20Q128342MINT-7947479
    CDC23Q9UJX22MINT-7947479
    CDC27P302602MINT-7947479
    CDC73Q6P1J92MINT-7947479
    CDK9P507502MINT-7947479
    CDKN2AIPQ9NXV62MINT-7947479
    CHD1LQ86WJ12MINT-7947479
    CHD8Q9HCK82MINT-7947479
    CHEK1O147572MINT-7947479
    CLINT1Q146772MINT-7947479
    CNOT10Q9H9A52MINT-7947479
    CNOT3O751752MINT-7947479
    COPAP536212MINT-7947479
    COPB1P536182MINT-7947479
    COPB2P356062MINT-7947479
    COPG1Q9Y6782MINT-7947479
    COPG2Q9UBF22MINT-7947479
    COPS5Q929052MINT-7947479
    CPS1P313272MINT-7900157
    CPSF2Q9P2I02MINT-7947479
    CPSF3Q9UKF62MINT-7947479
    CPSF7Q8N6842MINT-7947479
    CSE1LP550602MINT-7947479
    CSTF3Q129962MINT-7947479
    CTNND1O607162MINT-7947479
    CUL1Q136162MINT-7947479
    CWC15Q9P0132MINT-7947479
    DCTN2Q135612MINT-7947479
    DDB1Q165312MINT-7947479
    DDX17Q928412MINT-7947479
    DDX19AQ9NUU72MINT-7947479
    DDX19BQ9UMR22MINT-7947479
    DDX39AO001482MINT-7947479
    DDX39BQ138382MINT-7947479
    DDX3XO005712MINT-7947479
    DDX41Q9UJV92MINT-7947479
    DDX42Q86XP32MINT-7947479
    DDX47Q9H0S42MINT-7947479
    DDX5P178442MINT-7947479
    DDX6P261962MINT-7947479
    DEPDC7Q96QD52MINT-7947479
    DFNA5O604432MINT-7947479
    DIAPH1O606102MINT-7947479
    DIDO1Q9BTC02MINT-7947479
    DMAP1Q9NPF52MINT-7947479
    DNAJA1P316892MINT-7947479
    DNM1LO004292MINT-7947479
    DNM2P505702MINT-7947479
    DOCK5Q9H7D02MINT-7947479
    DOCK8Q8NF502MINT-7947479
    DRG1Q9Y2952MINT-7947479
    DSPP159242MINT-7947479
    DTYMKP239192MINT-7947479
    ECT2Q9H8V32MINT-7947479
    EDC4Q6P2E92MINT-7947479
    EFTUD2Q150292MINT-7947479
    EHD1Q9H4M92MINT-7947479
    EHD4Q9H2232MINT-7947479
    EHMT1Q9H9B12MINT-7947479
    EIF2B4Q9UI102MINT-7947479
    EIF2DP412142MINT-7947479
    EIF2S3P410912MINT-7947479
    EIF3BP558842MINT-7947479
    EIF3GO758212MINT-7947479
    EIF3IQ133472MINT-7947479
    EIF4A1P608422MINT-7947479
    EIF4A2Q142402MINT-7947479
    EIF4A3P389192MINT-7947479
    EIF4G2P783442MINT-7947479
    EIF5BO608412MINT-7947479
    ELAVL1Q157172MINT-7947479
    ELF2Q157232MINT-7947479
    ENAHQ8N8S72MINT-7947479
    ENSG00000183311P074372MINT-7947479
    ENSG00000206289P287022MINT-7947479
    ENSG00000206490Q8NE712MINT-7947479
    ENSG00000215077P254402MINT-7947479
    ENSG00000215425Q138382MINT-7947479
    ENSG00000224156P074372MINT-7947479
    ENSG00000225073Q138382MINT-7947479
    ENSG00000225859Q138382MINT-7947479
    ENSG00000225989Q8NE712MINT-7947479
    ENSG00000227322P287022MINT-7947479
    ENSG00000227739P074372MINT-7947479
    ENSG00000228333P287022MINT-7947479
    ENSG00000229496Q138382MINT-7947479
    ENSG00000229684P074372MINT-7947479
    ENSG00000230624Q138382MINT-7947479
    ENSG00000231129Q8NE712MINT-7947479
    ENSG00000231321P287022MINT-7947479
    ENSG00000232169Q8NE712MINT-7947479
    ENSG00000232575P074372MINT-7947479
    ENSG00000234507P254402MINT-7947479
    ENSG00000234704P254402MINT-7947479
    ENSG00000235067P074372MINT-7947479
    ENSG00000235307P254402MINT-7947479
    ENSG00000235439Q138382MINT-7947479
    ENSG00000235712P287022MINT-7947479
    ENSG00000236149Q8NE712MINT-7947479
    ENSG00000236342Q8NE712MINT-7947479
    EPB41L3Q9Y2J22MINT-7947479
    EPPK1P581072MINT-7947479
    EPS8L2Q9H6S32MINT-7947479
    ERAL1O756162MINT-7947479
    ERCC1P079922MINT-7947479
    ERCC6LQ2NKX82MINT-7947479
    ETF1P624952MINT-7947479
    ETV6P412122MINT-7947479
    EWSR1Q018442MINT-7947479
    EXOC2Q96KP12MINT-7947479
    EXOC4Q96A652MINT-7947479
    EXOC5O004712MINT-7947479
    EXOC7Q9UPT52MINT-7947479
    FAF1Q9UNN52MINT-7947479
    FAM129BQ96TA12MINT-7947479
    FANCD2Q9BXW92MINT-7947479
    FANCIQ9NVI12MINT-7947479
    FASNP493272MINT-7947479
    FEN1P397482MINT-7947479
    FERMT1Q9BQL62MINT-7947479
    FHOD1Q9Y6132MINT-7947479
    FUSP356372MINT-7947479
    GAPDHP044062MINT-7947479
    GATAD2AQ86YP42MINT-7947479
    GCN1L1Q926162MINT-7947479
    GEMIN4P576782MINT-7947479
    GEMIN6Q8WXD52MINT-7947479
    GMPSP499152MINT-7947479
    GNASP630922MINT-7947479
    GNB3P165202MINT-7947479
    GOLGB1Q147892MINT-7947479
    GPS2Q132272MINT-7947479
    GTF2IP783472MINT-7947479
    GTF3C2Q8WUA42MINT-7947479
    GTF3C5Q9Y5Q82MINT-7947479
    GTPBP1O001782MINT-7947479
    GULP1Q9UBP92MINT-7947479
    H1F0P073052MINT-7900157
    HAUS7Q998712MINT-7947479
    HBS1LQ9Y4502MINT-7947479
    HDAC1Q135472MINT-7947479
    HDAC2Q927692MINT-7947479
    HDLBPQ003412MINT-7947479
    HELLSQ9NRZ92MINT-7947479
    HIC2Q96JB32MINT-7947479
    HIP1RO751462MINT-7947479
    HIRAP541982MINT-7947479
    HIST1H2BDP588762MINT-7900157
    HIST1H4AP628052MINT-7900157
    HIST1H4BP628052MINT-7900157
    HIST1H4CP628052MINT-7900157
    HIST1H4DP628052MINT-7900157
    HIST1H4EP628052MINT-7900157
    HIST1H4FP628052MINT-7900157
    HIST1H4HP628052MINT-7900157
    HIST1H4IP628052MINT-7900157
    HIST1H4JP628052MINT-7900157
    HIST1H4KP628052MINT-7900157
    HIST1H4LP628052MINT-7900157
    HIST2H4AP628052MINT-7900157
    HIST2H4BP628052MINT-7900157
    HIST4H4P628052MINT-7900157
    HLTFQ145272MINT-7947479
    HMGCS2P548682MINT-7900157
    HNRNPA2B1P226262MINT-7947479
    HNRNPCP079102MINT-7947479
    HNRNPFP525972MINT-7947479
    HNRNPH1P319432MINT-7947479
    HNRNPKP619782MINT-7947479
    HNRNPMP522722MINT-7947479
    HNRNPUQ008392MINT-7947479
    HSP90AA1P079002MINT-7947479
    HSP90AB1P082382MINT-7947479
    HSP90B1P146252MINT-7947479
    HSPA12AO433012MINT-7947479
    HSPA5P110212MINT-7947479
    HSPA6P170662MINT-7947479
    HSPA8P111422MINT-7947479
    HSPD1P108092MINT-7947479
    HUWE1Q7Z6Z72MINT-7947479
    IKBKAPO951632MINT-7947479
    ILF2Q129052MINT-7947479
    INTS1Q8N2012MINT-7947479
    INTS3Q68E012MINT-7947479
    INTS6Q9UL032MINT-7947479
    INTS8Q75QN22MINT-7947479
    IPO5O004102MINT-7947479
    IPO7O953732MINT-7947479
    IPO9Q96P702MINT-7947479
    IQGAP1P469402MINT-7947479
    ITPK1Q135722MINT-7947479
    KANSL1Q7Z3B32MINT-7947479
    KDM1AO603412MINT-7947479
    KHDRBS1Q076662MINT-7947479
    KIF11P527322MINT-7947479
    KIF21AQ7Z4S62MINT-7947479
    KIF2CQ996612MINT-7947479
    KIF4AO952392MINT-7947479
    KPNA2P522922MINT-7947479
    KPNB1Q149742MINT-7947479
    KRT17Q046952MINT-7900157
    KRT8P057872MINT-7900157
    LAS1LQ9Y4W22MINT-7947479
    LENG9Q96B702MINT-7947479
    LIMS1P480592MINT-7947479
    LMNAP025452MINT-7947479
    LMO7Q8WWI12MINT-7947479
    LRRC1Q9BTT62MINT-7947479
    LRRC40Q9H9A62MINT-7947479
    LRWD1Q9UFC02MINT-7947479
    MAGEE2Q8TD902MINT-7947479
    MAP2K4P459852MINT-7947479
    MAP2K7O147332MINT-7947479
    MAP7Q142442MINT-7947479
    MARK2Q7KZI72MINT-7947479
    MATR3P432432MINT-7947479
    MDN1Q9NU222MINT-7947479
    MED12Q930742MINT-7947479
    MED12LQ86YW92MINT-7947479
    MED16Q9Y2X02MINT-7947479
    MED4Q9NPJ62MINT-7947479
    MELKQ146802MINT-7947479
    MPP2Q141682MINT-7947479
    MRE11AP499592MINT-7947479
    MSH2P432462MINT-7947479
    MSH6P527012MINT-7947479
    MTA2O947762MINT-7947479
    MTA3Q9BTC82MINT-7947479
    MTCL1Q9Y4B52MINT-7947479
    MVPQ147642MINT-7947479
    MYBBP1AQ9BQG02MINT-7947479
    MYH13Q9UKX32MINT-7900157
    MYH7P128832MINT-7900157
    MYL3P085902MINT-7900157
    MYLK2Q9H1R32MINT-7900157
    MYO15BQ96JP22MINT-7947479
    NACC1Q96RE72MINT-7947479
    NAT10Q9H0A02MINT-7947479
    NBNO609342MINT-7947479
    NCAPD2Q150212MINT-7947479
    NCAPHQ150032MINT-7947479
    NCOR1O753762MINT-7947479
    NDC80O147772MINT-7947479
    NELFBQ8WX922MINT-7947479
    NF1P213592MINT-7947479
    NIPBLQ6KC792MINT-7947479
    NONOQ152332MINT-7947479
    NPM1P067482MINT-7947479
    NRG1Q022972MINT-7947479
    NSUN5Q96P112MINT-7947479
    NUDCQ9Y2662MINT-7947479
    NUDT21O438092MINT-7947479
    NUF2Q9BZD42MINT-7947479
    NUP107P577402MINT-7947479
    NUP155O756942MINT-7947479
    NUP93Q8N1F72MINT-7947479
    ORC2Q134162MINT-7947479
    ORC3Q9UBD52MINT-7947479
    OXSR1O957472MINT-7947479
    PAK4O960132MINT-7947479
    PARP1P098742MINT-7947479
    PARVAQ9NVD72MINT-7947479
    PARVBQ9HBI12MINT-7947479
    PCBP1Q153652MINT-7947479
    PCBP2Q153662MINT-7947479
    PCNTO956132MINT-7947479
    PDLIM7Q9NR122MINT-7947479
    PELOQ9BRX22MINT-7947479
    PFKMP082372MINT-7947479
    PHGDHO431752MINT-7947479
    PICALMQ134922MINT-7947479
    PKN2Q165132MINT-7947479
    PLECQ151492MINT-7947479
    PLK1P533502MINT-7947479
    PLRG1O436602MINT-7947479
    PNNQ9H3072MINT-7947479
    POLD1P283402MINT-7947479
    POLR1CO151602MINT-7947479
    POLR3DP054232MINT-7947479
    POLR3EQ9NVU02MINT-7947479
    PPFIA1Q131362MINT-7947479
    PPM1DO152972MINT-7947479
    PPP1CAP621362MINT-7947479
    PPP2R1AP301532MINT-7947479
    PRCCQ927332MINT-7947479
    PRPF19Q9UMS42MINT-7947479
    PRPF3O433952MINT-7947479
    PRPF4BQ135232MINT-7947479
    PRPF6O949062MINT-7947479
    PRPF8Q6P2Q92MINT-7947479
    PSMC1P621912MINT-7947479
    PSMC2P359982MINT-7947479
    PSMC3P179802MINT-7947479
    PSMC4P436862MINT-7947479
    PSMC5P621952MINT-7947479
    PSMC6P623332MINT-7947479
    PSMD1Q994602MINT-7947479
    PSMD11O002312MINT-7947479
    PSMD12O002322MINT-7947479
    PSMD13Q9UNM62MINT-7947479
    PSMD2Q132002MINT-7947479
    PSMD3O432422MINT-7947479
    PSTPIP2Q9H9392MINT-7947479
    PTBP1P265992MINT-7947479
    PTBP2Q9UKA92MINT-7947479
    PTBP3O957582MINT-7947479
    RACGAP1Q9H0H52MINT-7947479
    RAD18Q9NS912MINT-7947479
    RAD50Q928782MINT-7947479
    RALYQ9UKM92MINT-7947479
    RANBP2P497922MINT-7947479
    RANGAP1P460602MINT-7947479
    RAVER1Q8IY672MINT-7947479
    RBBP4Q090282MINT-7947479
    RBBP5Q152912MINT-7947479
    RBBP7Q165762MINT-7947479
    RBM17Q96I252MINT-7947479
    RBM39Q144982MINT-7947479
    RBM4Q9BWF32MINT-7947479
    RBM45Q8IUH32MINT-7947479
    RBM7Q9Y5802MINT-7947479
    RBMXP381592MINT-7947479
    RCOR1Q9UKL02MINT-7947479
    RFC2P352502MINT-7947479
    RFC3P409382MINT-7947479
    RFC4P352492MINT-7947479
    RFC5P409372MINT-7947479
    RFX1P226702MINT-7947479
    RFX5P483822MINT-7947479
    RIF1Q5UIP02MINT-7947479
    RNF130Q86XS82MINT-7947479
    RNF17Q9BXT82MINT-7947479
    ROCK2O751162MINT-7947479
    RPL13P263732MINT-7947479
    RPL22P352682MINT-7947479
    RPL24P837312MINT-7947479
    RPL31P628992MINT-7947479
    RPLP0P053882MINT-7947479
    RPS13P622772MINT-7947479
    RPS6KA4O756762MINT-7947479
    RPS6KB2Q9UBS02MINT-7947479
    RTCBQ9Y3I02MINT-7947479
    RUVBL1Q9Y2652MINT-7947479
    RUVBL2Q9Y2302MINT-7947479
    RXRBP287022MINT-7947479
    SART1O432902MINT-7947479
    SCAF8Q9UPN62MINT-7947479
    SCRIBQ141602MINT-7947479
    SCYL2Q6P3W72MINT-7947479
    SEC23AQ154362MINT-7947479
    SEC24CP539922MINT-7947479
    SEH1LQ96EE32MINT-7947479
    SENP3Q9H4L42MINT-7947479
    SEPT9Q9UHD82MINT-7947479
    SETXQ7Z3332MINT-7947479
    SF3A1Q154592MINT-7947479
    SF3A2Q154282MINT-7947479
    SF3A3Q128742MINT-7947479
    SF3B1O755332MINT-7947479
    SF3B2Q134352MINT-7947479
    SF3B3Q153932MINT-7947479
    SF3B6Q9Y3B42MINT-7947479
    SFNP319472MINT-7900157
    SFPQP232462MINT-7947479
    SHC1P293532MINT-7947479
    SHROOM3Q8TF722MINT-7947479
    SIN3AQ96ST32MINT-7947479
    SKIV2L2P422852MINT-7947479
    SMARCA5O602642MINT-7947479
    SMARCAD1Q9H4L72MINT-7947479
    SMARCB1Q128242MINT-7947479
    SMARCC1Q929222MINT-7947479
    SMARCC2Q8TAQ22MINT-7947479
    SMARCD1Q96GM52MINT-7947479
    SMARCE1Q969G32MINT-7947479
    SMC1AQ146832MINT-7947479
    SMC2O953472MINT-7947479
    SMC3Q9UQE72MINT-7947479
    SMC4Q9NTJ32MINT-7947479
    SMCHD1A6NHR92MINT-7947479
    SMN1Q166372MINT-7947479
    SMN2Q166372MINT-7947479
    SNAPC4Q5SXM22MINT-7947479
    SNRNP200O756432MINT-7947479
    SNRNP40Q96DI72MINT-7947479
    SNRNP70P086212MINT-7947479
    SNRPAP090122MINT-7947479
    SNRPA1P096612MINT-7947479
    SNRPD1P623142MINT-7947479
    SNRPD3P623182MINT-7947479
    SNRPEP623042MINT-7947479
    SNX12Q9UMY42MINT-7947479
    SNX2O607492MINT-7947479
    SPATA5Q8NB902MINT-7947479
    SPENQ96T582MINT-7947479
    SPTAN1Q138132MINT-7947479
    SPTBN1Q010822MINT-7947479
    SREK1Q8WXA92MINT-7947479
    SRP54P610112MINT-7947479
    SRP68Q9UHB92MINT-7947479
    SRP72O760942MINT-7947479
    SRRM1Q8IYB32MINT-7947479
    SRSF1Q079552MINT-7947479
    SRSF4Q081702MINT-7947479
    SRSF7Q166292MINT-7947479
    SSUH2Q9Y2M22MINT-7947479
    STAB1Q9NY152MINT-7947479
    STAG2Q8N3U42MINT-7947479
    STAT3P407632MINT-7947479
    STK24Q9Y6E02MINT-7947479
    SUGT1Q9Y2Z02MINT-7947479
    SUPT16HQ9Y5B92MINT-7947479
    SYMPKQ927972MINT-7947479
    TAF15Q928042MINT-7947479
    TAF5LO755292MINT-7947479
    TANC2Q9HCD62MINT-7947479
    TARDBPQ131482MINT-7947479
    TBL1XR1Q9BZK72MINT-7947479
    TCP1P179872MINT-7947479
    THAP1Q9NVV92MINT-7947479
    THRAP3Q9Y2W12MINT-7947479
    TIAL1Q010852MINT-7947479
    TLN1Q9Y4902MINT-7947479
    TLN2Q9Y4G62MINT-7947479
    TMOD3Q9NYL92MINT-7947479
    TMPOP421662MINT-7947479
    TNFAIP2Q031692MINT-7947479
    TNKS1BP1Q9C0C22MINT-7947479
    TNPO1Q929732MINT-7947479
    TPRP122702MINT-7947479
    TPX2Q9ULW02MINT-7947479
    TRAP1Q129312MINT-7947479
    TRIM21P194742MINT-7947479
    TRIM28Q132632MINT-7947479
    TRIP13Q156452MINT-7947479
    TRMT1LQ7Z2T52MINT-7947479
    TRRAPQ9Y4A52MINT-7947479
    TRUB1Q8WWH52MINT-7947479
    TSG101Q998162MINT-7947479
    TUBA4AP683662MINT-7947479
    TUBBP074372MINT-7947479
    TUBG1P232582MINT-7947479
    TUBGCP2Q9BSJ22MINT-7947479
    TUBGCP3Q96CW52MINT-7947479
    TUBGCP4Q9UGJ12MINT-7947479
    TUT1Q9H6E52MINT-7900157
    TWF1Q127922MINT-7947479
    U2AF1Q010812MINT-7947479
    U2AF2P263682MINT-7947479
    U2SURPO150422MINT-7947479
    UBE2MP610812MINT-7947479
    UBE2NP610882MINT-7947479
    UBE2SQ167632MINT-7947479
    UBL4AP114412MINT-7947479
    UBN1Q9NPG32MINT-7947479
    UCHL5Q9Y5K52MINT-7947479
    UMPSP111722MINT-7947479
    UNC45AQ9H3U12MINT-7947479
    UPF1Q929002MINT-7947479
    UPF2Q9HAU52MINT-7947479
    USO1O607632MINT-7947479
    USP10Q146942MINT-7947479
    USP24Q9UPU52MINT-7947479
    USP39Q53GS92MINT-7947479
    VIMP086702MINT-7947479
    VPS33AQ96AX12MINT-7947479
    VPS33BQ9H2672MINT-7947479
    VPS36Q86VN12MINT-7947479
    VPS51Q9UID32MINT-7947479
    WDR18Q9BV382MINT-7947479
    WDR33Q9C0J82MINT-7947479
    WNK4Q96J922MINT-7900157
    WRNIP1Q96S552MINT-7947479
    XPO5Q9HAV42MINT-7947479
    XRN2Q9H0D62MINT-7947479
    YEATS4O956192MINT-7947479
    YLPM1P497502MINT-7947479
    YWHABP319462MINT-7900157
    ZBTB7CA1YPR02MINT-7947479
    ZC3HC1Q86WB02MINT-7947479
    ZNF638Q149662MINT-7947479
    DYNC1I1ENSP000003201304STRING: ENSP00000320130
    DYNC1I2ENSP000003803084STRING: ENSP00000380308
    GJA1ENSP000002825614STRING: ENSP00000282561
    TUBB1ENSP000002171334STRING: ENSP00000217133
    TUBB2AENSP000003697034STRING: ENSP00000369703
    TUBB2BENSP000002598184STRING: ENSP00000259818
    TUBB4AENSP000002640714STRING: ENSP00000264071
    About this table

    Gene Ontology (GO): Selected biological process terms (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000226microtubule cytoskeleton organization ----
    GO:0006184GTP catabolic process ----
    GO:0006457protein folding TAS--
    GO:0007017microtubule-based process TAS12090300
    GO:0030705cytoskeleton-dependent intracellular transport TAS12090300

    Find genes that share ontologies with TUBA1C           About GenesLikeMe



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Compounds for TUBA1C available from Tocris Bioscience    About this table
    CompoundAction CAS #
    Vinorelbine ditartrateSelective mitotic microtubule antagonist[125317-39-7]
    DocetaxelMicrotubule stabilizer[114977-28-5]
    Vinblastine sulfateDisrupts microtubules[143-67-9]
    ColchicineInhibitor of tubulin[64-86-8]
    Epothilone BMicrotubule stabilization agent; promotes tubulin polymerization[152044-54-7]

    1 HMDB Compound for TUBA1C    About this table
    CompoundSynonyms CAS #PubMed Ids
    Guanosine triphosphate5'-GTP (see all 10)86-01-1--

    3 DrugBank Compounds for TUBA1C    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Epothilone BEPO 906 (see all 3)152044-54-7target--17139284 17016423
    Epothilone D-- 189453-10-9target--17139284 17016423
    2-MERCAPTO-N-[1,2,3,10-TETRAMETHOXY-9-OXO-5,6,7,9-TETRAHYDRO-BENZO[A]HEPTALEN-7-YL]ACETAMIDE-- --target--10592235



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
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    REFSEQ mRNAs for TUBA1C gene: 
    NM_032704.3  

    Unigene Cluster for TUBA1C:

    Tubulin, alpha 1c
    Hs.652390  [show with all ESTs]
    Unigene Representative Sequence: AK293589
    9 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000549554 ENST00000550574 ENST00000541364(uc010smh.1) ENST00000549818
    ENST00000552448 ENST00000552125 ENST00000301072(uc001rtt.1) ENST00000549183
    ENST00000548470
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    Additional mRNA sequence: 

    AK223024.1 AK293589.1 BC004949.1 BC005946.1 BC011790.1 BC019298.2 BC021088.1 BC033064.1 
    BC051297.1 BC063036.1 D28390.1 

    Selected DOTS entries (see all 170):

    DT.95214022  DT.100744545  DT.99926617  DT.100744301  DT.100842020  DT.100744421  DT.121136664  DT.95320022 
    DT.92475285  DT.100744242  DT.100744456  DT.97869896  DT.92475277  DT.121136256  DT.95174359  DT.121136350 
    DT.121134955  DT.100856215  DT.92475321  DT.92475326  DT.98083143  DT.100744540  DT.121134834  DT.97869904 

    19 AceView cDNA sequences:

    BC021088 CR610386 CR595837 CR599151 CR599275 BC011790 D28390 CR599812 
    CR624182 CR603141 BC019298 BC051297 CR613152 CR605574 BC063036 BC004949 
    BC005946 NM_032704 BC033064 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

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    TUBA1C expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: GCTGCCCTTG
    TUBA1C Expression
    About this image


    TUBA1C expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database
     selected tissues (see all 18) fully expand
     
     Brain (Nervous System)
             Cerebral Cortex
     
     Bone (Muscoskeletal System)
             Bone Marrow
     
     Endoderm (Gastrulation Derivatives)
             Endoderm-like cells
     
     Colon (Gastrointestinal Tract)
     
     Uterus (Reproductive System)
    TUBA1C Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    TUBA1C Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.652390
        Pathway & Disease-focused RT2 Profiler PCR Array including TUBA1C: 
              Gap Junctions in human mouse rat

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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TUBA1C

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of eukaryotes.

    Orthologs for TUBA1C gene from Selected species (see all 23)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Tuba1c1 , 5 tubulin, alpha 1C1, 5 93.76(n)1
    99.33(a)1
      15 (55.61 cM)5
    221461  NM_009448.41  NP_033474.11 
     990298915 
    chicken
    (Gallus gallus)
    Aves LOC1008572471 tubulin alpha-5 chain-like 84.3(n)
    95.98(a)
      100857247  XM_004942841.1  XP_004942898.1 
    lizard
    (Anolis carolinensis)
    Reptilia TUBA1C6
    tubulin, alpha 1c
    99(a)
    1 ↔ 1
    GL343198.1(2510602-2522950)
    African clawed frog
    (Xenopus laevis)
    Amphibia BC046841.12   -- 86.81(n)    BC046841.1 
    zebrafish
    (Danio rerio)
    Actinopterygii tuba1b1 tubulin, alpha 1b 85.23(n)
    98(a)
      373080  NM_194388.2  NP_919369.2 
    fruit fly
    (Drosophila melanogaster)
    Insecta alphaTub84B1 alpha-Tubulin at 84B 82.33(n)
    96.88(a)
      40848  NM_057424.4  NP_476772.1 
    worm
    (Caenorhabditis elegans)
    Secernentea tba-21 tba-2 75.76(n)
    88.37(a)
      173167  NM_001025879.3  NP_001021050.1 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes TUB11 TUB1 64.87(n)
    74.83(a)
      854889   NP_013625.1 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons TUA21 TUA2 75.28(n)
    85.75(a)
      841425  NM_103889.3  NP_175423.1 
    rice
    (Oryza sativa)
    Liliopsida Os.95042 O.sativa mRNA for alpha-tubulin (clone OSTA-274) 79.93(n)    AK069140.1 


    ENSEMBL Gene Tree for TUBA1C (if available)
    TreeFam Gene Tree for TUBA1C (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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    Paralogs for TUBA1C gene
    TUBA3C2  TUBA4A2  TUBA1B2  TUBA1A2  TUBA3E2  TUBA82  TUBA3D2  
    Selected SIMAP similar genes for TUBA1C using alignment to 6 protein entries:     TBA1C_HUMAN (see all proteins) (see all similar genes):
    TUBA1    TUBA4B    TUBA1A    TUBA4A    FP1523    ZNF114
    TUBA1B    NDUFS3    PUS1    TUBA2    TUBA3C    TUBA3D
    TUBA3E    NLN    PACRG    SH2B3    TM4SF19    TUBA8

    Find genes that share paralogs with TUBA1C           About GenesLikeMe


    3 Pseudogenes.org Pseudogenes for TUBA1C
    PGOHUM00000244008 PGOHUM00000261295 PGOHUM00000244705


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for TUBA1C (see all 168)    About this table                                 

    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 12 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1907773521,2
    C--49493631(+) AGATCG/TCACCA 1 -- int10--------
    rs23354521,2
    C,F,A,H--49493648(-) GTCTCG/CCTGGA 1 -- int16Minor allele frequency- C:0.03NS EA NA 632
    rs1397223061,2
    --49493673(+) ACGTAC/TATGAA 1 -- int10--------
    rs1831612351,2
    --49493676(+) TACATG/TAATTT 1 -- int10--------
    rs733062631,2
    C,F--49493707(+) AATACA/TTGTAT 1 -- int13Minor allele frequency- T:0.06WA CSA 122
    rs111689481,2
    C,F,A,H--49493751(+) AAGCAG/ATACCA 1 -- int120Minor allele frequency- A:0.19NS EA NA WA CSA 2338
    rs123100931,2
    C,F--49494033(+) AATTGC/GGGGCG 1 -- int11Minor allele frequency- G:0.06WA 118
    rs1443831061,2
    --49494160(+) GCTTTC/TTGGGG 1 -- int10--------
    rs1461111731,2
    C--49494238(+) CCCAGC/TACTTT 1 -- int10--------
    rs1880015591,2
    --49494252(+) AGGCCA/GAGGTG 1 -- int10--------

    HapMap Linkage Disequilibrium report for TUBA1C (49582519 - 49667114 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 2 variations for TUBA1C:    About this table    
    Variant IDTypeSubtypePubMed ID
    nsv507642CNV Insertion20534489
    nsv509466CNV Insertion20534489

    Site Specific Mutation Identification with PCR Assays
    SeqTarget long-range PCR primers for resequencing TUBA1C
    DNA2.0 Custom Variant and Variant Library Synthesis for TUBA1C

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

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    2 diseases for TUBA1C:    
    About MalaCards
    distal hereditary motor neuropathy, type ii    osteoblastoma

    1 disease from the University of Copenhagen DISEASES database for TUBA1C:
    Osteoblastoma

    Find genes that share disorders with TUBA1C           About GenesLikeMe

    Genetic Association Database (GAD): TUBA1C

    Export disorders for TUBA1C gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for TUBA1C gene, integrated from 10 sources (see all 86):
    (articles sorted by number of sources associating them with TUBA1C)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)1, 2 Olsen J.V....Mann M. (Cell 2006)
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S.... Malek J. (Genome Res. 2004)
    3. Construction of a human full-length cDNA bank. (PubMed id 7821789)1, 3 Kato S....Aoki T. (Gene 1994)
    4. The intracellular interactome of tetraspanin-enriched microdomains reveals their function as sorting machineries toward exosomes. (PubMed id 23463506)1 Perez-Hernandez D....YA!A+ez-MA^ M. (J. Biol. Chem. 2013)
    5. Quantitative study of the interactome of PKCIP involved in the EGF-induced tumor cell chemotaxis. (PubMed id 23402259)1 Chen R....Zhang N. (J. Proteome Res. 2013)
    6. Profiling of Parkin-binding partners using tandem affinity purification. (PubMed id 24244333)1 Zanon A....Pichler I. (PLoS ONE 2013)
    7. Interlaboratory reproducibility of large-scale human protein-complex analysis by standardized AP-MS. (PubMed id 23455922)1 Varjosalo M....Superti-Furga G. (Nat. Methods 2013)
    8. A regulatory circuit that involves HR23B and HDAC6 governs the biological response to HDAC inhibitors. (PubMed id 23703321)1 New M....La Thangue N.B. (Cell Death Differ. 2013)
    9. A census of human soluble protein complexes. (PubMed id 22939629)1 Havugimana P.C....Emili A. (Cell 2012)
    10. Protein interaction profiling of the p97 adaptor UBXD1 points to a role for the complex in modulating ERGIC-53 trafficking. (PubMed id 22337587)1 Haines D.S....Deshaies R.J. (amp 2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 84790 HGNC: 20768 AceView: TUBA6 Ensembl:ENSG00000167553 euGenes: HUgn84790
    ECgene: TUBA1C Kegg: 84790 H-InvDB: TUBA1C

    (According to HUGE)
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      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
    About This Section

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    NameDescription
    PharmGKB entry for TUBA1C Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section

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    Patent Information for TUBA1C gene:
    Search GeneIP for patents involving TUBA1C

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, eBioscience, and/or others, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Addgene, Cell lines from GenScript, and ESI BIO, Flow cytometery from eBioscience, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
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