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Aliases for TTTY6 Gene

Subcategory (RNA class) for TTTY6 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TTTY6 Gene

  • Testis-Specific Transcript, Y-Linked 6 (Non-Protein Coding) 2 3 5
  • Long Intergenic Non-Protein Coding RNA 127 2 3
  • Testis-Specific Transcript, Y-Linked 6 2
  • Testis Transcript Y 6 3
  • NCRNA00127 3
  • LINC00127 3
  • TTTY6A 3
  • TTY6 3

External Ids for TTTY6 Gene

Previous GeneCards Identifiers for TTTY6 Gene

  • GC0YM023740
  • GC0YP023446
  • GC0YP023136
  • GC0YP023109
  • GC0YM022923
  • GC0YM022995
  • GC0YM024585
  • GC0YM017747

Summaries for TTTY6 Gene

Entrez Gene Summary for TTTY6 Gene

  • There are two copies of this locus in the P3 palindrome on chromosome Y. This record represents the more telomeric copy. [provided by RefSeq, Jul 2008]

GeneCards Summary for TTTY6 Gene

TTTY6 (Testis-Specific Transcript, Y-Linked 6 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TTTY6 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY6 Gene

Genomics for TTTY6 Gene

GeneHancer (GH) Regulatory Elements for TTTY6 Gene

Promoters and enhancers for TTTY6 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0YI022403 Promoter 0.5 EPDnew 0.3 +38.0 37983 0.1 RBMY1J TSPY21P TTTY6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TTTY6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TTTY6 Gene

Genomic Locations for TTTY6 Gene
1,867 bases
Minus strand

Genomic View for TTTY6 Gene

Genes around TTTY6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTTY6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTTY6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY6 Gene

Proteins for TTTY6 Gene

Post-translational modifications for TTTY6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY6 Gene

Domains & Families for TTTY6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTTY6 Gene

Function for TTTY6 Gene

Phenotypes for TTTY6 Gene

GenomeRNAi human phenotypes for TTTY6:
genes like me logo Genes that share phenotypes with TTTY6: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTTY6 Gene

Localization for TTTY6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TTTY6 Gene

Pathways & Interactions for TTTY6 Gene

SuperPathways for TTTY6 Gene

No Data Available

Interacting Proteins for TTTY6 Gene

Gene Ontology (GO) - Biological Process for TTTY6 Gene


No data available for Pathways by source and SIGNOR curated interactions for TTTY6 Gene

Drugs & Compounds for TTTY6 Gene

No Compound Related Data Available

Transcripts for TTTY6 Gene

mRNA/cDNA for TTTY6 Gene

(2) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TTTY6 Gene

Testis-specific transcript, Y-linked 6 (non-protein coding):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY6 Gene

No ASD Table

Relevant External Links for TTTY6 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TTTY6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TTTY6 Gene

NURSA nuclear receptor signaling pathways regulating expression of TTTY6 Gene:


SOURCE GeneReport for Unigene cluster for TTTY6 Gene:

genes like me logo Genes that share expression patterns with TTTY6: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TTTY6 Gene

Orthologs for TTTY6 Gene

Evolution for TTTY6 Gene

Gene Tree for TTTY6 (if available)
Gene Tree for TTTY6 (if available)

No data available for Orthologs for TTTY6 Gene

Paralogs for TTTY6 Gene

No data available for Paralogs for TTTY6 Gene

Variants for TTTY6 Gene

Sequence variations from dbSNP and Humsavar for TTTY6 Gene

SNP ID Clin Chr 0Y pos Variation AA Info Type
rs200766062 -- 22,441,818(-) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for TTTY6 Gene

Variant ID Type Subtype PubMed ID
esv2758908 CNV gain+loss 17122850
esv3575115 CNV loss 25503493
esv3575117 CNV loss 25503493
nsv508822 CNV insertion 20534489

Additional Variant Information for TTTY6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TTTY6 Gene

Disorders for TTTY6 Gene

Additional Disease Information for TTTY6

No disorders were found for TTTY6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTTY6 Gene

Publications for TTTY6 Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H … Page DC (Nature 2003) 3 58

Products for TTTY6 Gene

Sources for TTTY6 Gene

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