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Aliases for TTTY21B Gene

Subcategory (RNA class) for TTTY21B Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for TTTY21B Gene

  • Testis-Specific Transcript, Y-Linked 21B (Non-Protein Coding) 2 3

External Ids for TTTY21B Gene

Summaries for TTTY21B Gene

GeneCards Summary for TTTY21B Gene

TTTY21B (Testis-Specific Transcript, Y-Linked 21B (Non-Protein Coding)) is a RNA Gene, and belongs to lncRNA RNA class.

fRNAdb sequence ontologies for TTTY21B Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TTTY21B Gene

Genomics for TTTY21B Gene

Genomic Location for TTTY21B Gene

Start:
6,443,434 bp from pter
End:
6,447,077 bp from pter
Size:
3,644 bases
Orientation:
Plus strand

Genomic View for TTTY21B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TTTY21B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY21B Gene

No data available for Regulatory Elements for TTTY21B Gene

Proteins for TTTY21B Gene

Post-translational modifications for TTTY21B Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY21B Gene

Domains for TTTY21B Gene

Gene Families for TTTY21B Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with TTTY21B: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for TTTY21B Gene

Function for TTTY21B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TTTY21B Gene

Localization for TTTY21B Gene

No data available for Gene Ontology (GO) - Cellular Components for TTTY21B Gene

Pathways for TTTY21B Gene

SuperPathways for TTTY21B Gene

No Data Available

Interacting Proteins for TTTY21B Gene

Gene Ontology (GO) - Biological Process for TTTY21B Gene

None

No data available for Pathways by source for TTTY21B Gene

Transcripts for TTTY21B Gene

mRNA/cDNA for TTTY21B Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY21B Gene

No ASD Table

Relevant External Links for TTTY21B Gene

GeneLoc Exon Structure for
TTTY21B
ECgene alternative splicing isoforms for
TTTY21B

Expression for TTTY21B Gene

mRNA expression in normal human tissues for TTTY21B Gene

mRNA expression in normal human tissues for TTTY21B Gene

SOURCE GeneReport for Unigene cluster for TTTY21B Gene Hs.522847

genes like me logo Genes that share expressions with TTTY21B: view

Orthologs for TTTY21B Gene

Evolution for TTTY21B Gene

ENSEMBL:
Gene Tree for TTTY21B (if available)
TreeFam:
Gene Tree for TTTY21B (if available)

No data available for Orthologs for TTTY21B Gene

Paralogs for TTTY21B Gene

No data available for Paralogs for TTTY21B Gene

Variants for TTTY21B Gene

Sequence variations from dbSNP and Humsavar for TTTY21B Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs4460580 -- 6,442,025(+) CCCTA(G/T)GCCAA upstream-variant-2KB
rs113180319 -- 6,441,925(+) TGTTT(A/T)GAAGG upstream-variant-2KB
rs113868215 -- 6,444,125(+) GTTCT(G/T)TTTGC intron-variant
rs374549923 -- 6,442,060(+) GAAGA(A/G)GCAAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for TTTY21B Gene

Variant ID Type Subtype PubMed ID
dgv2496e1 CNV Complex 17122850
nsv7473 OTHER Inversion 18451855
nsv508820 CNV Insertion 20534489

Relevant External Links for TTTY21B Gene

HapMap Linkage Disequilibrium report
TTTY21B

Disorders for TTTY21B Gene

No disorders were found for TTTY21B Gene.

No data available for UniProtKB/Swiss-Prot for TTTY21B Gene

Publications for TTTY21B Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3
  2. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3

Products for TTTY21B Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TTTY21B
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for TTTY21B
    • Block miRNA regulation of TTTY21B using miScript Target Protectors

    Sources for TTTY21B Gene

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