TTN Gene
protein-coding GIFtS : 66
GCID: GC02 M179355
titin (Previous names: cardiomyopathy, dilated 1G (autosomal dominant) ) (Previous symbol: CMD1G )
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Aliasesfor TTN gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Titin 1 EOMFC2 5 CMD1G1 2 5 HMERF2 5 LGMD2J1 2 5 FLJ320401 TMD1 2 5 Cardiomyopathy, Dilated 1G (Autosomal Dominant)1 CMH91 2 Connectin3 CMPD41 2 Connectin3 MYLK51 2 EC 2.7.11.13 Rhabdomyosarcoma Antigen MU-RMS-40.142 3 MPRM5
Export aliases for TTN gene to outside databases Previous GC identifers: GC02M177454 GC02M178061 GC02M179593 GC02M179216 GC02M179098 GC02M171261
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Summariesfor TTN gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for TTN : This gene encodes a large abundant protein of striated muscle. The product of this gene is divided into two regions, a N-terminal I-band and a C-terminal A-band. The I-band, which is the elastic part of the molecule, contains two regions of tandem immunoglobulin domains on either side of a PEVK region that is rich in proline, glutamate, valine and lysine. The A-band, which is thought to act as a protein-ruler, contains a mixture of immunoglobulin and fibronectin repeats, and possesses kinase activity. An N-terminal Z-disc region and a C-terminal M-line region bind to the Z-line and M-line of the sarcomere, respectively, so that a single titin molecule spans half the length of a sarcomere. Titin also contains binding sites for muscle associated proteins so it serves as an adhesion template for the assembly of contractile machinery in muscle cells. It has also been identified as a structural protein for chromosomes. Alternative splicing of this gene results in multiple transcript variants. Considerable variability exists in the I-band, the M-line and the Z-disc regions of titin. Variability in the I-band region contributes to the differences in elasticity of different titin isoforms and, therefore, to the differences in elasticity of different muscle types. Mutations in this gene are associated with familial hypertrophic cardiomyopathy 9, and autoantibodies to titin are produced in patients with the autoimmune disease scleroderma. (provided by RefSeq, Feb 2012) UniProtKB/Swiss-Prot: TITIN_HUMAN, Q8WZ42 Function : Key component in the assembly and functioning of vertebrate striated muscles. By providing connections at thelevel of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase Gene Wiki entry for TTN (Titin)
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Genomic Viewsfor TTN gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000002.11 NC_018913.1 NT_005403.17 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the TTN gene promoter: STAT1 HNF-1 STAT1beta IRF-1 STAT1alpha HNF-1A Other transcription factors Search SABiosciences Chromatin IP Primers for TTN Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TTN
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 2q31 Ensembl cytogenetic band: 2q31.2 HGNC cytogenetic band: 2q31 TTN Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02M179355: view genomic region
(about GC identifiers )
Start:
179,390,716 bp from pter
End:
179,695,529 bp from pter
Size:
304,814 bases
Orientation:
minus strand
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Proteinsfor TTN gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: TITIN_HUMAN, Q8WZ42 (See
protein sequence )Recommended Name: Titin Size : 34350 amino acids; 3816030 Da
Cofactor : Magnesium
Subunit : Interacts with MYOM1, MYOM2, tropomyosin and myosin. Interacts with actin, primarily via the PEVK domains andwith MYPN (By similarity). Interacts with FHL2, NEB, CRYAB, LMNA/lamin-A and LMNB/lamin-B. Interacts with TCAP/telethonin and/or ANK1 isoform Mu17/ank1.5, via the first two N-terminal immunoglobulin domains. Interacts with TRIM63 and TRIM55, through several domains including immunoglobulin domains 141 and 142. Interacts with ANKRD1, ANKRD2 and ANKRD23, via the region between immunoglobulin domains 77 and 78 and interacts with CAPN3, via immunoglobulin domain 79. Interacts with NBR1 through the protein kinase domain. Interacts with CALM/calmodulin. Isoform 6 interacts with OBSCN isoform 3. Interacts with CMYA5
Subcellular location : Cytoplasm (Probable). Nucleus
Miscellaneous : In some isoforms, after the PEVK repeat region there is a long PEVK duplicated region. On account ofthis region, it has been very difficult to sequence the whole protein. The length of this region (ranging from 183 to 2174 residues), may be a key elastic element of titin
Sequence caution : Sequence=AAH58824.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-Asequence starting in position 553; Sequence=AAH70170.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence starting in position 627; Sequence=CAA62188.1; Type=Frameshift; Positions=17036, 17043; Sequence=CAD12455.1; Type=Frameshift; Positions=17036, 17043;
6/30 PDB 3D structures from and Proteopedia for TTN (see all 30 ):1BPV (3D)
  1G1C (3D)
  1NCT (3D)
  1NCU (3D)
  1TIT (3D)
  1TIU (3D)
 
Secondary accessions : A6NKB1 E7EQE6 E7ET18 K7ENY1 Q10465 Q10466 Q15598 Q2XUS3 Q32Q60 Q4U1Z6 Q4ZG20Q6NSG0 Q6PDB1 Q6PJP0 Q7KYM2 Q7KYN4 Q7KYN5 Q7LDM3 Q7Z2X3 Q8TCG8 Q8WZ51 Q8WZ52 Q8WZ53 Q8WZB3 Q92761 Q92762 Q9UD97 Q9UP84 Q9Y6L9 Alternative splicing : 12 isoforms : Q8WZ42-1 Q8WZ42-2 Q8WZ42-3 Q8WZ42-4 Q8WZ42-5 Q8WZ42-6 Q8WZ42-7 Q8WZ42-8 Q8WZ42-9 Q8WZ42-10 Q8WZ42-11 Q8WZ42-12 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for TTN: NX_Q8WZ42 Post-translational modifications:
Autophosphorylated (By similarity). Phosphorylated upon DNA damage, probably by ATM or ATR1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q8WZ42 TTN Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (7 alternative transcripts):
NP_001243779.1 NP_001254479.1 NP_003310.4 NP_596869.4 NP_596870.2 NP_597676.3 NP_597681.3 ENSEMBL proteins: ENSP00000343764 ENSP00000434586 ENSP00000467141 ENSP00000465570 ENSP00000401501 ENSP00000392336 ENSP00000408004 ENSP00000396805 ENSP00000399176 ENSP00000354117 ENSP00000405517 ENSP00000394672 ENSP00000340554 ENSP00000352154 Reactome Protein details: Q8WZ42 Human Recombinant Protein Products: Gene Ontology (GO): 5/13 cellular component terms (GO ID links to tree view) (see all 13 ): About this table
TTN for ontologies About GeneDecksing TTN Antibody Products: Assay Products for TTN:
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Protein
Domains / Familiesfor TTN gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
TTN for domains About GeneDecksing 5/14 InterPro domains/families (see all 14 ):
Graphical View of Domain Structure for InterPro Entry Q8WZ42 ProtoNet protein and cluster: Q8WZ42
2 Blocks protein families : IPB003598 Immunoglobulin C-2 type IPB008266 Tyrosine protein kinase UniProtKB/Swiss-Prot: TITIN_HUMAN, Q8WZ42 Domain : ZIS1 and ZIS5 regions contain multiple SPXR consensus sites for ERK- and CDK-like protein kinases as well asmultiple SP motifs. ZIS1 could adopt a closed conformation which would block the TCAP-binding site Domain : The PEVK region may serve as an entropic spring of a chain of structural folds and may also be an interactionsite to other myofilament proteins to form interfilament connectivity in the sarcomere Similarity : Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase familySimilarity : Contains 132 fibronectin type-III domainsSimilarity : Contains 152 Ig-like (immunoglobulin-like) domainsSimilarity : Contains 19 Kelch repeatsSimilarity : Contains 1 protein kinase domainSimilarity : Contains 17 RCC1 repeatsSimilarity : Contains 14 TPR repeatsSimilarity : Contains 15 WD repeats
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Functionfor TTN gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: TITIN_HUMAN, Q8WZ42 Function : Key component in the assembly and functioning of vertebrate striated muscles. By providing connections at thelevel of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase Catalytic activity : ATP + a protein = ADP + a phosphoproteinEnzyme regulation : Full activation of the protein kinase domain requires both phosphorylation of Tyr-32341, preventingit from blocking the catalytic aspartate residue, and binding of Ca/CALM to the C-terminal regulatory tail of the molecule which results in ATP binding to the kinase
Genatlas biochemistry entry for TTN : titin,giant sarcomeric protein,extending from the M line to the Z line of striated muscle sarcomere,essential in the temporal and spatial control of the assembly of the highly ordered sarcomeres of striated muscles,responsible for the elasticity of relaxed striated muscle Enzyme Number (IUBMB): EC 2.7.11.1 1 Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for TTN OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for TTNOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): TTN (NM_138565 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for TTN Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat TTN
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TTN
Gene Ontology (GO): 5/17 molecular function terms (GO ID links to tree view) (see all 17 ): About this table
TTN for ontologies About GeneDecksing 2 GenomeRNAi human phenotypes for TTN :Animal Models: Mouse knock-outs for TTN: Ttn tm1.1Her Ttn tm1Mgot 13 MGI mutant phenotypes (inferred from 9 alleles ) (MGI details for Ttn) :
TTN for phenotypes About GeneDecksing
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Pathways & Interactionsfor TTN gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 Striated Muscle Contraction 2 Platelet degranulation 3 Hypertrophic cardiomyopathy (HCM) 4 Platelet activation, signaling and aggregation
Pathway sources See GeneCards unified pathways Show all pathways 1 BioSystems Pathway for TTN 5/6
Reactome Pathways for TTN (see all 6 )2
Kegg Pathways (Kegg details for TTN) :
TTN for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for TTN 5/125 Interacting proteins for TTN (Q8WZ42 1 , 2 , 3 ) via UniProtKB, MINT, STRING, and/or I2D (see all 125 )Interactant Interaction Details GeneCard External ID(s) OBSCN Q5VST9 1 , 2 , 3 EBI-3448943,EBI-941850 MINT-7979881 MINT-7979650 MINT-7979863 MINT-7979665 MINT-7979826 MINT-7979808 MINT-7979844 I2D:
score=3 ACTN2 P35609 1 , 2 , 3 EBI-3448943,EBI-928705 MINT-2882567 MINT-7899812 I2D:
score=2 CAPN3 P20807 1 , 2 , 3 EBI-3448943,EBI-5655000 MINT-7990374 I2D:
score=3 OBSL1 O75147 2 , 3 MINT-7979729 MINT-7979611 MINT-7979766 MINT-7979747 MINT-7979789 MINT-7979631 MINT-7979704 MINT-7979686 I2D:
score=1 NEB P20929 2 , 3 MINT-2882539 MINT-7032264 MINT-2882627 MINT-2882669 MINT-7032305 MINT-7032278 I2D:
score=2
About this table Gene Ontology (GO): 5/27 biological process terms (GO ID links to tree view) (see all 27 ): About this table
TTN for ontologies About GeneDecksing
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Drugs & Compoundsfor TTN gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
TTN for compounds About GeneDecksing Browse Tocris compounds for TTN 1 HMDB Compound for TTN About this table 10/24 Novoseek chemical compound relationships for TTN gene (see all 24 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
ryanodine
54.5
27
11074791 (4), 9546812 (2), 14592894 (2), 16637922 (2) (see all 19 )
proline
43.5
9
8760502 (1), 16339921 (1), 9675168 (1), 8937992 (1) (see all 8 )
acetylcholine
40.5
12
9521611 (1), 9854961 (1), 14592910 (1), 16720217 (1) (see all 12 )
actomyosin
40.1
8
12815860 (3), 16453158 (2), 8534821 (1)
leupeptin
37
3
11519738 (1), 9648223 (1), 8276755 (1)
valine
31.6
5
8760502 (1), 16339921 (1), 9675168 (1), 10364572 (1)
pip2
23.5
5
15833278 (1), 9657390 (1)
lysine
21.5
5
8760502 (1), 16339921 (1), 9675168 (1), 10364572 (1)
ethyl methanesulfonate
14.9
1
15259051 (1)
calcium
14.8
36
18690715 (6), 11519738 (4), 14706862 (3), 14593205 (1) (see all 18 )
Search CenterWatch for drugs/clinical trials and news about TTN / TITIN
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Transcriptsfor TTN gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for TTN gene (7 alternative transcripts): NM_001256850.1 NM_001267550.1 NM_003319.4 NM_133378.4 NM_133379.4 NM_133432.3 NM_133437.3 Unigene Cluster for TTN:
Titin Hs.134602 [show with all ESTs ] Unigene Representative Sequence: NM_001267550 15 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000342992 (uc002umw.1 uc002una.1 uc010frf.1 uc010fre.1 uc002umz.1 uc021vsy.1 )ENST00000460472 (uc002umq.3 uc021vtb.1 ) ENST00000589042 ENST00000591111 ENST00000414766 ENST00000426232 ENST00000446966 (uc002umx.1 ) ENST00000425332 (uc010zfk.1 )ENST00000448510 ENST00000360870 (uc010frg.1 uc002unb.2 ) ENST00000436599 ENST00000470257 (uc002und.3 ) ENST00000412264 ENST00000342175 (uc021vsz.1 )ENST00000359218 (uc021vta.1 ) Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for TTN OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for TTNOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): TTN (NM_138565 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for TTN Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat TTN
Additional cDNA sequence: AF321609.2 AF525413.1 AK056602.1 AK090903.1 AK091732.1 AK092284.1 AK096883.1 AK125056.1 AK129531.1 AK129757.1 AK129919.1 AL713647.1 AL832094.1 AL832351.1 AL833110.1 AL833292.1 BC013396.2 BC017983.1 BC026297.1 BC029400.1 BC030823.1 BC058824.1 BC070170.1 BC107797.1 BX537998.1 DQ248309.1 EF212153.1 EF212154.1 EF212155.1 EF212156.1 EU428784.1 X64697.1 X64698.1 X69490.1 X83270.1 X90568.1 X90569.1 X98114.1 X98115.1
24/59 DOTS entries (see all 59 ): DT.40305982 DT.87017845
DT.91943853 DT.102839578 DT.75106611 DT.100042202 DT.120958407 DT.120958414 DT.91775084 DT.120958266 DT.95208755 DT.100664174 DT.75136394 DT.120958289 DT.120958437 DT.220534 DT.95152671 DT.100042738 DT.100651430 DT.100913562 DT.101985634 DT.411096 DT.432606 DT.100642525 24/481 AceView cDNA sequences (see all 481 ):
AI803531 F36665 AI332429 AI269724 BX507270 BX501046 X83270 BX500025 BX501304 BQ926050 AA086447 CF552750 BX953355 F28302 BU743014 BX096752 F34840 BC058824 AI051675 AJ710712 AI338273 F16872 CF552550 F27402 GeneLoc Exon Structure 5/38 Alternative Splicing Database (ASD) splice patterns (SP) for TTN (see all 38 ) About this scheme ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22a · 22b ^ 23a · SP1 :                                                     SP2 :                                                     SP3 :                                                     SP4 :                                                     SP5 :                                                    
ExUns: 23b · 23c ^ 24a · 24b ^ 25a · 25b ^ 26 ^ 27 ^ 28a · 28b ^ 29 ^ 30 ^ 31 ^ 32 ^ 33 ^ 34 ^ 35 ^ 36 ^ 37 ^ 38 ^ 39 ^ 40 ^ 41 ^ 42 ^ 43 ^ 44 ^ SP1 :                                                     SP2 :                                                     SP3 :                                                     SP4 :                                                     SP5 :                                                    
ExUns: 45 ^ 46 ^ 47 ^ 48 ^ 49 ^ 50 ^ 51 ^ 52 ^ 53 ^ 54 ^ 55 ^ 56 ^ 57 ^ 58 ^ 59a · 59b ^ 60a · 60b ^ 61 ^ 62 ^ 63 ^ 64a · 64b ^ 65 ^ 66 ^ 67 ^ SP1 :                                                     SP2 :                                                     SP3 :                                                     SP4 :                                                     SP5 :                                                    
ExUns: 68 ^ 69 ^ 70 ^ 71 ^ 72 ^ 73 ^ 74 ^ 75 ^ 76 ^ 77 ^ 78 ^ 79 ^ 80 ^ 81 ^ 82 ^ 83a · 83b ^ 84 ^ 85 ^ 86 ^ 87 ^ 88 ^ 89 ^ 90 ^ 91 ^ 92 ^ SP1 :                                   -   -   -   -             SP2 :                                                     SP3 :                                                     SP4 :                                                     SP5 :                                                    
ExUns: 93 ^ 94a · 94b ^ 95 ^ 96a · 96b · 96c ^ 97 ^ 98 ^ 99 ^ 100 ^ 101 ^ 102 ^ 103 ^ 104 ^ 105 ^ 106 ^ 107 ^ 108 ^ 109 ^ 110 ^ 111 ^ 112 ^ 113 ^ 114 ^ 115 ^ SP1 :       -                                               SP2 :                                                     SP3 :                                                     SP4 :                                                     SP5 :                                                    
ExUns: 116 ^ 117 ^ 118 ^ 119 ^ 120 ^ 121 ^ 122 ^ 123 ^ 124 ^ 125 ^ 126 ^ 127 ^ 128 ^ 129 ^ 130 ^ 131a · 131b ^ 132a · 132b ^ 133 ^ 134 ^ 135 ^ 136 ^ 137 ^ 138 ^ 139 ^ SP1 :                                                     SP2 :                                                     SP3 :                                                     SP4 :                                                     SP5 :                                                    
ExUns: 140 ^ 141a · 141b ^ 142 ^ 143 ^ 144 ^ 145 ^ 146 ^ 147 ^ 148 ^ 149 ^ 150a · 150b ^ 151a · 151b · 151c ^ 152a · 152b ^ 153a · 153b ^ 154 ^ 155 ^ 156 ^ 157 ^ 158 ^ 159 ^ SP1 :                                                     SP2 :                                                     SP3 :                                                     SP4 :                                                     SP5 :                                                    
ExUns: 160 ^ 161 ^ 162 ^ 163 ^ 164 ^ 165 ^ 166 ^ 167 ^ 168 ^ 169 ^ 170 ^ 171 ^ 172 ^ 173 ^ 174 ^ 175 ^ 176 ^ 177 ^ 178 ^ 179a · SP1 :                                         SP2 :                                         SP3 :                                         SP4 :                                         SP5 :                                        
ECgene alternative splicing isoforms for TTN
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Expression for TTN gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section TTN expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: CAAGTATAAA
About this image TTN expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See TTN Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for TTN SOURCE GeneReport for Unigene cluster: Hs.134602 UniProtKB/Swiss-Prot: TITIN_HUMAN, Q8WZ42 Tissue specificity : Isoforms 3, 7 and 8 are expressed in cardiac muscle. Isoform 4 is expressed in vertebrate skeletalmuscle. Isoform 6 is expressed in skeletal muscle (at protein level) SABiosciences Expression via Pathway-Focused PCR Arrays including TTN : Interferons & Receptors in human mouse rat Oxidative Stress in human mouse rat Nitric Oxide Signaling Pathway in human mouse rat Skeletal Muscle: Myogenesis & Myopathy in human mouse rat Inflammatory Response & Autoimmunity 384HT in human mouse rat
Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for TTNBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat TTN QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat TTN QIAGEN QuantiFast Probe-based Assays in human , mouse , rat TTN In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TTN
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Orthologsfor TTN gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for TTN gene from 5/18 species (see all 18 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
TTN1
titin
74.67(n) 77.68(a)
 
424126 XM_421979.3 XP_421979.3
lizard (Anolis carolinensis)
Reptilia
TTN6
--
76(a)
1 ↔ 1
GL343320.1(716205-944482)
African clawed frog (Xenopus laevis)
Amphibia
480534122
--
76.61(n)
 
48053412
zebrafish (Danio rerio)
Actinopterygii
AY081167.12
--
78.18(n)
 
317731 AY081167.1
worm (Caenorhabditis elegans)
Secernentea
F21C10.73
--
40(a) (best of 3)
 
V(9115384-9124640) --
ENSEMBL Gene Tree for TTN (if available)TreeFam Gene Tree for TTN (if available)
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Paralogsfor TTN gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for TTN gene STK17B 2 DAPK2 2 MYLK2 2 MYLK3 2 STK17A 2 OBSCN 2 DAPK3 2 SPEG 2 MYLK4 2 DAPK1 2 MYLK 2 OBSL1 2 18/52 SIMAP similar genes for TTN using alignment to 13 protein entries: TITIN_HUMAN (see all proteins )
(see all similar genes ):MYLK4 ROBO1 STK17B BRSK2 DAPK3 STK17A CAMK2A DAPK1 PRKD1 MYLK DAPK2 RPS6KA1 PALLD CAMK4 PRKCH DKFZp686I10125 FGFR3 PHKG2
TTN for paralogs About GeneDecksing 1 Pseudogenes.org Pseudogene for TTN PGOHUM00000240442
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Genomic Variantsfor TTN gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 2 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for TTN (179390716 - 179640716 bp, first 250kb of TTN)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 4 variations for TTN 4 CNVs : 32383 3400 4319 68206 Human Gene Mutation Database (HGMD) : TTN Locus Specific Mutation Databases (LSDB): TTN SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing TTN
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Disorders
/ Diseasesfor TTN gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
TTN for disorders About GeneDecksing OMIM gene information: 188840 OMIM disorders : 188840 604145 600334 608807 603689 611705 UniProtKB/Swiss-Prot: TITIN_HUMAN, Q8WZ42
Defects in TTN are the cause of hereditary myopathy with early respiratory failure (HMERF) [MIM:603689]; also known as Edstrom myopathy. HMERF is an autosomal dominant, adult-onset myopathy with early respiratory muscle involvement Defects in TTN are the cause of familial hypertrophic cardiomyopathy type 9 (CMH9) [MIM:613765]. Familial hypertrophic cardiomyopathy is a hereditary heart disorder characterized by ventricular hypertrophy, which is usually asymmetric and often involves the interventricular septum. The symptoms include dyspnea, syncope, collapse, palpitations, and chest pain. They can be readily provoked by exercise. The disorder has inter- and intrafamilial variability ranging from benign to malignant forms with high risk of cardiac failure and sudden cardiac death Defects in TTN are the cause of cardiomyopathy dilated type 1G (CMD1G) [MIM:604145]. Dilated cardiomyopathy is a disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure and arrhythmia. Patients are at risk of premature death Defects in TTN are the cause of tardive tibial muscular dystrophy (TMD) [MIM:600334]; also known as Udd myopathy. TMD is an autosomal dominant, late-onset distal myopathy. Muscle weakness and atrophy are usually confined to the anterior compartment of the lower leg, in particular the tibialis anterior muscle. Clinical symptoms usually occur at age 35-45 years or much later Defects in TTN are the cause of limb-girdle muscular dystrophy type 2J (LGMD2J) [MIM:608807]. LGMD2J is an autosomal recessive degenerative myopathy characterized by progressive weakness of the pelvic and shoulder girdle muscles. Severe disability is observed within 20 years of onset Defects in TTN are the cause of early-onset myopathy with fatal cardiomyopathy (EOMFC) [MIM:611705]. Early-onset myopathies are inherited muscle disorders that manifest typically from birth or infancy with hypotonia, muscle weakness, and delayed motor development. EOMFC is a titinopathy that, in contrast with the previously described examples, involves both heart and skeletal muscle, has a congenital onset, and is purely recessive. This phenotype is due to homozygous out-of-frame TTN deletions, which lead to a total absence of titin's C-terminal end from striated muscles and to secondary CAPN3 depletion 20/49 diseases for TTN (see all 49 ): About MalaCards cardiomyopathy, dilated, 1g cardiomyopathy familial hypertrophic cardiomyopathy hypertrophic cardiomyopathy limb-girdle muscular dystrophy type 2j limb-girdle muscular dystrophy morvan's fibrillary chorea lambert-eaton myasthenic syndrome cardiomyopathy, familial hypertrophic, 9 tibial muscular dystrophy muscular dystrophy rhabdomyosarcoma alveolar soft part sarcoma newborn respiratory distress syndrome hereditary myopathy with early respiratory failure centronuclear myopathy rippling muscle disease myasthenia gravis salih myopathy myopathy 10 diseases from the University of Copenhagen DISEASES database for TTN :Myopathy Thymoma Neuropathy Newborn respiratory distress syndrome Dilated cardiomyopathy Hypertrophic cardiomyopathy Familial hypertrophic cardiomyopathy Hypersensitivity reaction type II disease Meconium aspiration syndrome Diastolic heart failure 10/41 Novoseek disease relationships for TTN gene (see all 41 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
lgmd2a
80.4
15
10987085 (2), 14959561 (1), 9642272 (1), 11294923 (1) (see all 7 )
lgmd2g
78.1
6
14959561 (1), 15316618 (1), 12379311 (1)
myasthenia gravis
75.5
31
9467662 (3), 11766610 (2), 11063835 (2), 9065023 (2) (see all 24 )
thymoma
73.5
59
9451594 (4), 10896269 (4), 11182151 (4), 11706095 (4) (see all 23 )
muscular dystrophy limb-girdle
72.8
4
16115818 (1), 8537379 (1), 18477606 (1), 15043707 (1)
lgmd1a
68.8
2
15316618 (1)
distal myopathies
67.9
5
17337483 (2), 15728284 (1), 16793270 (1), 18948003 (1)
lgmd2h
67.3
4
14959561 (1), 15316618 (1)
muscular dystrophies
64.7
19
11829483 (3), 16115818 (2), 11294923 (1), 8064303 (1) (see all 12 )
lgmd2f
64.6
4
14959561 (1), 15316618 (1)
GeneTests: TTN Familial Hypertrophic Cardiomyopathy Dilated Cardiomyopathy Udd Distal Myopathy Human Genome Epidemiology (HuGE) Navigator: TTN (9 documents) Export disorders for TTN gene to outside databases
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Publicationsfor TTN gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for TTN gene, integrated from 9 sources (see all 477 ): (articles sorted by number of sources associating them with TTN) Utopia : connect your pdf to the dynamic world of online information
Familial dilated cardiomyopathy locus maps to chromosome 2q31. (PubMed id 10051295) 1 , 2 , 3 Siu B.L.... Seidman C.E. (1999) Functional analysis of titin/connectin N2-B mutations found in cardiomyopathy. (PubMed id 16465475) 1 , 2 , 9 Matsumoto Y.... Kimura A. (2005) Tibial muscular dystrophy is a titinopathy caused by mutations in TTN, the gene encoding the giant skeletal-muscle protein titin. (PubMed id 12145747) 1 , 2 , 9 Hackman P.... Udd B. (2002) Mutations of TTN, encoding the giant muscle filament titin, cause familial dilated cardiomyopathy. (PubMed id 11788824) 1 , 2 , 9 Gerull B.... Thierfelder L. (2002) Titin mutations as the molecular basis for dilated cardiomyopathy. (PubMed id 11846417) 1 , 2 , 9 Itoh-Satoh M.... Kimura A. (2002) Series of exon-skipping events in the elastic spring region of titin as the structural basis for myofibrillar elastic diversity. (PubMed id 10850961) 1 , 2 , 9 Freiburg A.... Labeit S. (2000) Association of the chaperone alphaB-crystallin with titin in heart muscle. (PubMed id 14676215) 1 , 2 , 9 Bullard B.... Linke W.A. (2004) Structural evidence for a possible role of reversible disulphide bridge formation in the elasticity of the muscle protein titin. (PubMed id 11525170) 1 , 2 , 9 Mayans O.... Wilmanns M. (2001) The three-dimensional structure of a type I module from titin: a prototype of intracellular fibronectin type III domains. (PubMed id 9782056) 1 , 2 , 9 Goll C.M.... Nilges M. (1998) Titins, giant proteins in charge of muscle ultrastructure and elasticity. (PubMed id 7569978) 1 , 2 , 9 Labeit S. and Kolmerer B. (1995)
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External Searches for TTN gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing TTN gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing TTN gene
(According to HUGE )
About This Section --
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Specialized Databases showing TTN gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for TTN Pharmacogenomics, SNPs, Pathways ATLAS Chromosomes in Cancer entry for TTN Genetics and Cytogenetics in Oncology and Haematology GeneReviews http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/TTN Wikipedia http://en.wikipedia.org/wiki/Titin
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About This Section Patent Information for TTN gene: Search GeneIP for patents involving TTN GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor TTN gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for TTN OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for TTN OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for TTN Browse OriGene Protein Over-expression Lysates Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for TTN OriGene 3'-UTR Clone for TTN OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for TTN OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for TTN Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for TTN OriGene Custom Protein Services for TTN OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat TTN QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing TTN QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TTN QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat TTN QIAGEN QuantiFast Probe-based Assays in human , mouse , rat TTN QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat TTN
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TTN Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TTN
ThermoFisher Antibodies for TTN
Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat TTN
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