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Aliases for TTC39DP Gene

Aliases for TTC39DP Gene

  • Tetratricopeptide Repeat Domain 39D, Pseudogene 2 3 5

External Ids for TTC39DP Gene

Previous GeneCards Identifiers for TTC39DP Gene

  • GC02P038980
  • GC02P038729
  • GC02P038991

Summaries for TTC39DP Gene

GeneCards Summary for TTC39DP Gene

TTC39DP (Tetratricopeptide Repeat Domain 39D, Pseudogene) is a Pseudogene.

Additional gene information for TTC39DP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTC39DP Gene

Genomics for TTC39DP Gene

Regulatory Elements for TTC39DP Gene

Enhancers for TTC39DP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H038095 1.8 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -666.2 -666228 4 PKNOX1 ARNT FEZF1 ZBTB7B GLIS2 FOS KLF7 RUNX3 SP3 ZC3H11A CYP1B1 CYP1B1-AS1 LINC01883 TTC39DP ENSG00000225284 RPL31P16 SULT6B1 DHX57 ARHGEF33 RMDN2-AS1
GH02H038749 1.4 ENCODE dbSUPER 14.9 -12.6 -12575 3 MLX ZFP64 DMAP1 YY1 ZNF143 SP3 NFYC ZFP41 MEF2D SSRP1 SRSF7 SOS1 HNRNPLL DHX57 TTC39DP ENSG00000225284 LINC01883 ARHGEF33 GALM ASS1P2
GH02H038440 1.3 ENCODE dbSUPER 14.6 -322.4 -322447 0 ATF1 ARNT FEZF1 ZNF2 TCF12 ZNF121 GATA2 KLF7 ATF7 SP3 LINC01883 TTC39DP ENSG00000225284 ATL2 LOC101929596 RPLP0P6
GH02H038442 1 ENCODE dbSUPER 14.6 -319.8 -319785 2 PKNOX1 INSM2 MAX FEZF1 ZIC2 ZNF324 POLR2A ZNF366 ZNF600 PRDM10 LINC01883 TTC39DP ENSG00000225284 LOC101929596 ATL2 ENSG00000229160 RPLP0P6
GH02H038754 0.6 Ensembl dbSUPER 0.4 -8.9 -8934 1 IRF2 ASS1P2 GALM DHX57 ENSG00000229160 GEMIN6 TTC39DP
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TTC39DP on UCSC Golden Path with GeneCards custom track

Genomic Location for TTC39DP Gene

Chromosome:
2
Start:
38,763,534 bp from pter
End:
38,765,221 bp from pter
Size:
1,688 bases
Orientation:
Plus strand

Genomic View for TTC39DP Gene

Genes around TTC39DP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTC39DP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTC39DP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTC39DP Gene

Proteins for TTC39DP Gene

Post-translational modifications for TTC39DP Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTC39DP Gene

Domains & Families for TTC39DP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTC39DP Gene

Function for TTC39DP Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TTC39DP
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTC39DP Gene

Localization for TTC39DP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TTC39DP Gene

Pathways & Interactions for TTC39DP Gene

SuperPathways for TTC39DP Gene

No Data Available

Interacting Proteins for TTC39DP Gene

Gene Ontology (GO) - Biological Process for TTC39DP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TTC39DP Gene

Drugs & Compounds for TTC39DP Gene

No Compound Related Data Available

Transcripts for TTC39DP Gene

mRNA/cDNA for TTC39DP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TTC39DP
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TTC39DP Gene

No ASD Table

Relevant External Links for TTC39DP Gene

GeneLoc Exon Structure for
TTC39DP
ECgene alternative splicing isoforms for
TTC39DP

Expression for TTC39DP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TTC39DP Gene

mRNA differential expression in normal tissues according to GTEx for TTC39DP Gene

This gene is overexpressed in Testis (x23.4).

NURSA nuclear receptor signaling pathways regulating expression of TTC39DP Gene:

TTC39DP
genes like me logo Genes that share expression patterns with TTC39DP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TTC39DP Gene

Orthologs for TTC39DP Gene

Evolution for TTC39DP Gene

ENSEMBL:
Gene Tree for TTC39DP (if available)
TreeFam:
Gene Tree for TTC39DP (if available)

No data available for Orthologs for TTC39DP Gene

Paralogs for TTC39DP Gene

No data available for Paralogs for TTC39DP Gene

Variants for TTC39DP Gene

Relevant External Links for TTC39DP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TTC39DP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TTC39DP Gene

Disorders for TTC39DP Gene

No disorders were found for TTC39DP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TTC39DP Gene

Publications for TTC39DP Gene

No publications were found for TTC39DP Gene.

Products for TTC39DP Gene

Sources for TTC39DP Gene

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