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TTTY19 Gene(RNA Gene)

Testis-Specific Transcript, Y-Linked 19 (Non-Protein Coding)

GCID:
GC0YP008704
GIFtS:
13
Genes Participants
UDN Logo

Aliases for TTTY19 Gene

Subcategory (RNA class) for TTTY19 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTTY19 Gene

  • Testis-Specific Transcript, Y-Linked 19 (Non-Protein Coding) 2 3 5
  • Testis-Specific Transcript, Y-Linked 19 2
  • Non-Protein Coding RNA 144 2
  • NCRNA00144 3

External Ids for TTTY19 Gene

Previous GeneCards Identifiers for TTTY19 Gene

  • GC0YU990060
  • GC0YP008615
  • GC0YP006138

Summaries for TTTY19 Gene

GeneCards Summary for TTTY19 Gene

TTTY19 (Testis-Specific Transcript, Y-Linked 19 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TTTY19 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY19 Gene

Genomics for TTTY19 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for TTTY19 Gene

Promoters and enhancers for TTTY19 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH0YI008712 Enhancer 0.2 ENCODE 0.4 +8.1 8050 0.9 TTTY19 LOC105377235
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TTTY19 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TTTY19 Gene

Genomic Locations for TTTY19 Gene
chrY:8,704,472-8,705,283
(GRCh38/hg38)
Size:
812 bases
Orientation:
Plus strand
chrY:8,572,513-8,573,324
(GRCh37/hg19)

Genomic View for TTTY19 Gene

Genes around TTTY19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTTY19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTTY19 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TTTY19 Gene

Proteins for TTTY19 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TTTY19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY19 Gene

Domains & Families for TTTY19 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTTY19 Gene

Function for TTTY19 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTTY19 Gene

Localization for TTTY19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TTTY19 Gene

Pathways & Interactions for TTTY19 Gene

SuperPathways for TTTY19 Gene

PathCards logo More details on SuperPathways for TTTY19
No Data Available

Interacting Proteins for TTTY19 Gene

Gene Ontology (GO) - Biological Process for TTTY19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTTY19 Gene

Drugs & Compounds for TTTY19 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TTTY19 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for TTTY19 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY19 Gene

No ASD Table

Relevant External Links for TTTY19 Gene

GeneLoc Exon Structure for
TTTY19
ECgene alternative splicing isoforms for
TTTY19

Expression for TTTY19 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TTTY19 Gene

mRNA expression in normal human tissues for TTTY19 Gene
mRNA expression by GTEx for TTTY19 Gene

NURSA nuclear receptor signaling pathways regulating expression of TTTY19 Gene:

TTTY19

SOURCE GeneReport for Unigene cluster for TTTY19 Gene:

Hs.522853
genes like me logo Genes that share expression patterns with TTTY19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TTTY19 Gene

Orthologs for TTTY19 Gene

Evolution for TTTY19 Gene

ENSEMBL:
Gene Tree for TTTY19 (if available)
TreeFam:
Gene Tree for TTTY19 (if available)

No data available for Orthologs for TTTY19 Gene

Paralogs for TTTY19 Gene

No data available for Paralogs for TTTY19 Gene

Variants for TTTY19 Gene

Sequence variations from dbSNP and Humsavar for TTTY19 Gene

SNP ID Clin Chr 0Y pos Variation AA Info Type
rs1003571432 -- 8,705,606(+) C/T downstream_transcript_variant
rs1011322923 -- 8,704,100(+) G/T upstream_transcript_variant
rs1012845490 -- 8,705,410(+) G/T downstream_transcript_variant
rs1023612521 -- 8,705,463(+) C/T downstream_transcript_variant
rs1033322726 -- 8,703,886(+) G/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for TTTY19 Gene

Variant ID Type Subtype PubMed ID
nsv7473 OTHER inversion 18451855

Additional Variant Information for TTTY19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TTTY19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TTTY19 Gene

Disorders for TTTY19 Gene

Additional Disease Information for TTTY19

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for TTTY19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTTY19 Gene

Publications for TTTY19 Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H … Page DC (Nature 2003) 3 58

Products for TTTY19 Gene

Sources for TTTY19 Gene

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