Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TSTD3 Gene

Aliases for TSTD3 Gene

  • Thiosulfate Sulfurtransferase (Rhodanese)-Like Domain Containing 3 2 3 5
  • Rhodanese Domain-Containing Protein 3 4

External Ids for TSTD3 Gene

Previous GeneCards Identifiers for TSTD3 Gene

  • GC06P099969

Summaries for TSTD3 Gene

GeneCards Summary for TSTD3 Gene

TSTD3 (Thiosulfate Sulfurtransferase (Rhodanese)-Like Domain Containing 3) is a Protein Coding gene. An important paralog of this gene is TSTD1.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TSTD3 Gene

Genomics for TSTD3 Gene

Regulatory Elements for TSTD3 Gene

Enhancers for TSTD3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G099566 1.2 ENCODE 12.7 +47.4 47375 2.6 MLX CREB3L1 AGO1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC TBX21 RPS3P5 LOC101927365 USP45 FBXL4 TSTD3 ENSG00000272017 ENSG00000274603
GH06G099484 0.7 ENCODE 12 -35.5 -35450 2.3 PKNOX1 USF1 BHLHE40 NR2F1 JUNB DPF2 TBX21 JUND NFYB NBN RPS3P5 LOC101927365 TSTD3 USP45 PNISR PIR43976
GH06G099498 0.2 Ensembl 11.9 -22.2 -22193 0.2 TSTD3 USP45 PIR43976
GH06G099520 1.1 ENCODE 0.7 +1.0 1004 2.7 HDGF WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 FOS KLF13 RPS3P5 LOC101927365 TSTD3 USP45
GH06G099514 1.1 ENCODE 0.4 -5.3 -5314 2.8 HDGF HNRNPUL1 CREB3L1 AGO1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 RPS3P5 LOC101927365 CCNC PNISR ENSG00000272017 TSTD3 PIR43976
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TSTD3 on UCSC Golden Path with GeneCards custom track

Promoters for TSTD3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000200229 474 1400 HDGF WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF263 ZHX2

Genomic Location for TSTD3 Gene

Chromosome:
6
Start:
99,520,693 bp from pter
End:
99,579,288 bp from pter
Size:
58,596 bases
Orientation:
Plus strand

Genomic View for TSTD3 Gene

Genes around TSTD3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TSTD3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TSTD3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TSTD3 Gene

Proteins for TSTD3 Gene

  • Protein details for TSTD3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    H0UI37-TSTD3_HUMAN
    Recommended name:
    Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3
    Protein Accession:
    H0UI37

    Protein attributes for TSTD3 Gene

    Size:
    97 amino acids
    Molecular mass:
    11268 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TSTD3 Gene

Post-translational modifications for TSTD3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TSTD3 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TSTD3 Gene

Domains & Families for TSTD3 Gene

Protein Domains for TSTD3 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TSTD3: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TSTD3 Gene

Function for TSTD3 Gene

Animal Model Products

CRISPR Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TSTD3 Gene

Localization for TSTD3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TSTD3 Gene

Pathways & Interactions for TSTD3 Gene

SuperPathways for TSTD3 Gene

No Data Available

Interacting Proteins for TSTD3 Gene

Gene Ontology (GO) - Biological Process for TSTD3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TSTD3 Gene

Transcripts for TSTD3 Gene

mRNA/cDNA for TSTD3 Gene

(2) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TSTD3 Gene

Thiosulfate sulfurtransferase (rhodanese)-like domain containing 3:
Representative Sequences:

CRISPR Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TSTD3 Gene

No ASD Table

Relevant External Links for TSTD3 Gene

GeneLoc Exon Structure for
TSTD3
ECgene alternative splicing isoforms for
TSTD3

Expression for TSTD3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TSTD3 Gene

NURSA nuclear receptor signaling pathways regulating expression of TSTD3 Gene:

TSTD3

SOURCE GeneReport for Unigene cluster for TSTD3 Gene:

Hs.634506
genes like me logo Genes that share expression patterns with TSTD3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TSTD3 Gene

Orthologs for TSTD3 Gene

Evolution for TSTD3 Gene

ENSEMBL:
Gene Tree for TSTD3 (if available)
TreeFam:
Gene Tree for TSTD3 (if available)

No data available for Orthologs for TSTD3 Gene

Paralogs for TSTD3 Gene

Paralogs for TSTD3 Gene

genes like me logo Genes that share paralogs with TSTD3: view

Variants for TSTD3 Gene

Sequence variations from dbSNP and Humsavar for TSTD3 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000008548 -- 99,461,044(+) TTCAT(A/G)TAAAT intron-variant, nc-transcript-variant, utr-variant-3-prime
rs1000021151 -- 99,540,163(+) CTTCA(G/T)AAATG intron-variant
rs1000080320 -- 99,460,682(+) GTGAC(C/T)GGTCT intron-variant, nc-transcript-variant, utr-variant-3-prime
rs1000083214 -- 99,450,280(+) ATAAA(-/C)CACTA intron-variant
rs1000129452 -- 99,432,458(+) TAAGA(A/G)TATTT intron-variant, nc-transcript-variant, downstream-variant-500B, utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for TSTD3 Gene

Variant ID Type Subtype PubMed ID
dgv390n21 CNV loss 19592680
esv2672910 CNV deletion 23128226
esv3610121 CNV loss 21293372
nsv1029536 CNV loss 25217958

Relevant External Links for TSTD3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TSTD3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TSTD3 Gene

Disorders for TSTD3 Gene

Relevant External Links for TSTD3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TSTD3

No disorders were found for TSTD3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TSTD3 Gene

Publications for TSTD3 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
  2. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 4 64

Products for TSTD3 Gene

Sources for TSTD3 Gene

Content
Loading form....