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Aliases for TTTY2B Gene

Subcategory (RNA class) for TTTY2B Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for TTTY2B Gene

  • Testis-Specific Transcript, Y-Linked 2B (Non-Protein Coding) 2 3

External Ids for TTTY2B Gene

ORGUL Members for TTTY2B Gene

Summaries for TTTY2B Gene

GeneCards Summary for TTTY2B Gene

TTTY2B (Testis-Specific Transcript, Y-Linked 2B (Non-Protein Coding)) is an RNA Gene, and belongs to the lncRNA class.

fRNAdb sequence ontologies for TTTY2B Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TTTY2B Gene

Genomics for TTTY2B Gene

Genomic Location for TTTY2B Gene

Start:
6,406,244 bp from pter
End:
6,428,444 bp from pter
Size:
22,201 bases
Orientation:
Minus strand

Genomic View for TTTY2B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TTTY2B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY2B Gene

No data available for Regulatory Elements for TTTY2B Gene

Proteins for TTTY2B Gene

Post-translational modifications for TTTY2B Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY2B Gene

Domains for TTTY2B Gene

Gene Families for TTTY2B Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TTTY2B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTTY2B Gene

Function for TTTY2B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TTTY2B Gene

Localization for TTTY2B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTTY2B Gene

Pathways for TTTY2B Gene

SuperPathways for TTTY2B Gene

No Data Available

Interacting Proteins for TTTY2B Gene

Gene Ontology (GO) - Biological Process for TTTY2B Gene

None

No data available for Pathways by source for TTTY2B Gene

Transcripts for TTTY2B Gene

mRNA/cDNA for TTTY2B Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TTTY2B Gene

Testis-specific transcript, Y-linked 2B (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY2B Gene

No ASD Table

Relevant External Links for TTTY2B Gene

GeneLoc Exon Structure for
TTTY2B
ECgene alternative splicing isoforms for
TTTY2B

Expression for TTTY2B Gene

mRNA expression in normal human tissues for TTTY2B Gene

SOURCE GeneReport for Unigene cluster for TTTY2B Gene Hs.723046

genes like me logo Genes that share expressions with TTTY2B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for TTTY2B Gene

Orthologs for TTTY2B Gene

Evolution for TTTY2B Gene

ENSEMBL:
Gene Tree for TTTY2B (if available)
TreeFam:
Gene Tree for TTTY2B (if available)

No data available for Orthologs for TTTY2B Gene

Paralogs for TTTY2B Gene

No data available for Paralogs for TTTY2B Gene

Variants for TTTY2B Gene

Sequence variations from dbSNP and Humsavar for TTTY2B Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs2535817 -- 6,427,787(+) TTTTT(G/T)TGTGT intron-variant
rs111277518 -- 6,420,067(+) AAAGA(A/G)TGAGC intron-variant
rs369730104 -- 6,412,378(+) AAAAA(-/GA)AAAAA intron-variant
rs377097870 -- 6,425,606(+) ACACA(A/C)AAAAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TTTY2B Gene

Variant ID Type Subtype PubMed ID
dgv2496e1 CNV Complex 17122850
nsv7473 OTHER Inversion 18451855
nsv508820 CNV Insertion 20534489

Relevant External Links for TTTY2B Gene

HapMap Linkage Disequilibrium report
TTTY2B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TTTY2B Gene

Disorders for TTTY2B Gene

No disorders were found for TTTY2B Gene.

No data available for UniProtKB/Swiss-Prot for TTTY2B Gene

Publications for TTTY2B Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3
  2. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3

Products for TTTY2B Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TTTY2B
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for TTTY2B
    • Block miRNA regulation of TTTY2B using miScript Target Protectors

    Sources for TTTY2B Gene

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