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Aliases for TTTY7B Gene

Subcategory (RNA class) for TTTY7B Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTTY7B Gene

  • Testis-Specific Transcript, Y-Linked 7B (Non-Protein Coding) 2 3
  • Non-Protein Coding RNA 215 2
  • NCRNA00215 3

External Ids for TTTY7B Gene

Previous GeneCards Identifiers for TTTY7B Gene

  • GC0YM010156
  • GC0YM009545
  • GC0YM006884

Summaries for TTTY7B Gene

GeneCards Summary for TTTY7B Gene

TTTY7B (Testis-Specific Transcript, Y-Linked 7B (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY7B Gene

Genomics for TTTY7B Gene

Genomic Location for TTTY7B Gene

Chromosome:
Y
Start:
9,706,824 bp from pter
End:
9,715,262 bp from pter
Size:
8,439 bases
Orientation:
Minus strand

Genomic View for TTTY7B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TTTY7B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY7B Gene

No data available for Regulatory Elements for TTTY7B Gene

Proteins for TTTY7B Gene

Post-translational modifications for TTTY7B Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY7B Gene

Domains & Families for TTTY7B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTTY7B Gene

Function for TTTY7B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTTY7B Gene

Localization for TTTY7B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTTY7B Gene

Pathways & Interactions for TTTY7B Gene

SuperPathways for TTTY7B Gene

No Data Available

Interacting Proteins for TTTY7B Gene

Gene Ontology (GO) - Biological Process for TTTY7B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTTY7B Gene

Drugs & Compounds for TTTY7B Gene

No Compound Related Data Available

Transcripts for TTTY7B Gene

mRNA/cDNA for TTTY7B Gene

(1) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TTTY7B Gene

Testis-specific transcript, Y-linked 7B (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY7B Gene

No ASD Table

Relevant External Links for TTTY7B Gene

GeneLoc Exon Structure for
TTTY7B
ECgene alternative splicing isoforms for
TTTY7B

Expression for TTTY7B Gene

mRNA expression in normal human tissues for TTTY7B Gene

SOURCE GeneReport for Unigene cluster for TTTY7B Gene Hs.711912

genes like me logo Genes that share expression patterns with TTTY7B: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TTTY7B Gene

Orthologs for TTTY7B Gene

Evolution for TTTY7B Gene

ENSEMBL:
Gene Tree for TTTY7B (if available)
TreeFam:
Gene Tree for TTTY7B (if available)

No data available for Orthologs for TTTY7B Gene

Paralogs for TTTY7B Gene

No data available for Paralogs for TTTY7B Gene

Variants for TTTY7B Gene

Sequence variations from dbSNP and Humsavar for TTTY7B Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs2535821 -- 9,706,897(-) CCCTG(C/T)GGACC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for TTTY7B Gene

Variant ID Type Subtype PubMed ID
dgv2496e1 CNV Complex 17122850
nsv7473 OTHER Inversion 18451855
nsv508820 CNV Insertion 20534489

Relevant External Links for TTTY7B Gene

HapMap Linkage Disequilibrium report
TTTY7B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TTTY7B Gene

Disorders for TTTY7B Gene

Relevant External Links for TTTY7B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TTTY7B
genes like me logo Genes that share disorders with TTTY7B: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTTY7B Gene

Publications for TTTY7B Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 67
  2. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 67

Products for TTTY7B Gene

Sources for TTTY7B Gene

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