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Aliases for TTLL10-AS1 Gene

Subcategory (RNA class) for TTLL10-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTLL10-AS1 Gene

  • TTLL10 Antisense RNA 1 2 3 5
  • TTLL10 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TTLL10-AS1 Gene

Previous GeneCards Identifiers for TTLL10-AS1 Gene

  • GC01M001110

Summaries for TTLL10-AS1 Gene

GeneCards Summary for TTLL10-AS1 Gene

TTLL10-AS1 (TTLL10 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TTLL10-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTLL10-AS1 Gene

Genomics for TTLL10-AS1 Gene

GeneHancer (GH) Regulatory Elements for TTLL10-AS1 Gene

Promoters and enhancers for TTLL10-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I001179 Promoter 0.8 EPDnew 550.8 -0.1 -114 0.1 RING1 BCL11A CREB1 ATF7 ATF2 BCL11B TTLL10-AS1 TTLL10 LOC105378580 ATAD3B INTS11 CICP3 LINC01786 LINC00115 ENSG00000240731 ENSG00000272455
GH01I001210 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 12.9 -34.1 -34062 7.2 HDGF GLIS2 SCRT2 IKZF2 RUNX3 EGR2 REST ELF1 ZNF623 MYNN TNFRSF4 B3GALT6 TTLL10-AS1 TTLL10 UBE2J2 LINC01786 ATAD3B ANKRD65 SDF4 AURKAIP1
GH01I001156 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 12.9 +21.1 21120 4.4 HDGF ATF1 ARID4B ZNF48 POLR2B ZNF766 ATF7 SP5 NCOA1 ZHX2 GC01P001160 LINC01786 TTLL10 ATAD3B LOC105378580 TTLL10-AS1 INTS11 CICP3 UBE2J2 LINC00115
GH01I001127 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 12.9 +50.3 50313 4 FOXA2 ARID4B DMAP1 ZNF48 RAD21 YY1 CREM THAP11 EGR2 MCM3 GC01M001125 SDF4 TTLL10 MXRA8 TTLL10-AS1 ENSG00000230092 B3GALT6 C1QTNF12 UBE2J2 LOC100288379
GH01I001131 Enhancer 1.3 Ensembl ENCODE dbSUPER 12.9 +44.5 44475 6.5 ELF3 PKNOX1 NFRKB BMI1 RAD21 EGR1 SCRT2 ATF7 IKZF2 RUNX3 LINC01342 TTLL10 TTLL10-AS1 B3GALT6 SDF4 C1QTNF12 UBE2J2 C1orf159 GC01M001125 GC01M001138
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TTLL10-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TTLL10-AS1 Gene

Genomic Locations for TTLL10-AS1 Gene
chr1:1,173,055-1,179,555
(GRCh38/hg38)
Size:
6,501 bases
Orientation:
Minus strand
chr1:1,108,436-1,114,935
(GRCh37/hg19)

Genomic View for TTLL10-AS1 Gene

Genes around TTLL10-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTLL10-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTLL10-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTLL10-AS1 Gene

Proteins for TTLL10-AS1 Gene

Post-translational modifications for TTLL10-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTLL10-AS1 Gene

Domains & Families for TTLL10-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTLL10-AS1 Gene

Function for TTLL10-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTLL10-AS1 Gene

Localization for TTLL10-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TTLL10-AS1 Gene

Pathways & Interactions for TTLL10-AS1 Gene

SuperPathways for TTLL10-AS1 Gene

No Data Available

Interacting Proteins for TTLL10-AS1 Gene

Gene Ontology (GO) - Biological Process for TTLL10-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTLL10-AS1 Gene

Drugs & Compounds for TTLL10-AS1 Gene

No Compound Related Data Available

Transcripts for TTLL10-AS1 Gene

mRNA/cDNA for TTLL10-AS1 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TTLL10-AS1 Gene

TTLL10 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TTLL10-AS1 Gene

No ASD Table

Relevant External Links for TTLL10-AS1 Gene

GeneLoc Exon Structure for
TTLL10-AS1
ECgene alternative splicing isoforms for
TTLL10-AS1

Expression for TTLL10-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TTLL10-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TTLL10-AS1 Gene

This gene is overexpressed in Testis (x18.9), Fallopian Tube (x5.9), and Cervix - Endocervix (x4.2).

SOURCE GeneReport for Unigene cluster for TTLL10-AS1 Gene:

Hs.672618
genes like me logo Genes that share expression patterns with TTLL10-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TTLL10-AS1 Gene

Orthologs for TTLL10-AS1 Gene

Evolution for TTLL10-AS1 Gene

ENSEMBL:
Gene Tree for TTLL10-AS1 (if available)
TreeFam:
Gene Tree for TTLL10-AS1 (if available)

No data available for Orthologs for TTLL10-AS1 Gene

Paralogs for TTLL10-AS1 Gene

No data available for Paralogs for TTLL10-AS1 Gene

Variants for TTLL10-AS1 Gene

Sequence variations from dbSNP and Humsavar for TTLL10-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000034101 -- 1,178,288(-) A/G intron_variant, non_coding_transcript_variant
rs1000132549 -- 1,179,978(-) C/T upstream_transcript_variant
rs1000321863 -- 1,177,286(-) G/A intron_variant
rs1000491954 -- 1,175,302(-) G/A non_coding_transcript_variant
rs1000713097 -- 1,174,585(-) C/T genic_downstream_transcript_variant, non_coding_transcript_variant

Additional Variant Information for TTLL10-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TTLL10-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TTLL10-AS1 Gene

Disorders for TTLL10-AS1 Gene

Additional Disease Information for TTLL10-AS1

No disorders were found for TTLL10-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTLL10-AS1 Gene

Publications for TTLL10-AS1 Gene

No publications were found for TTLL10-AS1 Gene.

Products for TTLL10-AS1 Gene

Sources for TTLL10-AS1 Gene

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