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Aliases for TTTY10 Gene

Subcategory (RNA class) for TTTY10 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for TTTY10 Gene

  • Testis-Specific Transcript, Y-Linked 10 (Non-Protein Coding) 2 3
  • TTY10 3 4
  • Testis-Specific Transcript, Y-Linked 10 2
  • Non-Protein Coding RNA 133 2
  • Testis Transcript Y 10 3
  • Transcript Y 10 3
  • NCRNA00133 3

External Ids for TTTY10 Gene

ORGUL Members for TTTY10 Gene

Previous GeneCards Identifiers for TTTY10 Gene

  • GC0YM021783
  • GC0YU900012
  • GC0YM021472
  • GC0YM020969
  • GC0YM021036
  • GC0YM022628
  • GC0YM016211

Summaries for TTTY10 Gene

GeneCards Summary for TTTY10 Gene

TTTY10 (Testis-Specific Transcript, Y-Linked 10 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for TTTY10 Gene

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TTTY10 Gene

Genomics for TTTY10 Gene

Genomic Location for TTTY10 Gene

Start:
20,465,668 bp from pter
End:
20,519,228 bp from pter
Size:
53,561 bases
Orientation:
Minus strand

Genomic View for TTTY10 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TTTY10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTTY10 Gene

No data available for Regulatory Elements for TTTY10 Gene

Proteins for TTTY10 Gene

  • Protein details for TTTY10 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BZA0-TTY10_HUMAN
    Recommended name:
    Putative transcript Y 10 protein
    Protein Accession:
    Q9BZA0
    Secondary Accessions:

    Protein attributes for TTTY10 Gene

    Size:
    68 amino acids
    Molecular mass:
    7782 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TTTY10 Gene

Proteomics data for TTTY10 Gene at MOPED

Post-translational modifications for TTTY10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY10 Gene

Domains for TTTY10 Gene

Gene Families for TTTY10 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for TTTY10 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for TTTY10 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TTTY10: view

No data available for UniProtKB/Swiss-Prot for TTTY10 Gene

Function for TTTY10 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TTTY10 Gene

Localization for TTTY10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTTY10 Gene

Pathways for TTTY10 Gene

SuperPathways for TTTY10 Gene

No Data Available

Interacting Proteins for TTTY10 Gene

Gene Ontology (GO) - Biological Process for TTTY10 Gene

None

No data available for Pathways by source for TTTY10 Gene

Transcripts for TTTY10 Gene

mRNA/cDNA for TTTY10 Gene

(4) Selected AceView cDNA sequences:
(1) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TTTY10 Gene

Testis-specific transcript, Y-linked 10 (non-protein coding):
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TTTY10

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY10 Gene

No ASD Table

Relevant External Links for TTTY10 Gene

GeneLoc Exon Structure for
TTTY10
ECgene alternative splicing isoforms for
TTTY10

Expression for TTTY10 Gene

mRNA expression in normal human tissues for TTTY10 Gene

mRNA differential expression in normal tissues according to GTEx for TTTY10 Gene

This gene is overexpressed in Spleen (4.9) and Heart - Atrial Appendage (4.1).

SOURCE GeneReport for Unigene cluster for TTTY10 Gene Hs.461175

genes like me logo Genes that share expressions with TTTY10: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for TTTY10 Gene

Orthologs for TTTY10 Gene

Evolution for TTTY10 Gene

ENSEMBL:
Gene Tree for TTTY10 (if available)
TreeFam:
Gene Tree for TTTY10 (if available)

No data available for Orthologs for TTTY10 Gene

Paralogs for TTTY10 Gene

No data available for Paralogs for TTTY10 Gene

Variants for TTTY10 Gene

Sequence variations from dbSNP and Humsavar for TTTY10 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs2196155 -- 20,503,376(+) TCTCT(A/G)TTAGG intron-variant
rs9785892 -- 20,472,878(+) CATTT(A/C)GCAGA intron-variant
rs9786509 -- 20,515,523(+) TAGAA(G/T)GGTAT intron-variant
rs9786892 -- 20,484,842(+) ctaac(A/G)ttatc intron-variant
rs13303707 -- 20,513,928(+) caatt(A/C)ttgac intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TTTY10 Gene

Variant ID Type Subtype PubMed ID
nsv10025 CNV Gain 18304495

Relevant External Links for TTTY10 Gene

HapMap Linkage Disequilibrium report
TTTY10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TTTY10 Gene

Disorders for TTTY10 Gene

No disorders were found for TTTY10 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TTTY10 Gene

Publications for TTTY10 Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3 4

Products for TTTY10 Gene

Sources for TTTY10 Gene

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