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Aliases for TTTY9A Gene

Subcategory (RNA class) for TTTY9A Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTTY9A Gene

  • Testis-Specific Transcript, Y-Linked 9A (Non-Protein Coding) 2 3
  • Testis-Specific Transcript, Y-Linked 9 2
  • OFD1 Pseudogene 6, Y-Linked 5
  • Non-Protein Coding RNA 131 2
  • Testis Transcript Y 9 3
  • NCRNA00131 3
  • OFD1P6Y 5
  • TTTY9 3
  • TTY9 3

External Ids for TTTY9A Gene

Previous HGNC Symbols for TTTY9A Gene

  • TTTY9

Previous GeneCards Identifiers for TTTY9A Gene

  • GC0YP019280
  • GC0YP019351
  • GC0YP020892
  • GC0YP014603

Summaries for TTTY9A Gene

Entrez Gene Summary for TTTY9A Gene

  • This gene is transcribed but does not appear to encode a protein. Two identical copies of this gene are present in a palindromic region (P4) on chromosome Y. This record represents the more telomeric copy. [provided by RefSeq, Jul 2008]

GeneCards Summary for TTTY9A Gene

TTTY9A (Testis-Specific Transcript, Y-Linked 9A (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY9A Gene

Genomics for TTTY9A Gene

Regulatory Elements for TTTY9A Gene


Genomic Location for TTTY9A Gene

Chromosome:
Y
Start:
18,674,033 bp from pter
End:
18,739,197 bp from pter
Size:
65,165 bases
Orientation:
Plus strand

Genomic View for TTTY9A Gene

Genes around TTTY9A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTTY9A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTTY9A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY9A Gene

Proteins for TTTY9A Gene

Post-translational modifications for TTTY9A Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY9A Gene

Domains & Families for TTTY9A Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTTY9A Gene

Function for TTTY9A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTTY9A Gene

Localization for TTTY9A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTTY9A Gene

Pathways & Interactions for TTTY9A Gene

SuperPathways for TTTY9A Gene

No Data Available

Interacting Proteins for TTTY9A Gene

Gene Ontology (GO) - Biological Process for TTTY9A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTTY9A Gene

Drugs & Compounds for TTTY9A Gene

No Compound Related Data Available

Transcripts for TTTY9A Gene

mRNA/cDNA for TTTY9A Gene

(1) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TTTY9A Gene

Testis-specific transcript, Y-linked 9A (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY9A Gene

No ASD Table

Relevant External Links for TTTY9A Gene

GeneLoc Exon Structure for
TTTY9A
ECgene alternative splicing isoforms for
TTTY9A

Expression for TTTY9A Gene

mRNA expression in normal human tissues for TTTY9A Gene

SOURCE GeneReport for Unigene cluster for TTTY9A Gene Hs.536002

genes like me logo Genes that share expression patterns with TTTY9A: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TTTY9A Gene

Orthologs for TTTY9A Gene

Evolution for TTTY9A Gene

ENSEMBL:
Gene Tree for TTTY9A (if available)
TreeFam:
Gene Tree for TTTY9A (if available)

No data available for Orthologs for TTTY9A Gene

Paralogs for TTTY9A Gene

No data available for Paralogs for TTTY9A Gene

Variants for TTTY9A Gene

Sequence variations from dbSNP and Humsavar for TTTY9A Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type
rs233739 -- 18,730,120(+) ccctg(A/G)gtatg intron-variant
rs796467335 -- 18,728,341(+) ACTTA(C/T)TGTCT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for TTTY9A Gene

Variant ID Type Subtype PubMed ID
esv1670141 OTHER Inversion 17803354
dgv2500e1 CNV Complex 17122850

Relevant External Links for TTTY9A Gene

HapMap Linkage Disequilibrium report
TTTY9A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TTTY9A Gene

Disorders for TTTY9A Gene

Relevant External Links for TTTY9A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TTTY9A

No disorders were found for TTTY9A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTTY9A Gene

Publications for TTTY9A Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3 67

Products for TTTY9A Gene

Sources for TTTY9A Gene

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