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TTTY10 Gene(RNA Gene)

Testis-Specific Transcript, Y-Linked 10 (Non-Protein Coding)

GCID:
GC0YM020465
GIFtS:
16
Genes Participants
UDN Logo

Aliases for TTTY10 Gene

Subcategory (RNA class) for TTTY10 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTTY10 Gene

  • Testis-Specific Transcript, Y-Linked 10 (Non-Protein Coding) 2 3 5
  • TTY10 3 4
  • Testis-Specific Transcript, Y-Linked 10 2
  • Non-Protein Coding RNA 133 2
  • Testis Transcript Y 10 3
  • Transcript Y 10 3
  • NCRNA00133 3

External Ids for TTTY10 Gene

Previous GeneCards Identifiers for TTTY10 Gene

  • GC0YM021783
  • GC0YU900012
  • GC0YM021472
  • GC0YM020969
  • GC0YM021036
  • GC0YM022628
  • GC0YM016211

Summaries for TTTY10 Gene

GeneCards Summary for TTTY10 Gene

TTTY10 (Testis-Specific Transcript, Y-Linked 10 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TTTY10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTTY10 Gene

Genomics for TTTY10 Gene

Products:

  1. Regulatory Element

Genomic Locations for TTTY10 Gene

Genomic Locations for TTTY10 Gene
chrY:20,465,668-20,519,228
(GRCh38/hg38)
Size:
53,561 bases
Orientation:
Minus strand
chrY:22,627,554-22,681,114
(GRCh37/hg19)

Genomic View for TTTY10 Gene

Genes around TTTY10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTTY10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTTY10 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TTTY10 Gene

No data available for GeneHancer (GH) Regulatory Elements for TTTY10 Gene

Proteins for TTTY10 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for TTTY10 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BZA0-TTY10_HUMAN
    Recommended name:
    Putative transcript Y 10 protein
    Protein Accession:
    Q9BZA0

    Protein attributes for TTTY10 Gene

    Size:
    68 amino acids
    Molecular mass:
    7782 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TTTY10 Gene

Post-translational modifications for TTTY10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTTY10 Gene

Domains & Families for TTTY10 Gene

Protein Domains for TTTY10 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for TTTY10 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TTTY10: view

No data available for Gene Families and UniProtKB/Swiss-Prot for TTTY10 Gene

Function for TTTY10 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTTY10 Gene

Localization for TTTY10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TTTY10 Gene

Pathways & Interactions for TTTY10 Gene

SuperPathways for TTTY10 Gene

PathCards logo More details on SuperPathways for TTTY10
No Data Available

Interacting Proteins for TTTY10 Gene

Gene Ontology (GO) - Biological Process for TTTY10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTTY10 Gene

Drugs & Compounds for TTTY10 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TTTY10 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for TTTY10 Gene

(1) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TTTY10 Gene

Testis-specific transcript, Y-linked 10 (non-protein coding):
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TTTY10 Gene

No ASD Table

Relevant External Links for TTTY10 Gene

GeneLoc Exon Structure for
TTTY10
ECgene alternative splicing isoforms for
TTTY10

Expression for TTTY10 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TTTY10 Gene

mRNA expression in normal human tissues for TTTY10 Gene
mRNA expression by BioGPS for TTTY10 GenemRNA expression by GTEx for TTTY10 Gene

mRNA differential expression in normal tissues according to GTEx for TTTY10 Gene

This gene is overexpressed in Spleen (x4.9) and Heart - Atrial Appendage (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of TTTY10 Gene:

TTTY10

SOURCE GeneReport for Unigene cluster for TTTY10 Gene:

Hs.461175
genes like me logo Genes that share expression patterns with TTTY10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TTTY10 Gene

Orthologs for TTTY10 Gene

Evolution for TTTY10 Gene

ENSEMBL:
Gene Tree for TTTY10 (if available)
TreeFam:
Gene Tree for TTTY10 (if available)

No data available for Orthologs for TTTY10 Gene

Paralogs for TTTY10 Gene

No data available for Paralogs for TTTY10 Gene

Variants for TTTY10 Gene

Sequence variations from dbSNP and Humsavar for TTTY10 Gene

SNP ID Clin Chr 0Y pos Variation AA Info Type
rs1000356486 -- 20,517,715(-) C/G intron_variant
rs1001100953 -- 20,485,282(-) T/C intron_variant
rs1001131979 -- 20,486,510(-) C/T intron_variant
rs1001436029 -- 20,480,823(-) C/T intron_variant
rs1001466795 -- 20,481,535(-) T/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for TTTY10 Gene

Variant ID Type Subtype PubMed ID
nsv10025 CNV gain 18304495

Additional Variant Information for TTTY10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TTTY10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TTTY10 Gene

Disorders for TTTY10 Gene

Additional Disease Information for TTTY10

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for TTTY10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTTY10 Gene

Publications for TTTY10 Gene

  1. Identification of key lncRNAs in colorectal cancer progression based on associated protein-protein interaction analysis. (PMID: 28797257) Zhu H … Feng S (World journal of surgical oncology 2017) 2 3 58
  2. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H … Page DC (Nature 2003) 3 4 58

Products for TTTY10 Gene

Sources for TTTY10 Gene

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