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Aliases for TTTY4 Gene

Subcategory (RNA class) for TTTY4 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TTTY4 Gene

  • Testis-Specific Transcript, Y-Linked 4 (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 123 2 3
  • Testis-Specific Transcript, Y-Linked 4 2
  • NCRNA00123 3
  • LINC00123 3
  • TTTY4A 3
  • TTY4 3

External Ids for TTTY4 Gene

Previous GeneCards Identifiers for TTTY4 Gene

  • GC0YU990042
  • GC0YP025561
  • GC0YP023420
  • GC0YP023491
  • GC0YP025082
  • GC0YP017892

Summaries for TTTY4 Gene

Entrez Gene Summary for TTTY4 Gene

  • There are three copies of this gene on chromosome Y. This record represents the most centromeric copy. [provided by RefSeq, Jul 2008]

GeneCards Summary for TTTY4 Gene

TTTY4 (Testis-Specific Transcript, Y-Linked 4 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY4 Gene

Genomics for TTTY4 Gene

Genomic Location for TTTY4 Gene

22,936,455 bp from pter
22,973,284 bp from pter
36,830 bases
Plus strand

Genomic View for TTTY4 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TTTY4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY4 Gene

No data available for Regulatory Elements for TTTY4 Gene

Proteins for TTTY4 Gene

Post-translational modifications for TTTY4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY4 Gene

Domains & Families for TTTY4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTTY4 Gene

Function for TTTY4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTTY4 Gene

Localization for TTTY4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTTY4 Gene

Pathways & Interactions for TTTY4 Gene

SuperPathways for TTTY4 Gene

No Data Available

Interacting Proteins for TTTY4 Gene

Gene Ontology (GO) - Biological Process for TTTY4 Gene


No data available for Pathways by source and SIGNOR curated interactions for TTTY4 Gene

Drugs & Compounds for TTTY4 Gene

No Compound Related Data Available

Transcripts for TTTY4 Gene

mRNA/cDNA for TTTY4 Gene

(3) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TTTY4 Gene

Testis-specific transcript, Y-linked 4 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY4 Gene

No ASD Table

Relevant External Links for TTTY4 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TTTY4 Gene

mRNA expression in normal human tissues for TTTY4 Gene

SOURCE GeneReport for Unigene cluster for TTTY4 Gene Hs.679521

genes like me logo Genes that share expression patterns with TTTY4: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TTTY4 Gene

Orthologs for TTTY4 Gene

Evolution for TTTY4 Gene

Gene Tree for TTTY4 (if available)
Gene Tree for TTTY4 (if available)

No data available for Orthologs for TTTY4 Gene

Paralogs for TTTY4 Gene

No data available for Paralogs for TTTY4 Gene

Variants for TTTY4 Gene

Sequence variations from dbSNP and Humsavar for TTTY4 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs158457 -- 22,950,708(+) caatt(A/T)cccag intron-variant
rs158462 -- 22,968,661(+) actgt(C/G)tcgta intron-variant
rs159647 -- 22,942,293(+) atgcc(A/G)cacaa intron-variant
rs159651 -- 22,944,010(+) cttgg(C/T)gaact intron-variant
rs159653 -- 22,953,795(+) taact(A/G)tttgt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TTTY4 Gene

Variant ID Type Subtype PubMed ID
dgv2504e1 CNV Complex 17122850
dgv2505e1 CNV Complex 17122850
dgv2506e1 CNV Complex 17122850
nsv10034 CNV Loss 18304495
essv10843 CNV CNV 17122850
nsv508824 CNV Insertion 20534489
dgv2507e1 CNV Complex 17122850
nsv442825 CNV CNV 18776908
dgv2508e1 CNV Complex 17122850
dgv2509e1 CNV Complex 17122850
dgv2510e1 CNV Complex 17122850
nsv515230 CNV Complex 21397061
nsv469740 CNV Complex 16826518
nsv442826 CNV CNV 18776908
nsv515231 CNV Complex 21397061
dgv2513e1 CNV Complex 17122850

Relevant External Links for TTTY4 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TTTY4 Gene

Disorders for TTTY4 Gene

Relevant External Links for TTTY4

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with TTTY4: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTTY4 Gene

Publications for TTTY4 Gene

  1. Single-nucleotide polymorphisms in the TSPYL-4 and NT5DC1 genes are associated with susceptibility to chronic obstructive pulmonary disease. (PMID: 22736055) Guo Y. … Wan H. (Mol Med Rep 2012) 67
  2. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 67

Products for TTTY4 Gene

Sources for TTTY4 Gene

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