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Aliases for TTTY8 Gene

Subcategory (RNA class) for TTTY8 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for TTTY8 Gene

  • Testis-Specific Transcript, Y-Linked 8 (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 130 2 3
  • Testis-Specific Transcript, Y-Linked 8 2
  • Non-Protein Coding RNA 130 2
  • Testis Transcript Y 8 3
  • Transcript Y 8 3
  • NCRNA00130 3
  • LINC00130 3
  • TTY8 3

External Ids for TTTY8 Gene

ORGUL Members for TTTY8 Gene

Previous GeneCards Identifiers for TTTY8 Gene

  • GC0YM006304
  • GC0YP009444
  • GC0YP009143
  • GC0YP009144
  • GC0YP010122
  • GC0YP009529
  • GC0YP006868

Summaries for TTTY8 Gene

GeneCards Summary for TTTY8 Gene

TTTY8 (Testis-Specific Transcript, Y-Linked 8 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY8 Gene

Genomics for TTTY8 Gene

Genomic Location for TTTY8 Gene

Start:
9,691,100 bp from pter
End:
9,693,957 bp from pter
Size:
2,858 bases
Orientation:
Plus strand

Genomic View for TTTY8 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TTTY8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY8 Gene

Proteins for TTTY8 Gene

Post-translational modifications for TTTY8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY8 Gene

Domains for TTTY8 Gene

Gene Families for TTTY8 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TTTY8: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTTY8 Gene

Function for TTTY8 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TTTY8 Gene

Localization for TTTY8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTTY8 Gene

Pathways for TTTY8 Gene

SuperPathways for TTTY8 Gene

No Data Available

Interacting Proteins for TTTY8 Gene

Gene Ontology (GO) - Biological Process for TTTY8 Gene

None

No data available for Pathways by source for TTTY8 Gene

Transcripts for TTTY8 Gene

mRNA/cDNA for TTTY8 Gene

(6) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TTTY8

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY8 Gene

No ASD Table

Relevant External Links for TTTY8 Gene

GeneLoc Exon Structure for
TTTY8
ECgene alternative splicing isoforms for
TTTY8

Expression for TTTY8 Gene

mRNA expression in normal human tissues for TTTY8 Gene

genes like me logo Genes that share expressions with TTTY8: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for TTTY8 Gene

Orthologs for TTTY8 Gene

Evolution for TTTY8 Gene

ENSEMBL:
Gene Tree for TTTY8 (if available)
TreeFam:
Gene Tree for TTTY8 (if available)

No data available for Orthologs for TTTY8 Gene

Paralogs for TTTY8 Gene

No data available for Paralogs for TTTY8 Gene

Variants for TTTY8 Gene

Sequence variations from dbSNP and Humsavar for TTTY8 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs712985 -- 9,690,984(-) CTCAG(A/G)CCTGG upstream-variant-2KB
rs3853011 -- 9,693,949(+) aatta(A/G)taaat downstream-variant-500B
rs113834080 -- 9,689,967(+) ACAGG(G/T)AAACT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for TTTY8 Gene

Variant ID Type Subtype PubMed ID
nsv7473 OTHER Inversion 18451855
nsv508820 CNV Insertion 20534489

Relevant External Links for TTTY8 Gene

HapMap Linkage Disequilibrium report
TTTY8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TTTY8 Gene

Disorders for TTTY8 Gene

No disorders were found for TTTY8 Gene.

No data available for UniProtKB/Swiss-Prot for TTTY8 Gene

Publications for TTTY8 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3

Products for TTTY8 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TTTY8
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for TTTY8
    • Block miRNA regulation of TTTY8 using miScript Target Protectors

    Sources for TTTY8 Gene

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