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Aliases for TTTY13 Gene

Subcategory (RNA class) for TTTY13 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTTY13 Gene

  • Testis-Specific Transcript, Y-Linked 13 (Non-Protein Coding) 2 3 5
  • TTY13 3 4
  • Testis-Specific Transcript, Y-Linked 13 2
  • Non-Protein Coding RNA 136 2
  • Testis Transcript Y 13 3
  • Transcript Y 13 3
  • NCRNA00136 3

External Ids for TTTY13 Gene

Previous GeneCards Identifiers for TTTY13 Gene

  • GC0YM022900
  • GC0YM022590
  • GC0YP009146
  • GC0YM022154
  • GC0YM023745
  • GC0YM017288

Summaries for TTTY13 Gene

GeneCards Summary for TTTY13 Gene

TTTY13 (Testis-Specific Transcript, Y-Linked 13 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY13 Gene

Genomics for TTTY13 Gene

Regulatory Elements for TTTY13 Gene


Genomic Location for TTTY13 Gene

Chromosome:
Y
Start:
21,583,600 bp from pter
End:
21,594,666 bp from pter
Size:
11,067 bases
Orientation:
Minus strand

Genomic View for TTTY13 Gene

Genes around TTTY13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTTY13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTTY13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY13 Gene

Proteins for TTTY13 Gene

  • Protein details for TTTY13 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BZ97-TTY13_HUMAN
    Recommended name:
    Putative transcript Y 13 protein
    Protein Accession:
    Q9BZ97

    Protein attributes for TTTY13 Gene

    Size:
    58 amino acids
    Molecular mass:
    6256 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TTTY13 Gene

Post-translational modifications for TTTY13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY13 Gene

Domains & Families for TTTY13 Gene

Protein Domains for TTTY13 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for TTTY13 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TTTY13: view

No data available for Gene Families and UniProtKB/Swiss-Prot for TTTY13 Gene

Function for TTTY13 Gene

Phenotypes for TTTY13 Gene

GenomeRNAi human phenotypes for TTTY13:
genes like me logo Genes that share phenotypes with TTTY13: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTTY13 Gene

Localization for TTTY13 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TTTY13 Gene

Membrane; Single-pass membrane protein.

No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTTY13 Gene

Pathways & Interactions for TTTY13 Gene

SuperPathways for TTTY13 Gene

No Data Available

Interacting Proteins for TTTY13 Gene

Gene Ontology (GO) - Biological Process for TTTY13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTTY13 Gene

Transcripts for TTTY13 Gene

mRNA/cDNA for TTTY13 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY13 Gene

No ASD Table

Relevant External Links for TTTY13 Gene

GeneLoc Exon Structure for
TTTY13
ECgene alternative splicing isoforms for
TTTY13

Expression for TTTY13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TTTY13 Gene

mRNA differential expression in normal tissues according to GTEx for TTTY13 Gene

This gene is overexpressed in Testis (x42.7) and Brain - Caudate (basal ganglia) (x10.3).

NURSA nuclear receptor signaling pathways regulating expression of TTTY13 Gene:

TTTY13

SOURCE GeneReport for Unigene cluster for TTTY13 Gene:

Hs.615432
genes like me logo Genes that share expression patterns with TTTY13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TTTY13 Gene

Orthologs for TTTY13 Gene

Evolution for TTTY13 Gene

ENSEMBL:
Gene Tree for TTTY13 (if available)
TreeFam:
Gene Tree for TTTY13 (if available)

No data available for Orthologs for TTTY13 Gene

Paralogs for TTTY13 Gene

(1) SIMAP similar genes for TTTY13 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with TTTY13: view

No data available for Paralogs for TTTY13 Gene

Variants for TTTY13 Gene

Sequence variations from dbSNP and Humsavar for TTTY13 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type
rs112515204 -- 21,592,563(+) TGAGG(A/G)TATAA intron-variant
rs112785194 -- 21,595,100(+) CCTGG(C/T)GTTCA upstream-variant-2KB
rs113647300 -- 21,592,191(+) GCCTG(C/T)CTCTG intron-variant
rs200084847 -- 21,587,119(+) TGTTG(C/T)GAGTG intron-variant
rs200660447 -- 21,585,318(+) TTTCT(G/T)CTTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TTTY13 Gene

Variant ID Type Subtype PubMed ID
dgv2555e212 CNV gain 25503493
esv2758908 CNV gain+loss 17122850
nsv10026 CNV gain 18304495
nsv469635 CNV loss 16826518
nsv471611 CNV gain+loss 15918152

Relevant External Links for TTTY13 Gene

Human Gene Mutation Database (HGMD)
TTTY13
SNPedia medical, phenotypic, and genealogical associations of SNPs for
TTTY13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TTTY13 Gene

Disorders for TTTY13 Gene

Relevant External Links for TTTY13

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TTTY13

No disorders were found for TTTY13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTTY13 Gene

Publications for TTTY13 Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3 4 64

Products for TTTY13 Gene

Sources for TTTY13 Gene

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