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Aliases for TTC39DP Gene

Aliases for TTC39DP Gene

  • Tetratricopeptide Repeat Domain 39D, Pseudogene 2 3 5

External Ids for TTC39DP Gene

Previous GeneCards Identifiers for TTC39DP Gene

  • GC02P038980
  • GC02P038729
  • GC02P038991

Summaries for TTC39DP Gene

GeneCards Summary for TTC39DP Gene

TTC39DP (Tetratricopeptide Repeat Domain 39D, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TTC39DP Gene

Genomics for TTC39DP Gene

Regulatory Elements for TTC39DP Gene

Enhancers for TTC39DP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F038440 1.3 Ensembl ENCODE 16.2 -322.4 -322447 0.7 ATF1 FEZF1 ZNF2 ZNF121 GATA2 KLF7 ZNF263 SP3 REST TSHZ1 LINC01883 TTC39DP ENSG00000225284 ATL2 LOC101929596 RPLP0P6
GH02F038095 1.3 FANTOM5 ENCODE 16.2 -666.3 -666267 4.5 PKNOX1 FEZF1 GLIS2 KLF7 FOS SP3 TSHZ1 PPARG ZNF518A ZNF623 CYP1B1 CYP1B1-AS1 LINC01883 TTC39DP ENSG00000225284 RPL31P16 SULT6B1 ARHGEF33 RMDN2-AS1 CDC42EP3
GH02F038749 1.2 ENCODE 16.5 -12.6 -12575 3.5 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 TTC39DP ENSG00000225284 LINC01883 SOS1 ARHGEF33 ATL2 GALM ASS1P2 DHX57 LOC728730
GH02F038443 1 Ensembl ENCODE 16.2 -319.8 -319785 2.4 PKNOX1 TEAD4 INSM2 MAX FEZF1 ZIC2 ZNF324 ZNF366 PRDM10 ZNF600 LINC01883 TTC39DP ENSG00000225284 LOC101929596 ATL2 ENSG00000229160 RPLP0P6
GH02F038213 1 Ensembl 16.2 -549.1 -549134 1.2 PKNOX1 ATF1 ARNT FEZF1 ZNF2 GLIS2 KLF7 ZNF263 SP3 ZNF488 LINC01883 TTC39DP ENSG00000225284 ATL2 RPL7P12 ENSG00000273006
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TTC39DP on UCSC Golden Path with GeneCards custom track

Genomic Location for TTC39DP Gene

38,763,534 bp from pter
38,765,221 bp from pter
1,688 bases
Plus strand

Genomic View for TTC39DP Gene

Genes around TTC39DP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TTC39DP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TTC39DP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TTC39DP Gene

Proteins for TTC39DP Gene

Post-translational modifications for TTC39DP Gene

No Post-translational modifications

No data available for DME Specific Peptides for TTC39DP Gene

Domains & Families for TTC39DP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TTC39DP Gene

Function for TTC39DP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TTC39DP Gene

Localization for TTC39DP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TTC39DP Gene

Pathways & Interactions for TTC39DP Gene

SuperPathways for TTC39DP Gene

No Data Available

Interacting Proteins for TTC39DP Gene

Gene Ontology (GO) - Biological Process for TTC39DP Gene


No data available for Pathways by source and SIGNOR curated interactions for TTC39DP Gene

Transcripts for TTC39DP Gene

mRNA/cDNA for TTC39DP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TTC39DP Gene

No ASD Table

Relevant External Links for TTC39DP Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TTC39DP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TTC39DP Gene

mRNA differential expression in normal tissues according to GTEx for TTC39DP Gene

This gene is overexpressed in Testis (x23.4).

NURSA nuclear receptor signaling pathways regulating expression of TTC39DP Gene:

genes like me logo Genes that share expression patterns with TTC39DP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TTC39DP Gene

Orthologs for TTC39DP Gene

Evolution for TTC39DP Gene

Gene Tree for TTC39DP (if available)
Gene Tree for TTC39DP (if available)

No data available for Orthologs for TTC39DP Gene

Paralogs for TTC39DP Gene

No data available for Paralogs for TTC39DP Gene

Variants for TTC39DP Gene

Relevant External Links for TTC39DP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TTC39DP Gene

Disorders for TTC39DP Gene

No disorders were found for TTC39DP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TTC39DP Gene

Publications for TTC39DP Gene

No publications were found for TTC39DP Gene.

Products for TTC39DP Gene

Sources for TTC39DP Gene

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