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Aliases for TTTY1B Gene

Subcategory (RNA class) for TTTY1B Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for TTTY1B Gene

  • Testis-Specific Transcript, Y-Linked 1B (Non-Protein Coding) 2 3
  • TTTY1 3

External Ids for TTTY1B Gene

ORGUL Members for TTTY1B Gene

Summaries for TTTY1B Gene

GeneCards Summary for TTTY1B Gene

TTTY1B (Testis-Specific Transcript, Y-Linked 1B (Non-Protein Coding)) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY1B Gene

Genomics for TTTY1B Gene

Genomic Location for TTTY1B Gene

Start:
6,390,401 bp from pter
End:
6,411,564 bp from pter
Size:
21,164 bases
Orientation:
Plus strand

Genomic View for TTTY1B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TTTY1B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY1B Gene

No data available for Regulatory Elements for TTTY1B Gene

Proteins for TTTY1B Gene

Post-translational modifications for TTTY1B Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY1B Gene

Domains for TTTY1B Gene

Gene Families for TTTY1B Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with TTTY1B: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for TTTY1B Gene

Function for TTTY1B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TTTY1B Gene

Localization for TTTY1B Gene

No data available for Gene Ontology (GO) - Cellular Components for TTTY1B Gene

Pathways for TTTY1B Gene

SuperPathways for TTTY1B Gene

No Data Available

Interacting Proteins for TTTY1B Gene

Gene Ontology (GO) - Biological Process for TTTY1B Gene

None

No data available for Pathways by source for TTTY1B Gene

Transcripts for TTTY1B Gene

mRNA/cDNA for TTTY1B Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TTTY1B Gene

Testis-specific transcript, Y-linked 1B (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY1B Gene

No ASD Table

Relevant External Links for TTTY1B Gene

GeneLoc Exon Structure for
TTTY1B
ECgene alternative splicing isoforms for
TTTY1B

Expression for TTTY1B Gene

mRNA expression in normal human tissues for TTTY1B Gene

SOURCE GeneReport for Unigene cluster for TTTY1B Gene Hs.722842

genes like me logo Genes that share expressions with TTTY1B: view

Orthologs for TTTY1B Gene

Evolution for TTTY1B Gene

ENSEMBL:
Gene Tree for TTTY1B (if available)
TreeFam:
Gene Tree for TTTY1B (if available)

No data available for Orthologs for TTTY1B Gene

Paralogs for TTTY1B Gene

No data available for Paralogs for TTTY1B Gene

Variants for TTTY1B Gene

Sequence variations from dbSNP and Humsavar for TTTY1B Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs369610977 -- 6,404,785(+) GAATG(C/T)CAGCC intron-variant
rs374917372 -- 6,395,801(+) CATAC(A/G)CAAAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TTTY1B Gene

Variant ID Type Subtype PubMed ID
dgv2496e1 CNV Complex 17122850
nsv7473 OTHER Inversion 18451855
nsv508820 CNV Insertion 20534489

Relevant External Links for TTTY1B Gene

HapMap Linkage Disequilibrium report
TTTY1B

Disorders for TTTY1B Gene

No disorders were found for TTTY1B Gene.

No data available for UniProtKB/Swiss-Prot for TTTY1B Gene

Publications for TTTY1B Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3
  2. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3

Products for TTTY1B Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TTTY1B
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for TTTY1B
    • Block miRNA regulation of TTTY1B using miScript Target Protectors

    Sources for TTTY1B Gene

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