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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

TTI1 Gene

protein-coding   GIFtS: 48
GCID: GC20M036612

TELO2 interacting protein 1

(Previous names: KIAA0406, Tel2 interacting protein 1 homolog (S. pombe)...)
(Previous symbol: KIAA0406)
  Search for TTI1
in our new
 Human Malady Compendium 
Biological research products
for TTI1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
TELO2 Interacting Protein 11 2     Tel2 Interacting Protein 1 Homolog2
KIAA04061 2 3     TEL2-Interacting Protein 1 Homolog2
Smg-101     TELO2-Interacting Protein 1 Homolog2
Tel2 Interacting Protein 1 Homolog (S. Pombe)1     SMG103
Smg-10 Homolog, Nonsense Mediated MRNA Decay Factor2     Protein SMG103
Tel Two Interacting Protein 12     

External Ids:    HGNC: 290291   Entrez Gene: 96752   Ensembl: ENSG000001014077   OMIM: 6144255   UniProtKB: O431563   

Export aliases for TTI1 gene to outside databases

Previous GC identifer: GC20M033347


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: TTI1_HUMAN, O43156
Function: Regulator of the DNA damage response (DDR). Part of the TTT complex that is required to stabilize protein
levels of the phosphatidylinositol 3-kinase-related protein kinase (PIKK) family proteins. The TTT complex is involved
in the cellular resistance to DNA damage stresses, like ionizing radiation (IR), ultraviolet (UV) and mitomycin C
(MMC). Together with the TTT complex and HSP90 may participate in the proper folding of newly synthesized PIKKs.
Promotes assembly, stabilizes and maintains the activity of mTORC1 and mTORC2 complexes, which regulate cell growth
and survival in response to nutrient and hormonal signals




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000020.10  NC_018931.1  NT_011362.10  
Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for TTI1
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidTTI1 promoter sequence
   Search SABiosciences Chromatin IP Primers for TTI1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TTI1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 20q11.23   Ensembl cytogenetic band:  20q11.23   HGNC cytogenetic band: 20q11.23

TTI1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TTI1 gene location

GeneLoc information about chromosome 20         GeneLoc Exon Structure

GeneLoc location for GC20M036612:  view genomic region     (about GC identifiers)

Start:
36,611,409 bp from pter      End:
36,661,870 bp from pter
Size:
50,462 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: TTI1_HUMAN, O43156 (See protein sequence)
Recommended Name: TELO2-interacting protein 1 homolog  
Size: 1089 amino acids; 122069 Da
Subunit: Component of the TTT complex composed of TELO2, TTI1 and TTI2. Interacts with ATM, ATR, MTOR, PRKDC, SMG1,
TELO2, TRRAP AND TTI2. Component of the mTORC1 and mTORC2 complexes
Subcellular location: Cytoplasm
Sequence caution: Sequence=BAA23702.2; Type=Erroneous initiation; Note=Translation N-terminally shortened;
Secondary accessions: Q5JX67 Q96A38 Q9BR47 Q9H4K0

Explore the universe of human proteins at neXtProt for TTI1: NX_O43156

Post-translational modifications:

  • Phosphorylated at Ser-828 by CK2 following growth factor deprivation, leading to its subsequent ubiquitination by the
  • SCF(FBXO9) complex. Phosphorylation by CK2 only takes place when TELO2 is bound to mTORC1, not mTORC2; leading to
    selective ubiquitination of mTORC1-associated protein1
  • Ubiquitinated by the SCF(FBXO9) complex following phosphorylation by CK2 in response to growth factor deprivation,
  • leading to its degradation by the proteasome. Only mTORC1-associated protein is ubiquitinated and degraded, leading to
    selective inactivation of mTORC1 to restrain cell growth and protein translation, while mTORC2 is activated due to the
    relief of feedback inhibition by mTORC11
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O43156

  • TTI1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_055472.1  
    ENSEMBL proteins: 
     ENSP00000362547   ENSP00000362546   ENSP00000407270  

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    Uscn Proteins for TTI1

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm IDA--
    GO:0031931TORC1 complex IDA--
    GO:0031932TORC2 complex IDA--


    TTI1 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TTI1 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR011989 ARM-like
     IPR016024 ARM-type_fold
     IPR016441 UCP005250

    Graphical View of Domain Structure for InterPro Entry O43156

    ProtoNet protein and cluster: O43156

    1 Blocks protein family: IPB000357 HEAT repeat

    UniProtKB/Swiss-Prot: TTI1_HUMAN, O43156
    Similarity: Belongs to the tti1 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: TTI1_HUMAN, O43156
    Function: Regulator of the DNA damage response (DDR). Part of the TTT complex that is required to stabilize protein
    levels of the phosphatidylinositol 3-kinase-related protein kinase (PIKK) family proteins. The TTT complex is involved
    in the cellular resistance to DNA damage stresses, like ionizing radiation (IR), ultraviolet (UV) and mitomycin C
    (MMC). Together with the TTT complex and HSP90 may participate in the proper folding of newly synthesized PIKKs.
    Promotes assembly, stabilizes and maintains the activity of mTORC1 and mTORC2 complexes, which regulate cell growth
    and survival in response to nutrient and hormonal signals

    miRNA
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    SwitchGear 3'UTR luciferase reporter plasmidTTI1 3' UTR sequence
    Inhib. RNA
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    Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding IPI--


    TTI1 for ontologies           About GeneDecksing



    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for TTI1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 19)

    5/19 Interacting proteins for TTI1 (O431561, 3 ENSP000003625464) via UniProtKB, MINT, STRING, and/or I2D (see all 19)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    TELO2Q9Y4R81, 3, ENSP000002623194EBI-1055680,EBI-1047721 I2D: score=1 STRING: ENSP00000262319
    ATMQ133151, 3, ENSP000002786164EBI-1055680,EBI-1059333 I2D: score=1 STRING: ENSP00000278616
    ATRQ135351, 3, ENSP000003437414EBI-1055680,EBI-968983 I2D: score=1 STRING: ENSP00000343741
    PRKDCP785273, ENSP000003134204I2D: score=1 STRING: ENSP00000313420
    PTP4A3O753653, ENSP000003322744I2D: score=1 STRING: ENSP00000332274
    About this table

    Gene Ontology (GO): 1 biological process term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0032006regulation of TOR signaling cascade IMP--


    TTI1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for TTI1
    Search CenterWatch for drugs/clinical trials and news about TTI1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for TTI1 gene: 
    NM_014657.1  

    Unigene Cluster for TTI1:

    TELO2 interacting protein 1
    Hs.655481  [show with all ESTs]
    Unigene Representative Sequence: BC013121
    5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000373448(uc002xhl.3) ENST00000373447(uc002xhm.3) ENST00000473288
    ENST00000487362 ENST00000449821

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    hsa-miR-205 hsa-miR-576-5p hsa-miR-4263 hsa-miR-369-5p hsa-miR-147
    SwitchGear 3'UTR luciferase reporter plasmidTTI1 3' UTR sequence
    Inhib. RNA
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    Additional cDNA sequence: 

    AB007866.2 AK095451.1 AK308164.1 BC013121.1 BC013755.1 BC107778.1 BC131759.1 

    8 DOTS entries:

    DT.101961860  DT.100694288  DT.212821  DT.100027212  DT.91687949  DT.120818872  DT.100684749  DT.95217085 

    24/140 AceView cDNA sequences (see all 140):

    CR607862 BG774398 AX748262 NM_014657 AA346191 CR596340 CB164765 AA046746 
    BU539305 AL559273 BU172334 AU132144 BQ064449 BU684997 AA355808 BX279765 
    AW294732 BM464983 BE883532 BC013755 CB125949 BX482228 BU170769 BC013121 

    GeneLoc Exon Structure

    5/7 Alternative Splicing Database (ASD) splice patterns (SP) for TTI1 (see all 7)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8a · 8b · 8c · 8d ^ 9 ^ 10 ^ 11 ^ 12
    SP1:                                                              -                 -                           
    SP2:              -     -     -     -     -     -                 -                 -                           
    SP3:                          -                                                                                 
    SP4:                                                                                                            
    SP5:              -                                                                                             


    ECgene alternative splicing isoforms for TTI1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TTI1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GACGTGATGG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See TTI1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for TTI1

    SOURCE GeneReport for Unigene cluster: Hs.655481

    UniProtKB/Swiss-Prot: TTI1_HUMAN, O43156
    Tissue specificity: Widely expressed

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    In Situ
    Assay Products:
     

     
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for TTI1 gene from 7/21 species (see all 21)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Tti11 , 5 TELO2 interacting protein 11, 5 85.49(n)1
    85.42(a)1
      2 (78.68 cM)5
    754251  NM_029282.11  NP_083558.11 
     1579818035 
    chicken
    (Gallus gallus)
    Aves TTI11 Tel2 interacting protein 1 homolog (S. pombe) 65.33(n)
    62.1(a)
      419296  XM_001234098.2  XP_001234099.1 
    lizard
    (Anolis carolinensis)
    Reptilia TTI16
    --
    62(a)
    1 ↔ 1
    GL343572.1(81680-117765)
    zebrafish
    (Danio rerio)
    Actinopterygii tti11 TELO2 interacting protein 1 57.26(n)
    55.84(a)
      570077  XM_693510.5  XP_698602.3 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG169081 CG16908 39.22(n)
    23.41(a)
      41189  NM_141680.1  NP_649937.1 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT1G791906
    uncharacterized protein
    16(a)
    1 ↔ 1
    1(29788639-29794175)
    rice
    (Oryza sativa)
    Liliopsida --
    expressed protein
    15(a)
    1 ↔ 1
    10(22852622-22861152)


    ENSEMBL Gene Tree for TTI1 (if available)
    TreeFam Gene Tree for TTI1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/81 NCBI SNPs in TTI1 are shown (see all 81    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 20 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs732984341,2
    C,--33396148(+) GGAAAG/AATGAT 1 -- int12Minor allele frequency- A:0.03WA 120
    rs60974251,2
    H,--33396189(+) GACTAG/AATACT 1 -- int14Minor allele frequency- A:0.00NS EA 420
    rs60974261,2
    H--33396210(+) TTTTAG/AGTTAC 1 -- int14Minor allele frequency- A:0.00NS EA 420
    rs752734881,2
    --33396559(+) AGAACG/TTCTCC 1 -- int11Minor allele frequency- T:0.01WA 118
    rs60137011,2
    H--33397271(+) GGCTGA/TGTAGG 1 -- int14Minor allele frequency- T:0.00NS EA 416
    rs739055291,2
    C,--33397283(+) GCTCAC/TCAGGT 1 -- int11Minor allele frequency- T:0.50WA 2
    rs169870851,2
    C,F,H,--33397324(+) ACGAGC/AGCCAG 1 -- int114Minor allele frequency- A:0.09NA NS EA WA 1354
    rs730984161,2
    --33397791(+) AAGTGC/GTCTGC 1 -- us2k10--------
    rs73455531,2
    H--33397804(+) GAGGTT/ACAGAG 1 -- us2k14Minor allele frequency- A:0.00NS EA 420
    rs8815561,2
    C,F,A,H,--33398022(+) TCCCGC/TAGCCT 1 -- us2k126Minor allele frequency- T:0.21NA PA MN NS EA CSA WA 2921

    HapMap Linkage Disequilibrium report for TTI1 (36611409 - 36661870 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for TTI1: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing TTI1
    DNA2.0 Custom Variant and Variant Library Synthesis for TTI1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TTI1 for disorders           About MalaCards

    TTI1 for disorders           About GeneDecksing

    OMIM gene information: 614425    OMIM disorders: --

    Human Genome Epidemiology (HuGE) Navigator: TTI1 (1 document)

    Export disorders for TTI1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for TTI1 gene, integrated from 9 sources (see all 19):
    (articles sorted by number of sources associating them with TTI1)
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    1. Tti1 and Tel2 are critical factors in mammalian targe t of rapamycin complex assembly. (PubMed id 20427287)1, 2, 3 Kaizuka T....Mizushima N. (2010)
    2. AAA+ proteins RUVBL1 and RUVBL2 coordinate PIKK activ ity and function in nonsense-mediated mRNA decay. (PubMed id 20371770)1, 2, 3 Izumi N....Ohno S. (2010)
    3. Prediction of the coding sequences of unidentified human genes. VIII. 78 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 9455477)1, 2, 3 Ishikawa K....Ohara O. (1997)
    4. Tel2 structure and function in the Hsp90-dependent ma turation of mTOR and ATR complexes. (PubMed id 20801936)1, 2 Takai H....Pavletich N.P. (2010)
    5. A genetic screen identifies the Triple T complex requ ired for DNA damage signaling and ATM and ATR stability. (PubMed id 20810650)1, 2 Hurov K.E....Elledge S.J. (2010)
    6. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)1, 2 Olsen J.V....Mann M. (2006)
    7. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    8. The DNA sequence and comparative analysis of human chromosome 20. (PubMed id 11780052)1, 2 Deloukas P....Rogers J. (2001)
    9. SCF(Fbxo9) and CK2 direct the cellular response to growth factor withdrawal via Tel2/Tti1 degradation and promote survival in multiple myeloma. (PubMed id 23263282)2 Fernandez-Saiz V....Bassermann F. (2013)
    10. A high-throughput approach for measuring temporal chan ges in the interactome. (PubMed id 22863883)1 Kristensen A.R....Foster L.J. (2012)

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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 9675 HGNC: 29029 AceView: KIAA0406 Ensembl:ENSG00000101407 euGenes: HUgn9675
    ECgene: TTI1 H-InvDB: TTI1

    (According to HUGE)
    About This Section
    HUGE: KIAA0406

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for TTI1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for TTI1 gene:
    Search GeneIP for patents involving TTI1

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