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Aliases for TTTY20 Gene

Subcategory (RNA class) for TTTY20 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTTY20 Gene

  • Testis-Specific Transcript, Y-Linked 20 (Non-Protein Coding) 2 3 5
  • Testis-Specific Transcript, Y-Linked 20 2
  • Non-Protein Coding RNA 145 2
  • NCRNA00145 3

External Ids for TTTY20 Gene

Previous GeneCards Identifiers for TTTY20 Gene

  • GC0YU990059
  • GC0YM009210
  • GC0YM009227
  • GC0YM009167

Summaries for TTTY20 Gene

GeneCards Summary for TTTY20 Gene

TTTY20 (Testis-Specific Transcript, Y-Linked 20 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY20 Gene

Genomics for TTTY20 Gene

Regulatory Elements for TTTY20 Gene


Genomic Location for TTTY20 Gene

Chromosome:
Y
Start:
9,329,880 bp from pter
End:
9,334,832 bp from pter
Size:
4,953 bases
Orientation:
Minus strand

Genomic View for TTTY20 Gene

Genes around TTTY20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTTY20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTTY20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY20 Gene

Proteins for TTTY20 Gene

Post-translational modifications for TTTY20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY20 Gene

Domains & Families for TTTY20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTTY20 Gene

Function for TTTY20 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTTY20 Gene

Localization for TTTY20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTTY20 Gene

Pathways & Interactions for TTTY20 Gene

SuperPathways for TTTY20 Gene

No Data Available

Interacting Proteins for TTTY20 Gene

Gene Ontology (GO) - Biological Process for TTTY20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTTY20 Gene

Drugs & Compounds for TTTY20 Gene

No Compound Related Data Available

Transcripts for TTTY20 Gene

mRNA/cDNA for TTTY20 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY20 Gene

No ASD Table

Relevant External Links for TTTY20 Gene

GeneLoc Exon Structure for
TTTY20
ECgene alternative splicing isoforms for
TTTY20

Expression for TTTY20 Gene

mRNA expression in normal human tissues for TTTY20 Gene

SOURCE GeneReport for Unigene cluster for TTTY20 Gene Hs.632292

genes like me logo Genes that share expression patterns with TTTY20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TTTY20 Gene

Orthologs for TTTY20 Gene

Evolution for TTTY20 Gene

ENSEMBL:
Gene Tree for TTTY20 (if available)
TreeFam:
Gene Tree for TTTY20 (if available)

No data available for Orthologs for TTTY20 Gene

Paralogs for TTTY20 Gene

No data available for Paralogs for TTTY20 Gene

Variants for TTTY20 Gene

Sequence variations from dbSNP and Humsavar for TTTY20 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type
rs698425 -- 9,335,283(-) TCCTC(C/G)CCAGA upstream-variant-2KB
rs2336951 -- 9,334,957(+) TTCCC(C/T)TTCCC upstream-variant-2KB
rs2336952 -- 9,334,969(+) GCTCT(C/G)CCACT upstream-variant-2KB
rs3876222 -- 9,334,700(+) CCAGT(C/T)CCACC intron-variant
rs3876223 -- 9,334,723(+) AGCTC(C/T)CCTAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TTTY20 Gene

Variant ID Type Subtype PubMed ID
nsv7473 OTHER Inversion 18451855
essv6780 CNV CNV 17122850

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for TTTY20 Gene

Disorders for TTTY20 Gene

Relevant External Links for TTTY20

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TTTY20

No disorders were found for TTTY20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTTY20 Gene

Publications for TTTY20 Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3 67

Products for TTTY20 Gene

Sources for TTTY20 Gene

Content