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Aliases for TSSC2 Gene

Aliases for TSSC2 Gene

  • Tumor Suppressing Subtransferable Candidate 2 Pseudogene 2 3
  • Asparagine-Linked Glycosylation 1 Homolog (Yeast 2
  • Beta-1,4-Mannosyltransferase) (ALG1) Pseudogene 2
  • Tumor Suppressing Subtransferable Candidate 2 2
  • Tumor-Supressing STF CDNA 2 2

External Ids for TSSC2 Gene

Previous GeneCards Identifiers for TSSC2 Gene

  • GC00U990391
  • GC11U900682
  • GC11P003382
  • GC11P003422
  • GC11P003406

Summaries for TSSC2 Gene

GeneCards Summary for TSSC2 Gene

TSSC2 (Tumor Suppressing Subtransferable Candidate 2 Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TSSC2 Gene

Genomics for TSSC2 Gene

Genomic Location for TSSC2 Gene

3,380,961 bp from pter
3,409,148 bp from pter
28,188 bases
Plus strand

Genomic View for TSSC2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TSSC2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TSSC2 Gene

No data available for Regulatory Elements for TSSC2 Gene

Proteins for TSSC2 Gene

Post-translational modifications for TSSC2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TSSC2 Gene

Domains for TSSC2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TSSC2 Gene

Function for TSSC2 Gene

Molecular function for TSSC2 Gene

GENATLAS Biochemistry:
tumor suppressing subchromosomal transferable DNA fragment (STF2),inducing tumor cell growth arrest in malignant cell line (i.e) rhabdomyosarcoma,homolog of C elegans beta-mannosyltransferase

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TSSC2 Gene

Localization for TSSC2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TSSC2 Gene

Pathways for TSSC2 Gene

SuperPathways for TSSC2 Gene

No Data Available

Interacting Proteins for TSSC2 Gene

Gene Ontology (GO) - Biological Process for TSSC2 Gene


No data available for Pathways by source for TSSC2 Gene

Transcripts for TSSC2 Gene

mRNA/cDNA for TSSC2 Gene

(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TSSC2

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TSSC2 Gene

No ASD Table

Relevant External Links for TSSC2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TSSC2 Gene

mRNA expression in normal human tissues for TSSC2 Gene

genes like me logo Genes that share expressions with TSSC2: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for TSSC2 Gene

Orthologs for TSSC2 Gene

Evolution for TSSC2 Gene

Gene Tree for TSSC2 (if available)
Gene Tree for TSSC2 (if available)

No data available for Orthologs for TSSC2 Gene

Paralogs for TSSC2 Gene

No data available for Paralogs for TSSC2 Gene

Variants for TSSC2 Gene

Sequence variations from dbSNP and Humsavar for TSSC2 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs916618 -- 3,383,115(-) GATGA(A/T)CTCCT intron-variant
rs956453 -- 3,386,299(-) GATTG(A/G)CAAAT intron-variant
rs956454 -- 3,386,182(-) TACTC(A/C)TTCAT intron-variant
rs1808157 -- 3,405,762(-) GGTCA(C/T)GCCTG intron-variant
rs1808158 -- 3,405,020(-) CCACC(C/T)CTGTT intron-variant

Relevant External Links for TSSC2 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TSSC2 Gene

Disorders for TSSC2 Gene

No disorders were found for TSSC2 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TSSC2 Gene

Publications for TSSC2 Gene

  1. A 2.5-Mb transcript map of a tumor-suppressing subchromosomal transferable fragment from 11p15.5, and isolation and sequence analysis of three novel genes. (PMID: 9403053) Hu R.-J. … Feinberg A.P. (Genomics 1997) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for TSSC2 Gene

Sources for TSSC2 Gene

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