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Aliases for TTTY6B Gene

Subcategory (RNA class) for TTTY6B Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTTY6B Gene

  • Testis-Specific Transcript, Y-Linked 6B (Non-Protein Coding) 2 3 5
  • Long Intergenic Non-Protein Coding RNA 128 2 3
  • Testis-Specific Transcript, Y-Linked 6B 2
  • Testis-Specific Y-Linked 6, Centromeric 3
  • NCRNA00128 3
  • LINC00128 3
  • TTTY6 3
  • TTY6 3

External Ids for TTTY6B Gene

Previous GeneCards Identifiers for TTTY6B Gene

  • GC0YP022630
  • GC0YP024291

Summaries for TTTY6B Gene

Entrez Gene Summary for TTTY6B Gene

  • There are two copies of this locus in the P3 palindrome on chromosome Y. This record represents the more centromeric copy. [provided by RefSeq, Jul 2008]

GeneCards Summary for TTTY6B Gene

TTTY6B (Testis-Specific Transcript, Y-Linked 6B (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY6B Gene

Genomics for TTTY6B Gene

Genomic Location for TTTY6B Gene

Chromosome:
Y
Start:
22,144,966 bp from pter
End:
22,146,834 bp from pter
Size:
1,869 bases
Orientation:
Plus strand

Genomic View for TTTY6B Gene

Genes around TTTY6B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTTY6B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTTY6B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY6B Gene

Proteins for TTTY6B Gene

Post-translational modifications for TTTY6B Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY6B Gene

Domains & Families for TTTY6B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTTY6B Gene

Function for TTTY6B Gene

Phenotypes for TTTY6B Gene

GenomeRNAi human phenotypes for TTTY6B:
genes like me logo Genes that share phenotypes with TTTY6B: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTTY6B Gene

Localization for TTTY6B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTTY6B Gene

Pathways & Interactions for TTTY6B Gene

SuperPathways for TTTY6B Gene

No Data Available

Interacting Proteins for TTTY6B Gene

Gene Ontology (GO) - Biological Process for TTTY6B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTTY6B Gene

Drugs & Compounds for TTTY6B Gene

No Compound Related Data Available

Transcripts for TTTY6B Gene

mRNA/cDNA for TTTY6B Gene

(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY6B Gene

No ASD Table

Relevant External Links for TTTY6B Gene

GeneLoc Exon Structure for
TTTY6B
ECgene alternative splicing isoforms for
TTTY6B

Expression for TTTY6B Gene

mRNA expression in normal human tissues for TTTY6B Gene

SOURCE GeneReport for Unigene cluster for TTTY6B Gene Hs.722660

genes like me logo Genes that share expression patterns with TTTY6B: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TTTY6B Gene

Orthologs for TTTY6B Gene

Evolution for TTTY6B Gene

ENSEMBL:
Gene Tree for TTTY6B (if available)
TreeFam:
Gene Tree for TTTY6B (if available)

No data available for Orthologs for TTTY6B Gene

Paralogs for TTTY6B Gene

No data available for Paralogs for TTTY6B Gene

Variants for TTTY6B Gene

Structural Variations from Database of Genomic Variants (DGV) for TTTY6B Gene

Variant ID Type Subtype PubMed ID
dgv2501e1 CNV Complex 17122850
essv11423 CNV CNV 17122850
essv15983 CNV CNV 17122850
nsv508822 CNV Insertion 20534489

Relevant External Links for TTTY6B Gene

HapMap Linkage Disequilibrium report
TTTY6B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for TTTY6B Gene

Disorders for TTTY6B Gene

Relevant External Links for TTTY6B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TTTY6B

No disorders were found for TTTY6B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTTY6B Gene

Publications for TTTY6B Gene

  1. Discrimination of non-protein-coding transcripts from protein-coding mRNA. (PMID: 17114936) Frith M.C. … Mattick J.S. (RNA Biol 2006) 3 67
  2. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3

Products for TTTY6B Gene

Sources for TTTY6B Gene

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