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Aliases for TTC39DP Gene

Aliases for TTC39DP Gene

  • Tetratricopeptide Repeat Domain 39D, Pseudogene 2 3

External Ids for TTC39DP Gene

Previous GeneCards Identifiers for TTC39DP Gene

  • GC02P038980
  • GC02P038729
  • GC02P038991

Summaries for TTC39DP Gene

GeneCards Summary for TTC39DP Gene

TTC39DP (Tetratricopeptide Repeat Domain 39D, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTC39DP Gene

Genomics for TTC39DP Gene

Genomic Location for TTC39DP Gene

Start:
38,763,534 bp from pter
End:
38,765,221 bp from pter
Size:
1,688 bases
Orientation:
Plus strand

Genomic View for TTC39DP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TTC39DP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTC39DP Gene

No data available for Regulatory Elements for TTC39DP Gene

Proteins for TTC39DP Gene

Post-translational modifications for TTC39DP Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTC39DP Gene

Domains for TTC39DP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTC39DP Gene

Function for TTC39DP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TTC39DP Gene

Localization for TTC39DP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTC39DP Gene

Pathways for TTC39DP Gene

SuperPathways for TTC39DP Gene

No Data Available

Interacting Proteins for TTC39DP Gene

Gene Ontology (GO) - Biological Process for TTC39DP Gene

None

No data available for Pathways by source for TTC39DP Gene

Transcripts for TTC39DP Gene

mRNA/cDNA for TTC39DP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TTC39DP Gene

No ASD Table

Relevant External Links for TTC39DP Gene

GeneLoc Exon Structure for
TTC39DP
ECgene alternative splicing isoforms for
TTC39DP

Expression for TTC39DP Gene

mRNA expression in normal human tissues for TTC39DP Gene

mRNA differential expression in normal tissues according to GTEx for TTC39DP Gene

This gene is overexpressed in Testis (23.4).
genes like me logo Genes that share expressions with TTC39DP: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for TTC39DP Gene

Orthologs for TTC39DP Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for TTC39DP Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Ttc39d 16
Species with no ortholog for TTC39DP:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TTC39DP Gene

ENSEMBL:
Gene Tree for TTC39DP (if available)
TreeFam:
Gene Tree for TTC39DP (if available)

Paralogs for TTC39DP Gene

No data available for Paralogs for TTC39DP Gene

Variants for TTC39DP Gene

Relevant External Links for TTC39DP Gene

HapMap Linkage Disequilibrium report
TTC39DP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TTC39DP Gene

Disorders for TTC39DP Gene

No disorders were found for TTC39DP Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TTC39DP Gene

Publications for TTC39DP Gene

No publications were found for TTC39DP Gene.

Products for TTC39DP Gene

Sources for TTC39DP Gene

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