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Aliases for TTTY21 Gene

Subcategory (RNA class) for TTTY21 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for TTTY21 Gene

  • Testis-Specific Transcript, Y-Linked 21 (Non-Protein Coding) 2 3
  • Testis-Specific Transcript, Y-Linked 21 2
  • Non-Protein Coding RNA 146 2
  • NCRNA00146 3

External Ids for TTTY21 Gene

Previous GeneCards Identifiers for TTTY21 Gene

  • GC0YU990061
  • GC0YM009169
  • GC0YM010148
  • GC0YM010165
  • GC0YM009556
  • GC0YM006895

Summaries for TTTY21 Gene

GeneCards Summary for TTTY21 Gene

TTTY21 (Testis-Specific Transcript, Y-Linked 21 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for TTTY21 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TTTY21 Gene

Genomics for TTTY21 Gene

Genomic Location for TTTY21 Gene

Start:
9,717,653 bp from pter
End:
9,721,296 bp from pter
Size:
3,644 bases
Orientation:
Minus strand

Genomic View for TTTY21 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TTTY21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY21 Gene

No data available for Regulatory Elements for TTTY21 Gene

Proteins for TTTY21 Gene

Post-translational modifications for TTTY21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY21 Gene

Domains for TTTY21 Gene

Gene Families for TTTY21 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TTTY21: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTTY21 Gene

Function for TTTY21 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TTTY21 Gene

Localization for TTTY21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTTY21 Gene

Pathways for TTTY21 Gene

SuperPathways for TTTY21 Gene

No Data Available

Interacting Proteins for TTTY21 Gene

Gene Ontology (GO) - Biological Process for TTTY21 Gene

None

No data available for Pathways by source for TTTY21 Gene

Transcripts for TTTY21 Gene

mRNA/cDNA for TTTY21 Gene

(2) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TTTY21

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY21 Gene

No ASD Table

Relevant External Links for TTTY21 Gene

GeneLoc Exon Structure for
TTTY21
ECgene alternative splicing isoforms for
TTTY21

Expression for TTTY21 Gene

mRNA expression in normal human tissues for TTTY21 Gene

mRNA expression in normal human tissues for TTTY21 Gene
genes like me logo Genes that share expressions with TTTY21: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for TTTY21 Gene

Orthologs for TTTY21 Gene

Evolution for TTTY21 Gene

ENSEMBL:
Gene Tree for TTTY21 (if available)
TreeFam:
Gene Tree for TTTY21 (if available)

No data available for Orthologs for TTTY21 Gene

Paralogs for TTTY21 Gene

No data available for Paralogs for TTTY21 Gene

Variants for TTTY21 Gene

Sequence variations from dbSNP and Humsavar for TTTY21 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs2535819 -- 9,720,586(-) atttc(C/T)ggcag intron-variant
rs2535820 -- 9,718,623(-) GAGTT(G/T)GGTGT intron-variant
rs3898678 -- 9,719,053(+) GCCTA(G/T)CAACA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TTTY21 Gene

Variant ID Type Subtype PubMed ID
dgv2496e1 CNV Complex 17122850
nsv7473 OTHER Inversion 18451855
nsv508820 CNV Insertion 20534489

Relevant External Links for TTTY21 Gene

HapMap Linkage Disequilibrium report
TTTY21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TTTY21 Gene

Disorders for TTTY21 Gene

No disorders were found for TTTY21 Gene.

No data available for UniProtKB/Swiss-Prot for TTTY21 Gene

Publications for TTTY21 Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3

Products for TTTY21 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TTTY21
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for TTTY21
    • Block miRNA regulation of TTTY21 using miScript Target Protectors

    Sources for TTTY21 Gene

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