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Aliases for TTLL11-IT1 Gene

Subcategory (RNA class) for TTLL11-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTLL11-IT1 Gene

  • TTLL11 Intronic Transcript 1 2 3 5
  • TTLL11 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • Chromosome 9 Open Reading Frame 148 2
  • C9orf148 3

External Ids for TTLL11-IT1 Gene

Previous HGNC Symbols for TTLL11-IT1 Gene

  • C9orf148

Previous GeneCards Identifiers for TTLL11-IT1 Gene

  • GC09M124650

Summaries for TTLL11-IT1 Gene

GeneCards Summary for TTLL11-IT1 Gene

TTLL11-IT1 (TTLL11 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTLL11-IT1 Gene

Genomics for TTLL11-IT1 Gene

Regulatory Elements for TTLL11-IT1 Gene

Enhancers for TTLL11-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F122203 0.4 ENCODE 4.8 -240.6 -240609 1.0 LEF1 DDX20 ZNF175 BACH1 CEBPG IRF9 SCRT2 ZNF584 TRIM24 EGR2 LHX6 TTLL11-IT1 GC09P122163
GH09F121962 1 Ensembl ENCODE 0.8 +0.2 179 2.7 ELF3 ARID4B THRB YY1 RARA CREM ZNF362 PPARG NR2F2 NFIL3 ENSG00000261534 TTLL11-IT1
GH09F121972 1.3 Ensembl ENCODE 0.4 -9.4 -9396 2.2 ELF3 TBP MLX ARID4B ZNF48 RFX5 FOS CREM THAP11 MIXL1 ENSG00000261094 ZBTB26 ENSG00000261534 TTLL11-IT1 TTLL11
GH09F121976 1.2 FANTOM5 ENCODE 0.4 -13.3 -13296 0.3 ATF1 ZMYM3 ATF2 JUND ATF3 RCOR2 NR2F6 FOS PRDM1 CREM TTLL11-IT1 TTLL11
GH09F121975 0.4 ENCODE 0.4 -12.3 -12341 1.6 ELF3 ATF1 ZFP64 ARID4B YY1 SCRT2 FOS CREM MIXL1 KAT8 ENSG00000261534 TTLL11-IT1 TTLL11
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TTLL11-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TTLL11-IT1 Gene

Chromosome:
9
Start:
121,884,611 bp from pter
End:
121,963,719 bp from pter
Size:
79,109 bases
Orientation:
Minus strand

Genomic View for TTLL11-IT1 Gene

Genes around TTLL11-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTLL11-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTLL11-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for TTLL11-IT1 Gene

Proteins for TTLL11-IT1 Gene

Post-translational modifications for TTLL11-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTLL11-IT1 Gene

Domains & Families for TTLL11-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTLL11-IT1 Gene

Function for TTLL11-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTLL11-IT1 Gene

Localization for TTLL11-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTLL11-IT1 Gene

Pathways & Interactions for TTLL11-IT1 Gene

SuperPathways for TTLL11-IT1 Gene

No Data Available

Interacting Proteins for TTLL11-IT1 Gene

Gene Ontology (GO) - Biological Process for TTLL11-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTLL11-IT1 Gene

Transcripts for TTLL11-IT1 Gene

mRNA/cDNA for TTLL11-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TTLL11-IT1 Gene

No ASD Table

Relevant External Links for TTLL11-IT1 Gene

GeneLoc Exon Structure for
TTLL11-IT1
ECgene alternative splicing isoforms for
TTLL11-IT1

Expression for TTLL11-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TTLL11-IT1 Gene

genes like me logo Genes that share expression patterns with TTLL11-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TTLL11-IT1 Gene

Orthologs for TTLL11-IT1 Gene

Evolution for TTLL11-IT1 Gene

ENSEMBL:
Gene Tree for TTLL11-IT1 (if available)
TreeFam:
Gene Tree for TTLL11-IT1 (if available)

No data available for Orthologs for TTLL11-IT1 Gene

Paralogs for TTLL11-IT1 Gene

No data available for Paralogs for TTLL11-IT1 Gene

Variants for TTLL11-IT1 Gene

Relevant External Links for TTLL11-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TTLL11-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TTLL11-IT1 Gene

Disorders for TTLL11-IT1 Gene

Relevant External Links for TTLL11-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TTLL11-IT1

No disorders were found for TTLL11-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTLL11-IT1 Gene

Publications for TTLL11-IT1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for TTLL11-IT1 Gene

Sources for TTLL11-IT1 Gene

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