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Aliases for TTTY6 Gene

Subcategory (RNA class) for TTTY6 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTTY6 Gene

  • Testis-Specific Transcript, Y-Linked 6 (Non-Protein Coding) 2 3 5
  • Long Intergenic Non-Protein Coding RNA 127 2 3
  • Testis-Specific Transcript, Y-Linked 6 2
  • Testis Transcript Y 6 3
  • NCRNA00127 3
  • LINC00127 3
  • TTTY6A 3
  • TTY6 3

External Ids for TTTY6 Gene

Previous GeneCards Identifiers for TTTY6 Gene

  • GC0YM023740
  • GC0YP023446
  • GC0YP023136
  • GC0YP023109
  • GC0YM022923
  • GC0YM022995
  • GC0YM024585
  • GC0YM017747

Summaries for TTTY6 Gene

Entrez Gene Summary for TTTY6 Gene

  • There are two copies of this locus in the P3 palindrome on chromosome Y. This record represents the more telomeric copy. [provided by RefSeq, Jul 2008]

GeneCards Summary for TTTY6 Gene

TTTY6 (Testis-Specific Transcript, Y-Linked 6 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY6 Gene

Genomics for TTTY6 Gene

Genomic Location for TTTY6 Gene

Chromosome:
Y
Start:
22,439,593 bp from pter
End:
22,441,459 bp from pter
Size:
1,867 bases
Orientation:
Minus strand

Genomic View for TTTY6 Gene

Genes around TTTY6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTTY6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTTY6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY6 Gene

No data available for Regulatory Elements for TTTY6 Gene

Proteins for TTTY6 Gene

Post-translational modifications for TTTY6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY6 Gene

Domains & Families for TTTY6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTTY6 Gene

Function for TTTY6 Gene

Phenotypes for TTTY6 Gene

GenomeRNAi human phenotypes for TTTY6:
genes like me logo Genes that share phenotypes with TTTY6: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTTY6 Gene

Localization for TTTY6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTTY6 Gene

Pathways & Interactions for TTTY6 Gene

SuperPathways for TTTY6 Gene

No Data Available

Interacting Proteins for TTTY6 Gene

Gene Ontology (GO) - Biological Process for TTTY6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTTY6 Gene

Drugs & Compounds for TTTY6 Gene

No Compound Related Data Available

Transcripts for TTTY6 Gene

mRNA/cDNA for TTTY6 Gene

(2) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TTTY6 Gene

Testis-specific transcript, Y-linked 6 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY6 Gene

No ASD Table

Relevant External Links for TTTY6 Gene

GeneLoc Exon Structure for
TTTY6
ECgene alternative splicing isoforms for
TTTY6

Expression for TTTY6 Gene

mRNA expression in normal human tissues for TTTY6 Gene

SOURCE GeneReport for Unigene cluster for TTTY6 Gene Hs.535085

genes like me logo Genes that share expression patterns with TTTY6: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TTTY6 Gene

Orthologs for TTTY6 Gene

Evolution for TTTY6 Gene

ENSEMBL:
Gene Tree for TTTY6 (if available)
TreeFam:
Gene Tree for TTTY6 (if available)

No data available for Orthologs for TTTY6 Gene

Paralogs for TTTY6 Gene

No data available for Paralogs for TTTY6 Gene

Variants for TTTY6 Gene

Sequence variations from dbSNP and Humsavar for TTTY6 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type
rs200766062 -- 22,441,818(+) GTGTG(C/T)GCGCA upstream-variant-2KB
rs796767778 -- 22,439,864(+) CAGAA(A/T)GTGCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TTTY6 Gene

Variant ID Type Subtype PubMed ID
dgv2501e1 CNV Complex 17122850
essv11423 CNV CNV 17122850
essv15983 CNV CNV 17122850
nsv508822 CNV Insertion 20534489

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for TTTY6 Gene

Disorders for TTTY6 Gene

Relevant External Links for TTTY6

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TTTY6

No disorders were found for TTTY6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTTY6 Gene

Publications for TTTY6 Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3 67

Products for TTTY6 Gene

Sources for TTTY6 Gene

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