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Aliases for TTLL11-IT1 Gene

Subcategory (RNA class) for TTLL11-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTLL11-IT1 Gene

  • TTLL11 Intronic Transcript 1 2 3 5
  • TTLL11 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • Chromosome 9 Open Reading Frame 148 2
  • C9orf148 3

External Ids for TTLL11-IT1 Gene

Previous HGNC Symbols for TTLL11-IT1 Gene

  • C9orf148

Previous GeneCards Identifiers for TTLL11-IT1 Gene

  • GC09M124650

Summaries for TTLL11-IT1 Gene

GeneCards Summary for TTLL11-IT1 Gene

TTLL11-IT1 (TTLL11 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TTLL11-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTLL11-IT1 Gene

Genomics for TTLL11-IT1 Gene

Regulatory Elements for TTLL11-IT1 Gene

Enhancers for TTLL11-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H122203 0.4 ENCODE 4.8 -240.6 -240609 0 EGR2 LHX6 TTLL11-IT1 GC09P122163
GH09H121962 0.8 Ensembl ENCODE 0.7 0.0 -26 2 JUND POLR2A JUN PRDM10 MAFK ENSG00000261534 TTLL11-IT1 TTLL11
GH09H121976 1 FANTOM5 ENCODE 0.4 -13.3 -13296 0 ATF1 ZBTB21 ATF2 JUND ZNF629 TARDBP CREB1 FOS CREM PRDM1 TTLL11-IT1 TTLL11
GH09H121972 0.9 Ensembl ENCODE 0.4 -9.4 -9396 2 TBP STAT1 ZNF146 MXI1 RFX1 JUN RFX5 E2F1 GATA3 JUND ENSG00000261534 TTLL11-IT1 TTLL11
GH09H121975 0.9 ENCODE 0.4 -12.3 -12341 1 ELF3 ATF1 FOXA2 ZFP64 ARID4B YY1 FOS CREM MIXL1 KAT8 ENSG00000261534 TTLL11-IT1 TTLL11
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TTLL11-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TTLL11-IT1 Gene

Chromosome:
9
Start:
121,884,611 bp from pter
End:
121,963,719 bp from pter
Size:
79,109 bases
Orientation:
Minus strand

Genomic View for TTLL11-IT1 Gene

Genes around TTLL11-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTLL11-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTLL11-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for TTLL11-IT1 Gene

Proteins for TTLL11-IT1 Gene

Post-translational modifications for TTLL11-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTLL11-IT1 Gene

Domains & Families for TTLL11-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTLL11-IT1 Gene

Function for TTLL11-IT1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TTLL11-IT1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTLL11-IT1 Gene

Localization for TTLL11-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TTLL11-IT1 Gene

Pathways & Interactions for TTLL11-IT1 Gene

SuperPathways for TTLL11-IT1 Gene

No Data Available

Interacting Proteins for TTLL11-IT1 Gene

Gene Ontology (GO) - Biological Process for TTLL11-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTLL11-IT1 Gene

Drugs & Compounds for TTLL11-IT1 Gene

No Compound Related Data Available

Transcripts for TTLL11-IT1 Gene

mRNA/cDNA for TTLL11-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TTLL11-IT1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TTLL11-IT1 Gene

No ASD Table

Relevant External Links for TTLL11-IT1 Gene

GeneLoc Exon Structure for
TTLL11-IT1
ECgene alternative splicing isoforms for
TTLL11-IT1

Expression for TTLL11-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TTLL11-IT1 Gene

genes like me logo Genes that share expression patterns with TTLL11-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TTLL11-IT1 Gene

Orthologs for TTLL11-IT1 Gene

Evolution for TTLL11-IT1 Gene

ENSEMBL:
Gene Tree for TTLL11-IT1 (if available)
TreeFam:
Gene Tree for TTLL11-IT1 (if available)

No data available for Orthologs for TTLL11-IT1 Gene

Paralogs for TTLL11-IT1 Gene

No data available for Paralogs for TTLL11-IT1 Gene

Variants for TTLL11-IT1 Gene

Relevant External Links for TTLL11-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TTLL11-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TTLL11-IT1 Gene

Disorders for TTLL11-IT1 Gene

Relevant External Links for TTLL11-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TTLL11-IT1

No disorders were found for TTLL11-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTLL11-IT1 Gene

Publications for TTLL11-IT1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for TTLL11-IT1 Gene

Sources for TTLL11-IT1 Gene

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