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Aliases for TTN-AS1 Gene

Subcategory (RNA class) for TTN-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTN-AS1 Gene

  • TTN Antisense RNA 1 2 3 5
  • TTN Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TTN-AS1 Gene

Previous GeneCards Identifiers for TTN-AS1 Gene

  • GC02P179389

Summaries for TTN-AS1 Gene

GeneCards Summary for TTN-AS1 Gene

TTN-AS1 (TTN Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTN-AS1 Gene

Genomics for TTN-AS1 Gene

Regulatory Elements for TTN-AS1 Gene

Enhancers for TTN-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TTN-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TTN-AS1 Gene

Chromosome:
2
Start:
178,521,183 bp from pter
End:
178,779,963 bp from pter
Size:
258,781 bases
Orientation:
Plus strand

Genomic View for TTN-AS1 Gene

Genes around TTN-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTN-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTN-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTN-AS1 Gene

Proteins for TTN-AS1 Gene

Post-translational modifications for TTN-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTN-AS1 Gene

Domains & Families for TTN-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTN-AS1 Gene

Function for TTN-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTN-AS1 Gene

Localization for TTN-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTN-AS1 Gene

Pathways & Interactions for TTN-AS1 Gene

SuperPathways for TTN-AS1 Gene

No Data Available

Interacting Proteins for TTN-AS1 Gene

Gene Ontology (GO) - Biological Process for TTN-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTN-AS1 Gene

Drugs & Compounds for TTN-AS1 Gene

No Compound Related Data Available

Transcripts for TTN-AS1 Gene

mRNA/cDNA for TTN-AS1 Gene

(5) Additional mRNA sequences :
(72) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TTN-AS1 Gene

TTN antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TTN-AS1 Gene

No ASD Table

Relevant External Links for TTN-AS1 Gene

GeneLoc Exon Structure for
TTN-AS1
ECgene alternative splicing isoforms for
TTN-AS1

Expression for TTN-AS1 Gene

mRNA expression in normal human tissues for TTN-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TTN-AS1 Gene

This gene is overexpressed in Muscle - Skeletal (x36.9), Heart - Left Ventricle (x8.6), and Heart - Atrial Appendage (x4.4).

SOURCE GeneReport for Unigene cluster for TTN-AS1 Gene Hs.710694

genes like me logo Genes that share expression patterns with TTN-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TTN-AS1 Gene

Orthologs for TTN-AS1 Gene

Evolution for TTN-AS1 Gene

ENSEMBL:
Gene Tree for TTN-AS1 (if available)
TreeFam:
Gene Tree for TTN-AS1 (if available)

No data available for Orthologs for TTN-AS1 Gene

Paralogs for TTN-AS1 Gene

No data available for Paralogs for TTN-AS1 Gene

Variants for TTN-AS1 Gene

Sequence variations from dbSNP and Humsavar for TTN-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs3217295 -- 178,523,307(+) TGACT(-/GACT)TCCCC intron-variant, nc-transcript-variant
rs6755784 -- 178,525,015(+) ctccc(C/G)cctcc intron-variant
rs10166078 -- 178,525,428(+) gatcc(C/T)tgagg intron-variant
rs13034990 -- 178,521,513(+) ttcca(A/G)cctcc upstream-variant-2KB
rs6710877 -- 178,521,173(+) CTATA(A/C)AGAGG upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TTN-AS1 Gene

Disorders for TTN-AS1 Gene

Relevant External Links for TTN-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TTN-AS1

No disorders were found for TTN-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTN-AS1 Gene

Publications for TTN-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for TTN-AS1 Gene

Sources for TTN-AS1 Gene

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