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Aliases for TTTY15 Gene

Subcategory (RNA class) for TTTY15 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTTY15 Gene

  • Testis-Specific Transcript, Y-Linked 15 (Non-Protein Coding) 2 3 5
  • Testis-Specific Transcript, Y-Linked 15 2
  • Non-Protein Coding RNA 138 2
  • NCRNA00138 3

External Ids for TTTY15 Gene

Previous GeneCards Identifiers for TTTY15 Gene

  • GC0YU990036
  • GC0YP013782
  • GC0YP013212
  • GC0YP014774
  • GC0YP009427

Summaries for TTTY15 Gene

GeneCards Summary for TTTY15 Gene

TTTY15 (Testis-Specific Transcript, Y-Linked 15 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY15 Gene

Genomics for TTTY15 Gene

Regulatory Elements for TTTY15 Gene

Enhancers for TTTY15 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0YF012661 0.4 ENCODE 0.8 +0.4 425 3.1 POLR2A ZNF384 TTTY15 PIR35490
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TTTY15 on UCSC Golden Path with GeneCards custom track

Genomic Location for TTTY15 Gene

Chromosome:
Y
Start:
12,662,334 bp from pter
End:
12,692,233 bp from pter
Size:
29,900 bases
Orientation:
Plus strand

Genomic View for TTTY15 Gene

Genes around TTTY15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTTY15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTTY15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY15 Gene

Proteins for TTTY15 Gene

Post-translational modifications for TTTY15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY15 Gene

Domains & Families for TTTY15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTTY15 Gene

Function for TTTY15 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTTY15 Gene

Localization for TTTY15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTTY15 Gene

Pathways & Interactions for TTTY15 Gene

SuperPathways for TTTY15 Gene

No Data Available

Interacting Proteins for TTTY15 Gene

Gene Ontology (GO) - Biological Process for TTTY15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTTY15 Gene

Transcripts for TTTY15 Gene

mRNA/cDNA for TTTY15 Gene

Unigene Clusters for TTTY15 Gene

Testis-specific transcript, Y-linked 15 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY15 Gene

No ASD Table

Relevant External Links for TTTY15 Gene

GeneLoc Exon Structure for
TTTY15
ECgene alternative splicing isoforms for
TTTY15

Expression for TTTY15 Gene

mRNA expression in normal human tissues for TTTY15 Gene

NURSA nuclear receptor signaling pathways regulating expression of TTTY15 Gene:

TTTY15

SOURCE GeneReport for Unigene cluster for TTTY15 Gene:

Hs.433656
genes like me logo Genes that share expression patterns with TTTY15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TTTY15 Gene

Orthologs for TTTY15 Gene

Evolution for TTTY15 Gene

ENSEMBL:
Gene Tree for TTTY15 (if available)
TreeFam:
Gene Tree for TTTY15 (if available)

No data available for Orthologs for TTTY15 Gene

Paralogs for TTTY15 Gene

No data available for Paralogs for TTTY15 Gene

Variants for TTTY15 Gene

Sequence variations from dbSNP and Humsavar for TTTY15 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type
rs111257918 -- 12,671,554(+) TAGCC(A/G)GGATG intron-variant
rs111405757 -- 12,662,490(+) GCCCT(C/G)ATGTA nc-transcript-variant
rs111724761 -- 12,670,198(+) TTGCA(A/T)AATGT intron-variant
rs112022091 -- 12,675,862(+) TATAT(A/G)TGTGT intron-variant
rs112872806 -- 12,683,002(+) TTTTT(G/T)TTTTG intron-variant

Relevant External Links for TTTY15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TTTY15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TTTY15 Gene

Disorders for TTTY15 Gene

Relevant External Links for TTTY15

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TTTY15

No disorders were found for TTTY15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTTY15 Gene

Publications for TTTY15 Gene

  1. Clinical utility of a novel urine-based gene fusion TTTY15-USP9Y in predicting prostate biopsy outcome. (PMID: 26008593) Zhu Y. … Sun Y. (Urol. Oncol. 2015) 3 64
  2. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3 64

Products for TTTY15 Gene

Sources for TTTY15 Gene

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