Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TTLL10-AS1 Gene

Subcategory (RNA class) for TTLL10-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TTLL10-AS1 Gene

  • TTLL10 Antisense RNA 1 2 3 5
  • TTLL10 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TTLL10-AS1 Gene

Previous GeneCards Identifiers for TTLL10-AS1 Gene

  • GC01M001110

Summaries for TTLL10-AS1 Gene

GeneCards Summary for TTLL10-AS1 Gene

TTLL10-AS1 (TTLL10 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTLL10-AS1 Gene

Genomics for TTLL10-AS1 Gene

Regulatory Elements for TTLL10-AS1 Gene

Enhancers for TTLL10-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G001127 2 FANTOM5 Ensembl ENCODE dbSUPER 12.9 +50.3 50314 4.0 HDGF FOXA2 PKNOX1 CREB3L1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 TTLL10 TTLL10-AS1 SDF4 B3GALT6 C1QTNF12 UBE2J2 C1orf159 AGRN VWA1 GC01M001125
GH01G001156 1.8 FANTOM5 Ensembl ENCODE dbSUPER 12.9 +21.1 21121 4.4 HDGF ATF1 CREB3L1 ARID4B ZNF48 ZNF766 KDM4B SP5 ZHX2 ZNF592 LINC01786 TTLL10 LOC100287934 TTLL10-AS1 CICP3 UBE2J2 LINC00115 ENSG00000240731 ENSG00000272455 SLC35E2
GH01G001131 1.6 Ensembl ENCODE dbSUPER 12.9 +44.5 44475 6.5 HDGF PKNOX1 CREB3L1 AGO1 ARID4B SIN3A ZNF143 ZNF207 FOS KLF13 TTLL10 TTLL10-AS1 B3GALT6 SDF4 C1QTNF12 UBE2J2 C1orf159 LINC01342 GC01M001125
GH01G001210 1.4 Ensembl ENCODE dbSUPER 12.9 -34.1 -34063 7.2 HDGF PKNOX1 AGO1 GLIS2 FOS REST ZNF623 ZNF585B MYNN GLIS1 B3GALT6 TTLL10-AS1 TTLL10 LINC01786 UBE2J2 ATAD3B ANKRD65 SDF4 AURKAIP1 TNFRSF4
GH01G001219 0.9 ENCODE dbSUPER 12.9 -40.4 -40397 0.9 TCF12 GLIS2 NCOR1 ZNF26 TAL1 KLF17 ZBTB33 RBFOX2 B3GALT6 CCNL2 TTLL10-AS1 TTLL10 UBE2J2 LINC01786 ENSG00000230092 LOC100288379 AURKAIP1 SLC35E2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TTLL10-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TTLL10-AS1 Gene

Chromosome:
1
Start:
1,173,055 bp from pter
End:
1,179,555 bp from pter
Size:
6,501 bases
Orientation:
Minus strand

Genomic View for TTLL10-AS1 Gene

Genes around TTLL10-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTLL10-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTLL10-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTLL10-AS1 Gene

Proteins for TTLL10-AS1 Gene

Post-translational modifications for TTLL10-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTLL10-AS1 Gene

Domains & Families for TTLL10-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTLL10-AS1 Gene

Function for TTLL10-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTLL10-AS1 Gene

Localization for TTLL10-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTLL10-AS1 Gene

Pathways & Interactions for TTLL10-AS1 Gene

SuperPathways for TTLL10-AS1 Gene

No Data Available

Interacting Proteins for TTLL10-AS1 Gene

Gene Ontology (GO) - Biological Process for TTLL10-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTLL10-AS1 Gene

Drugs & Compounds for TTLL10-AS1 Gene

No Compound Related Data Available

Transcripts for TTLL10-AS1 Gene

mRNA/cDNA for TTLL10-AS1 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TTLL10-AS1 Gene

TTLL10 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TTLL10-AS1 Gene

No ASD Table

Relevant External Links for TTLL10-AS1 Gene

GeneLoc Exon Structure for
TTLL10-AS1
ECgene alternative splicing isoforms for
TTLL10-AS1

Expression for TTLL10-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TTLL10-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TTLL10-AS1 Gene

This gene is overexpressed in Testis (x18.9), Fallopian Tube (x5.9), and Cervix - Endocervix (x4.2).

SOURCE GeneReport for Unigene cluster for TTLL10-AS1 Gene:

Hs.672618
genes like me logo Genes that share expression patterns with TTLL10-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TTLL10-AS1 Gene

Orthologs for TTLL10-AS1 Gene

Evolution for TTLL10-AS1 Gene

ENSEMBL:
Gene Tree for TTLL10-AS1 (if available)
TreeFam:
Gene Tree for TTLL10-AS1 (if available)

No data available for Orthologs for TTLL10-AS1 Gene

Paralogs for TTLL10-AS1 Gene

No data available for Paralogs for TTLL10-AS1 Gene

Variants for TTLL10-AS1 Gene

Sequence variations from dbSNP and Humsavar for TTLL10-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000034101 -- 1,178,288(+) GGCAC(A/G)GTGGC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1000132549 -- 1,179,978(+) ATGTC(C/T)GGGCT intron-variant, upstream-variant-2KB
rs1000321863 -- 1,177,286(+) TGTGC(A/G)TGTGT intron-variant, upstream-variant-2KB
rs1000491954 -- 1,175,302(+) GAGAC(A/G)GAGGC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1000713097 -- 1,174,585(+) CCGTC(C/T)TCCAC intron-variant, nc-transcript-variant, upstream-variant-2KB

Relevant External Links for TTLL10-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TTLL10-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TTLL10-AS1 Gene

Disorders for TTLL10-AS1 Gene

Relevant External Links for TTLL10-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TTLL10-AS1

No disorders were found for TTLL10-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TTLL10-AS1 Gene

Publications for TTLL10-AS1 Gene

No publications were found for TTLL10-AS1 Gene.

Products for TTLL10-AS1 Gene

Sources for TTLL10-AS1 Gene

Content
Loading form....