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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

TTN Gene

protein-coding   GIFtS: 66
GCID: GC02M179355

titin

(Previous names: cardiomyopathy, dilated 1G (autosomal dominant) )
(Previous symbol: CMD1G)
 Explore 49 diseases affiliated with
TTN via our new
 Human Malady Compendium 
Biological research products
for TTN
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Titin1     EOMFC2 5
CMD1G1 2 5     HMERF2 5
LGMD2J1 2 5     FLJ320401
TMD1 2 5     Cardiomyopathy, Dilated 1G (Autosomal Dominant)1
CMH91 2     Connectin3
CMPD41 2     Connectin3
MYLK51 2     EC 2.7.11.13
Rhabdomyosarcoma Antigen MU-RMS-40.142 3     MPRM5

External Ids:    HGNC: 124031   Entrez Gene: 72732   Ensembl: ENSG000001556577   OMIM: 1888405   UniProtKB: Q8WZ423   

Export aliases for TTN gene to outside databases

Previous GC identifers: GC02M177454 GC02M178061 GC02M179593 GC02M179216 GC02M179098 GC02M171261


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for TTN:
This gene encodes a large abundant protein of striated muscle. The product of this gene is divided into two regions, a
N-terminal I-band and a C-terminal A-band. The I-band, which is the elastic part of the molecule, contains two regions
of tandem immunoglobulin domains on either side of a PEVK region that is rich in proline, glutamate, valine and
lysine. The A-band, which is thought to act as a protein-ruler, contains a mixture of immunoglobulin and fibronectin
repeats, and possesses kinase activity. An N-terminal Z-disc region and a C-terminal M-line region bind to the Z-line
and M-line of the sarcomere, respectively, so that a single titin molecule spans half the length of a sarcomere. Titin
also contains binding sites for muscle associated proteins so it serves as an adhesion template for the assembly of
contractile machinery in muscle cells. It has also been identified as a structural protein for chromosomes.
Alternative splicing of this gene results in multiple transcript variants. Considerable variability exists in the
I-band, the M-line and the Z-disc regions of titin. Variability in the I-band region contributes to the differences in
elasticity of different titin isoforms and, therefore, to the differences in elasticity of different muscle types.
Mutations in this gene are associated with familial hypertrophic cardiomyopathy 9, and autoantibodies to titin are
produced in patients with the autoimmune disease scleroderma. (provided by RefSeq, Feb 2012)

UniProtKB/Swiss-Prot: TITIN_HUMAN, Q8WZ42
Function: Key component in the assembly and functioning of vertebrate striated muscles. By providing connections at the
level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the
sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility
properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation
during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase

Gene Wiki entry for TTN (Titin)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_005403.17  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the TTN gene promoter:
         STAT1   HNF-1   STAT1beta   IRF-1   STAT1alpha   HNF-1A   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): TTN promoter sequence
   Search SABiosciences Chromatin IP Primers for TTN

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TTN


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2q31   Ensembl cytogenetic band:  2q31.2   HGNC cytogenetic band: 2q31

TTN Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TTN gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02M179355:  view genomic region     (about GC identifiers)

Start:
179,390,716 bp from pter      End:
179,695,529 bp from pter
Size:
304,814 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: TITIN_HUMAN, Q8WZ42 (See protein sequence)
Recommended Name: Titin  
Size: 34350 amino acids; 3816030 Da
Cofactor: Magnesium
Subunit: Interacts with MYOM1, MYOM2, tropomyosin and myosin. Interacts with actin, primarily via the PEVK domains and
with MYPN (By similarity). Interacts with FHL2, NEB, CRYAB, LMNA/lamin-A and LMNB/lamin-B. Interacts with
TCAP/telethonin and/or ANK1 isoform Mu17/ank1.5, via the first two N-terminal immunoglobulin domains. Interacts with
TRIM63 and TRIM55, through several domains including immunoglobulin domains 141 and 142. Interacts with ANKRD1, ANKRD2
and ANKRD23, via the region between immunoglobulin domains 77 and 78 and interacts with CAPN3, via immunoglobulin
domain 79. Interacts with NBR1 through the protein kinase domain. Interacts with CALM/calmodulin. Isoform 6 interacts
with OBSCN isoform 3. Interacts with CMYA5
Subcellular location: Cytoplasm (Probable). Nucleus
Miscellaneous: In some isoforms, after the PEVK repeat region there is a long PEVK duplicated region. On account of
this region, it has been very difficult to sequence the whole protein. The length of this region (ranging from 183 to
2174 residues), may be a key elastic element of titin
Sequence caution: Sequence=AAH58824.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A
sequence starting in position 553; Sequence=AAH70170.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence.
Potential poly-A sequence starting in position 627; Sequence=CAA62188.1; Type=Frameshift; Positions=17036, 17043;
Sequence=CAD12455.1; Type=Frameshift; Positions=17036, 17043;
6/30 PDB 3D structures from and Proteopedia for TTN (see all 30):
1BPV (3D)        1G1C (3D)        1NCT (3D)        1NCU (3D)        1TIT (3D)        1TIU (3D)    
Secondary accessions: A6NKB1 E7EQE6 E7ET18 K7ENY1 Q10465 Q10466 Q15598 Q2XUS3 Q32Q60 Q4U1Z6 Q4ZG20
Q6NSG0 Q6PDB1 Q6PJP0 Q7KYM2 Q7KYN4 Q7KYN5 Q7LDM3 Q7Z2X3 Q8TCG8 Q8WZ51 Q8WZ52 Q8WZ53 Q8WZB3 Q92761
Q92762 Q9UD97 Q9UP84 Q9Y6L9
Alternative splicing: 12 isoforms:  Q8WZ42-1   Q8WZ42-2   Q8WZ42-3   Q8WZ42-4   Q8WZ42-5   Q8WZ42-6   Q8WZ42-7   Q8WZ42-8   
Q8WZ42-9   Q8WZ42-10   Q8WZ42-11   Q8WZ42-12   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for TTN: NX_Q8WZ42

Post-translational modifications:

  • Autophosphorylated (By similarity). Phosphorylated upon DNA damage, probably by ATM or ATR1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q8WZ42

  • TTN Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (7 alternative transcripts): 
    NP_001243779.1  NP_001254479.1  NP_003310.4  NP_596869.4  NP_596870.2  NP_597676.3  NP_597681.3  

    ENSEMBL proteins: 
     ENSP00000343764   ENSP00000434586   ENSP00000467141   ENSP00000465570   ENSP00000401501  
     ENSP00000392336   ENSP00000408004   ENSP00000396805   ENSP00000399176   ENSP00000354117  
     ENSP00000405517   ENSP00000394672   ENSP00000340554   ENSP00000352154  
    Reactome Protein details: Q8WZ42
    Human Recombinant Protein Products: 
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    Uscn Proteins for TTN

    Gene Ontology (GO): 5/13 cellular component terms (GO ID links to tree view) (see all 13):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000794condensed nuclear chromosome IDA9548712
    GO:0005576extracellular region TAS--
    GO:0005634nucleus IDA--
    GO:0005730NOT nucleolus IDA--
    GO:0005737cytoplasm IDA--


    TTN for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TTN for domains           About GeneDecksing

    5/14 InterPro domains/families (see all 14):
     IPR003598 Ig_sub2
     IPR007110 Ig-like_dom
     IPR002290 Ser/Thr_dual-sp_kinase_dom
     IPR003599 Ig_sub
     IPR003961 Fibronectin_type3

    Graphical View of Domain Structure for InterPro Entry Q8WZ42

    ProtoNet protein and cluster: Q8WZ42

    2 Blocks protein families:
    IPB003598 Immunoglobulin C-2 type
    IPB008266 Tyrosine protein kinase


    UniProtKB/Swiss-Prot: TITIN_HUMAN, Q8WZ42
    Domain: ZIS1 and ZIS5 regions contain multiple SPXR consensus sites for ERK- and CDK-like protein kinases as well as
    multiple SP motifs. ZIS1 could adopt a closed conformation which would block the TCAP-binding site
    Domain: The PEVK region may serve as an entropic spring of a chain of structural folds and may also be an interaction
    site to other myofilament proteins to form interfilament connectivity in the sarcomere
    Similarity: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family
    Similarity: Contains 132 fibronectin type-III domains
    Similarity: Contains 152 Ig-like (immunoglobulin-like) domains
    Similarity: Contains 19 Kelch repeats
    Similarity: Contains 1 protein kinase domain
    Similarity: Contains 17 RCC1 repeats
    Similarity: Contains 14 TPR repeats
    Similarity: Contains 15 WD repeats


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: TITIN_HUMAN, Q8WZ42
    Function: Key component in the assembly and functioning of vertebrate striated muscles. By providing connections at the
    level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the
    sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility
    properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation
    during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Enzyme regulation: Full activation of the protein kinase domain requires both phosphorylation of Tyr-32341, preventing
    it from blocking the catalytic aspartate residue, and binding of Ca/CALM to the C-terminal regulatory tail of the
    molecule which results in ATP binding to the kinase

         Genatlas biochemistry entry for TTN:
    titin,giant sarcomeric protein,extending from the M line to the Z line of striated muscle sarcomere,essential in the
    temporal and spatial control of the assembly of the highly ordered sarcomeres of striated muscles,responsible for the
    elasticity of relaxed striated muscle

    Enzyme Number (IUBMB): EC 2.7.11.11

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    hsa-miR-522 hsa-miR-451 hsa-miR-1304 hsa-miR-144 hsa-miR-629* hsa-miR-1323 hsa-miR-532-5p hsa-miR-520g
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    Gene Ontology (GO): 5/17 molecular function terms (GO ID links to tree view) (see all 17):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0002020protease binding IPI9642272
    GO:0003676nucleic acid binding IEA--
    GO:0004674protein serine/threonine kinase activity IDA9804419
    GO:0004713protein tyrosine kinase activity IEA--
    GO:0005509calcium ion binding IDA7607248


    TTN for ontologies           About GeneDecksing


    2 GenomeRNAi human phenotypes for TTN:
     Decreased substrate adherent c  Increased cell death HMECs cel 

    Animal Models:
         Mouse knock-outs for TTN: Ttntm1.1Her Ttntm1Mgot
         13 MGI mutant phenotypes (inferred from 9 alleles(MGI details for Ttn):
     behavior/neurological  cardiovascular system  cellular  craniofacial  embryogenesis 
     growth/size  homeostasis/metabolism  immune system  mortality/aging  muscle 
     normal  skeleton  vision/eye 

    TTN for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Striated Muscle Contraction
    Striated Muscle Contraction1.00
    Muscle contraction0.65
    Striated Muscle Contraction0.87
    2Platelet degranulation
    Platelet degranulation 1.00
    Response to elevated platelet cytosolic Ca2+0.94
    3Hypertrophic cardiomyopathy (HCM)
    Hypertrophic cardiomyopathy (HCM)1.00
    Dilated cardiomyopathy0.75
    4Platelet activation, signaling and aggregation
    Platelet activation, signaling and aggregation1.00
    Hemostasis0.43

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 BioSystems Pathway for TTN 
        Striated Muscle Contraction

    5/6        Reactome Pathways for TTN (see all 6)
        Hemostasis
    Muscle contraction
    Platelet degranulation
    Platelet activation, signaling and aggregation
    Response to elevated platelet cytosolic Ca2+


    2         Kegg Pathways  (Kegg details for TTN):
        Hypertrophic cardiomyopathy (HCM)
    Dilated cardiomyopathy


    TTN for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for TTN

    5/125 Interacting proteins for TTN (Q8WZ421, 2, 3) via UniProtKB, MINT, STRING, and/or I2D (see all 125)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    OBSCNQ5VST91, 2, 3EBI-3448943,EBI-941850 MINT-7979881 MINT-7979650 MINT-7979863 MINT-7979665 MINT-7979826 MINT-7979808 MINT-7979844 I2D: score=3 
    ACTN2P356091, 2, 3EBI-3448943,EBI-928705 MINT-2882567 MINT-7899812 I2D: score=2 
    CAPN3P208071, 2, 3EBI-3448943,EBI-5655000 MINT-7990374 I2D: score=3 
    OBSL1O751472, 3MINT-7979729 MINT-7979611 MINT-7979766 MINT-7979747 MINT-7979789 MINT-7979631 MINT-7979704 MINT-7979686 I2D: score=1 
    NEBP209292, 3MINT-2882539 MINT-7032264 MINT-2882627 MINT-2882669 MINT-7032305 MINT-7032278 I2D: score=2 
    About this table

    Gene Ontology (GO): 5/27 biological process terms (GO ID links to tree view) (see all 27):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001701in utero embryonic development IEA--
    GO:0001756somitogenesis ----
    GO:0002576platelet degranulation TAS--
    GO:0003007heart morphogenesis ----
    GO:0003300cardiac muscle hypertrophy IMP11846417


    TTN for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    TTN for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for TTN

    1 HMDB Compound for TTN    About this table
    CompoundSynonyms CAS #PubMed Ids
    MagnesiumMagnesium (see all 2)7439-95-4--
    10/24 Novoseek chemical compound relationships for TTN gene (see all 24)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    ryanodine 54.5 27 11074791 (4), 9546812 (2), 14592894 (2), 16637922 (2) (see all 19)
    proline 43.5 9 8760502 (1), 16339921 (1), 9675168 (1), 8937992 (1) (see all 8)
    acetylcholine 40.5 12 9521611 (1), 9854961 (1), 14592910 (1), 16720217 (1) (see all 12)
    actomyosin 40.1 8 12815860 (3), 16453158 (2), 8534821 (1)
    leupeptin 37 3 11519738 (1), 9648223 (1), 8276755 (1)
    valine 31.6 5 8760502 (1), 16339921 (1), 9675168 (1), 10364572 (1)
    pip2 23.5 5 15833278 (1), 9657390 (1)
    lysine 21.5 5 8760502 (1), 16339921 (1), 9675168 (1), 10364572 (1)
    ethyl methanesulfonate 14.9 1 15259051 (1)
    calcium 14.8 36 18690715 (6), 11519738 (4), 14706862 (3), 14593205 (1) (see all 18)

    Search CenterWatch for drugs/clinical trials and news about TTN / TITIN 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
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    About This Section

    REFSEQ mRNAs for TTN gene (7 alternative transcripts): 
    NM_001256850.1  NM_001267550.1  NM_003319.4  NM_133378.4  NM_133379.4  NM_133432.3  NM_133437.3  

    Unigene Cluster for TTN:

    Titin
    Hs.134602  [show with all ESTs]
    Unigene Representative Sequence: NM_001267550
    15 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000342992(uc002umw.1 uc002una.1 uc010frf.1 uc010fre.1 uc002umz.1 uc021vsy.1)
    ENST00000460472(uc002umq.3 uc021vtb.1) ENST00000589042 ENST00000591111
    ENST00000414766 ENST00000426232 ENST00000446966(uc002umx.1) ENST00000425332(uc010zfk.1)
    ENST00000448510 ENST00000360870(uc010frg.1 uc002unb.2) ENST00000436599
    ENST00000470257(uc002und.3) ENST00000412264 ENST00000342175(uc021vsz.1)
    ENST00000359218(uc021vta.1)

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    Additional cDNA sequence: 

    AF321609.2 AF525413.1 AK056602.1 AK090903.1 AK091732.1 AK092284.1 AK096883.1 AK125056.1 
    AK129531.1 AK129757.1 AK129919.1 AL713647.1 AL832094.1 AL832351.1 AL833110.1 AL833292.1 
    BC013396.2 BC017983.1 BC026297.1 BC029400.1 BC030823.1 BC058824.1 BC070170.1 BC107797.1 
    BX537998.1 DQ248309.1 EF212153.1 EF212154.1 EF212155.1 EF212156.1 EU428784.1 X64697.1 
    X64698.1 X69490.1 X83270.1 X90568.1 X90569.1 X98114.1 X98115.1 

    24/59 DOTS entries (see all 59):

    DT.40305982  DT.87017845  DT.91943853  DT.102839578  DT.75106611  DT.100042202  DT.120958407  DT.120958414 
    DT.91775084  DT.120958266  DT.95208755  DT.100664174  DT.75136394  DT.120958289  DT.120958437  DT.220534 
    DT.95152671  DT.100042738  DT.100651430  DT.100913562  DT.101985634  DT.411096  DT.432606  DT.100642525 

    24/481 AceView cDNA sequences (see all 481):

    AI803531 F36665 AI332429 AI269724 BX507270 BX501046 X83270 BX500025 
    BX501304 BQ926050 AA086447 CF552750 BX953355 F28302 BU743014 BX096752 
    F34840 BC058824 AI051675 AJ710712 AI338273 F16872 CF552550 F27402 

    GeneLoc Exon Structure

    5/38 Alternative Splicing Database (ASD) splice patterns (SP) for TTN (see all 38)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22a · 22b ^ 23a ·
    SP1:                                                                                                                                                            
    SP2:                                                                                                                                                            
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                                            

    ExUns: 23b · 23c ^ 24a · 24b ^ 25a · 25b ^ 26 ^ 27 ^ 28a · 28b ^ 29 ^ 30 ^ 31 ^ 32 ^ 33 ^ 34 ^ 35 ^ 36 ^ 37 ^ 38 ^ 39 ^ 40 ^ 41 ^ 42 ^ 43 ^ 44 ^
    SP1:                                                                                                                                                            
    SP2:                                                                                                                                                            
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                                            

    ExUns: 45 ^ 46 ^ 47 ^ 48 ^ 49 ^ 50 ^ 51 ^ 52 ^ 53 ^ 54 ^ 55 ^ 56 ^ 57 ^ 58 ^ 59a · 59b ^ 60a · 60b ^ 61 ^ 62 ^ 63 ^ 64a · 64b ^ 65 ^ 66 ^ 67 ^
    SP1:                                                                                                                                                            
    SP2:                                                                                                                                                            
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                                            

    ExUns: 68 ^ 69 ^ 70 ^ 71 ^ 72 ^ 73 ^ 74 ^ 75 ^ 76 ^ 77 ^ 78 ^ 79 ^ 80 ^ 81 ^ 82 ^ 83a · 83b ^ 84 ^ 85 ^ 86 ^ 87 ^ 88 ^ 89 ^ 90 ^ 91 ^ 92 ^
    SP1:                                                                                                        -     -     -     -                                 
    SP2:                                                                                                                                                            
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                                            

    ExUns: 93 ^ 94a · 94b ^ 95 ^ 96a · 96b · 96c ^ 97 ^ 98 ^ 99 ^ 100 ^ 101 ^ 102 ^ 103 ^ 104 ^ 105 ^ 106 ^ 107 ^ 108 ^ 109 ^ 110 ^ 111 ^ 112 ^ 113 ^ 114 ^ 115 ^
    SP1:                    -                                                                                                                                       
    SP2:                                                                                                                                                            
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                                            

    ExUns: 116 ^ 117 ^ 118 ^ 119 ^ 120 ^ 121 ^ 122 ^ 123 ^ 124 ^ 125 ^ 126 ^ 127 ^ 128 ^ 129 ^ 130 ^ 131a · 131b ^ 132a · 132b ^ 133 ^ 134 ^ 135 ^ 136 ^ 137 ^ 138 ^ 139 ^
    SP1:                                                                                                                                                            
    SP2:                                                                                                                                                            
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                                            

    ExUns: 140 ^ 141a · 141b ^ 142 ^ 143 ^ 144 ^ 145 ^ 146 ^ 147 ^ 148 ^ 149 ^ 150a · 150b ^ 151a · 151b · 151c ^ 152a · 152b ^ 153a · 153b ^ 154 ^ 155 ^ 156 ^ 157 ^ 158 ^ 159 ^
    SP1:                                                                                                                                                            
    SP2:                                                                                                                                                            
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                                            

    ExUns: 160 ^ 161 ^ 162 ^ 163 ^ 164 ^ 165 ^ 166 ^ 167 ^ 168 ^ 169 ^ 170 ^ 171 ^ 172 ^ 173 ^ 174 ^ 175 ^ 176 ^ 177 ^ 178 ^ 179a ·
    SP1:                                                                                                                        
    SP2:                                                                                                                        
    SP3:                                                                                                                        
    SP4:                                                                                                                        
    SP5:                                                                                                                        


    ECgene alternative splicing isoforms for TTN

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TTN expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CAAGTATAAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    TTN expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    10/24 LifeMap In Vivo Development Anatomical Compartments/Cells (see all 24
    Tissue Anatomical Compartment CellCategory (developmental path)
    HeartMyocardiumCardiomyocytesMyocardium
    LimbForelimb Dorsal MusclesMultinuclear MyocytesSkeletal Muscle
    LimbForelimb Ventral MusclesMultinuclear MyocytesSkeletal Muscle
    LimbHindlimb Dorsal MuscleMultinuclear MyocytesSkeletal Muscle
    LimbHindlimb Ventral MuscleMultinuclear MyocytesSkeletal Muscle
    Skeletal MuscleAnterior Neck MusclesMultinuclear MyocytesSkeletal Muscle
    Skeletal MuscleCervical Back MusclesMultinuclear MyocytesSkeletal Muscle
    Skeletal MuscleLumbar Back MusclesMultinuclear MyocytesSkeletal Muscle
    Skeletal MuscleLumbar Vertebrae Column MusclesMultinuclear MyocytesSkeletal Muscle
    Skeletal MusclePelvic MusclesMultinuclear MyocytesSkeletal Muscle
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 2 LifeMap Cells 
    NameCategory
    Pancreatic endoderm/endocrine precursor-like cells (A scalable, suspensi...)
    Cardiomyocyte-like progenitor cells (Derivation of cardio...)

    See TTN Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for TTN

    SOURCE GeneReport for Unigene cluster: Hs.134602

    UniProtKB/Swiss-Prot: TITIN_HUMAN, Q8WZ42
    Tissue specificity: Isoforms 3, 7 and 8 are expressed in cardiac muscle. Isoform 4 is expressed in vertebrate skeletal
    muscle. Isoform 6 is expressed in skeletal muscle (at protein level)

        SABiosciences Expression via Pathway-Focused PCR Arrays including TTN: 
              Interferons & Receptors in human mouse rat
              Oxidative Stress in human mouse rat
              Nitric Oxide Signaling Pathway in human mouse rat
              Skeletal Muscle: Myogenesis & Myopathy in human mouse rat
              Inflammatory Response & Autoimmunity 384HT in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TTN
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat TTN
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TTN
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TTN
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TTN

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for TTN gene from 5/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves TTN1 titin 74.67(n)
    77.68(a)
      424126  XM_421979.3  XP_421979.3 
    lizard
    (Anolis carolinensis)
    Reptilia TTN6
    --
    76(a)
    1 ↔ 1
    GL343320.1(716205-944482)
    African clawed frog
    (Xenopus laevis)
    Amphibia 480534122   -- 76.61(n)    48053412 
    zebrafish
    (Danio rerio)
    Actinopterygii AY081167.12   -- 78.18(n)   317731  AY081167.1 
    worm
    (Caenorhabditis elegans)
    Secernentea F21C10.73   -- 40(a)
    (best of 3)
      V(9115384-9124640)   --


    ENSEMBL Gene Tree for TTN (if available)
    TreeFam Gene Tree for TTN (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for TTN gene
    STK17B2  DAPK22  MYLK22  MYLK32  STK17A2  OBSCN2  DAPK32  SPEG2  
    MYLK42  DAPK12  MYLK2  OBSL12  
    18/52 SIMAP similar genes for TTN using alignment to 13 protein entries:     TITIN_HUMAN (see all proteins) (see all similar genes):
    MYLK4    ROBO1    STK17B    BRSK2    DAPK3    STK17A
    CAMK2A    DAPK1    PRKD1    MYLK    DAPK2    RPS6KA1
    PALLD    CAMK4    PRKCH    DKFZp686I10125    FGFR3    PHKG2

    TTN for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for TTN
    PGOHUM00000240442


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/4734 NCBI SNPs in TTN are shown (see all 4734    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs2676071561,2
    Cpathogenic179391848(-) AACCCC/TGATCA 14 P L mis1 int10--------
    rs1478792661,2
    C,pathogenic179602841(+) TGACAC/TTGCCA 12 N S mis10--------
    rs2676071581,2
    Cpathogenic179604852(-) AAGTGC/TAGGAG 11 Q * stg1 int10--------
    rs2676071551,2
    Cpathogenic179647707(-) TGACAA/C/TGGTAC 21 R W mis10--------
    rs2676071571,2
    Cpathogenic179650717(-) TTCCGC/TCGCAA 14 A V mis10--------
    rs289334051,2
    Cpathogenic179650726(-) GGAACG/TCATTT 14 R L mis10--------
    rs1380600321,2
    C,Fpathogenic179664293(+) CTGCCG/AAGCCA 14 /R /W mis12Minor allele frequency- A:0.00NA EU 5875
    rs1395177321,2
    C,pathogenic179667000(+) CTGCAC/TGCCGG 14 M V mis10--------
    rs1463598661,2
    Cother179611813(+) AATATC/TGCTCT 8 Q R int1 mis11Minor allele frequency- T:0.00NA 4272
    rs1508204031,2
    Cother179615320(+) GTTTTC/TGAAAA 8 Q R int1 mis11Minor allele frequency- T:0.00NA 3836

    HapMap Linkage Disequilibrium report for TTN (179390716 - 179640716 bp, first 250kb of TTN)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 4 variations for TTN
         4 CNVs: 32383 3400 4319 68206
    Human Gene Mutation Database (HGMD): TTN

    Locus Specific Mutation Databases (LSDB): TTN

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing TTN
    DNA2.0 Custom Variant and Variant Library Synthesis for TTN

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TTN for disorders           About GeneDecksing

    OMIM gene information: 188840   
    OMIM disorders: 188840  604145  600334  608807  603689  611705  
    UniProtKB/Swiss-Prot: TITIN_HUMAN, Q8WZ42
  • Defects in TTN are the cause of hereditary myopathy with early respiratory failure (HMERF) [MIM:603689]; also
  • known as Edstrom myopathy. HMERF is an autosomal dominant, adult-onset myopathy with early respiratory muscle
    involvement
  • Defects in TTN are the cause of familial hypertrophic cardiomyopathy type 9 (CMH9) [MIM:613765]. Familial
  • hypertrophic cardiomyopathy is a hereditary heart disorder characterized by ventricular hypertrophy, which is usually
    asymmetric and often involves the interventricular septum. The symptoms include dyspnea, syncope, collapse,
    palpitations, and chest pain. They can be readily provoked by exercise. The disorder has inter- and intrafamilial
    variability ranging from benign to malignant forms with high risk of cardiac failure and sudden cardiac death
  • Defects in TTN are the cause of cardiomyopathy dilated type 1G (CMD1G) [MIM:604145]. Dilated cardiomyopathy is
  • a disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure
    and arrhythmia. Patients are at risk of premature death
  • Defects in TTN are the cause of tardive tibial muscular dystrophy (TMD) [MIM:600334]; also known as Udd
  • myopathy. TMD is an autosomal dominant, late-onset distal myopathy. Muscle weakness and atrophy are usually confined
    to the anterior compartment of the lower leg, in particular the tibialis anterior muscle. Clinical symptoms usually
    occur at age 35-45 years or much later
  • Defects in TTN are the cause of limb-girdle muscular dystrophy type 2J (LGMD2J) [MIM:608807]. LGMD2J is an
  • autosomal recessive degenerative myopathy characterized by progressive weakness of the pelvic and shoulder girdle
    muscles. Severe disability is observed within 20 years of onset
  • Defects in TTN are the cause of early-onset myopathy with fatal cardiomyopathy (EOMFC) [MIM:611705].
  • Early-onset myopathies are inherited muscle disorders that manifest typically from birth or infancy with hypotonia,
    muscle weakness, and delayed motor development. EOMFC is a titinopathy that, in contrast with the previously described
    examples, involves both heart and skeletal muscle, has a congenital onset, and is purely recessive. This phenotype is
    due to homozygous out-of-frame TTN deletions, which lead to a total absence of titin's C-terminal end from striated
    muscles and to secondary CAPN3 depletion

    20/49 diseases for TTN (see all 49):    About MalaCards
    cardiomyopathy, dilated, 1g    cardiomyopathy    familial hypertrophic cardiomyopathy    hypertrophic cardiomyopathy
    limb-girdle muscular dystrophy type 2j    limb-girdle muscular dystrophy    morvan's fibrillary chorea    lambert-eaton myasthenic syndrome
    cardiomyopathy, familial hypertrophic, 9    tibial muscular dystrophy    muscular dystrophy    rhabdomyosarcoma
    alveolar soft part sarcoma    newborn respiratory distress syndrome    hereditary myopathy with early respiratory failure    centronuclear myopathy
    rippling muscle disease    myasthenia gravis    salih myopathy    myopathy

    10 diseases from the University of Copenhagen DISEASES database for TTN:
    Myopathy     Thymoma     Neuropathy     Newborn respiratory distress syndrome
    Dilated cardiomyopathy     Hypertrophic cardiomyopathy     Familial hypertrophic cardiomyopathy     Hypersensitivity reaction type II disease
    Meconium aspiration syndrome     Diastolic heart failure

    10/41 Novoseek disease relationships for TTN gene (see all 41)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    lgmd2a 80.4 15 10987085 (2), 14959561 (1), 9642272 (1), 11294923 (1) (see all 7)
    lgmd2g 78.1 6 14959561 (1), 15316618 (1), 12379311 (1)
    myasthenia gravis 75.5 31 9467662 (3), 11766610 (2), 11063835 (2), 9065023 (2) (see all 24)
    thymoma 73.5 59 9451594 (4), 10896269 (4), 11182151 (4), 11706095 (4) (see all 23)
    muscular dystrophy limb-girdle 72.8 4 16115818 (1), 8537379 (1), 18477606 (1), 15043707 (1)
    lgmd1a 68.8 2 15316618 (1)
    distal myopathies 67.9 5 17337483 (2), 15728284 (1), 16793270 (1), 18948003 (1)
    lgmd2h 67.3 4 14959561 (1), 15316618 (1)
    muscular dystrophies 64.7 19 11829483 (3), 16115818 (2), 11294923 (1), 8064303 (1) (see all 12)
    lgmd2f 64.6 4 14959561 (1), 15316618 (1)

    GeneTests: TTN
    Familial Hypertrophic Cardiomyopathy
    Dilated Cardiomyopathy
    Udd Distal Myopathy

    Human Genome Epidemiology (HuGE) Navigator: TTN (9 documents)

    Export disorders for TTN gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for TTN gene, integrated from 9 sources (see all 477):
    (articles sorted by number of sources associating them with TTN)
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    1. Familial dilated cardiomyopathy locus maps to chromosome 2q31. (PubMed id 10051295)1, 2, 3 Siu B.L.... Seidman C.E. (1999)
    2. Functional analysis of titin/connectin N2-B mutations found in cardiomyopathy. (PubMed id 16465475)1, 2, 9 Matsumoto Y.... Kimura A. (2005)
    3. Tibial muscular dystrophy is a titinopathy caused by mutations in TTN, the gene encoding the giant skeletal-muscle protein titin. (PubMed id 12145747)1, 2, 9 Hackman P.... Udd B. (2002)
    4. Mutations of TTN, encoding the giant muscle filament titin, cause familial dilated cardiomyopathy. (PubMed id 11788824)1, 2, 9 Gerull B.... Thierfelder L. (2002)
    5. Titin mutations as the molecular basis for dilated cardiomyopathy. (PubMed id 11846417)1, 2, 9 Itoh-Satoh M.... Kimura A. (2002)
    6. Series of exon-skipping events in the elastic spring region of titin as the structural basis for myofibrillar elastic diversity. (PubMed id 10850961)1, 2, 9 Freiburg A.... Labeit S. (2000)
    7. Association of the chaperone alphaB-crystallin with titin in heart muscle. (PubMed id 14676215)1, 2, 9 Bullard B.... Linke W.A. (2004)
    8. Structural evidence for a possible role of reversible disulphide bridge formation in the elasticity of the muscle protein titin. (PubMed id 11525170)1, 2, 9 Mayans O.... Wilmanns M. (2001)
    9. The three-dimensional structure of a type I module from titin: a prototype of intracellular fibronectin type III domains. (PubMed id 9782056)1, 2, 9 Goll C.M.... Nilges M. (1998)
    10. Titins, giant proteins in charge of muscle ultrastructure and elasticity. (PubMed id 7569978)1, 2, 9 Labeit S. and Kolmerer B. (1995)

    (in PubMed, OMIM, and NCBI Bookshelf)
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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 7273 HGNC: 12403 AceView: TTN Ensembl:ENSG00000155657 euGenes: HUgn7273
    ECgene: TTN Kegg: 7273 H-InvDB: TTN

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for TTN Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for TTN Genetics and Cytogenetics in Oncology and Haematology
    GeneReviewshttp://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/TTN
    Wikipedia http://en.wikipedia.org/wiki/Titin

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for TTN gene:
    Search GeneIP for patents involving TTN

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