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Aliases for TSPY6P Gene

Aliases for TSPY6P Gene

  • Testis Specific Protein, Y-Linked 6, Pseudogene 2 3
  • Testis Specific Protein, Y-Linked Pseudogene 6 2 3
  • Testis Specific Protein, Y-Linked 6 (Pseudogene) 3
  • TSPYP6 3

External Ids for TSPY6P Gene

Previous HGNC Symbols for TSPY6P Gene

  • TSPYP6

Previous GeneCards Identifiers for TSPY6P Gene

  • GC0YP009959
  • GC0YP009346

Summaries for TSPY6P Gene

GeneCards Summary for TSPY6P Gene

TSPY6P (Testis Specific Protein, Y-Linked 6, Pseudogene) is a Pseudogene. An important paralog of this gene is TSPY2.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TSPY6P Gene

Genomics for TSPY6P Gene

Genomic Location for TSPY6P Gene

Start:
9,507,550 bp from pter
End:
9,510,363 bp from pter
Size:
2,814 bases
Orientation:
Plus strand

Genomic View for TSPY6P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TSPY6P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TSPY6P Gene

No data available for Regulatory Elements for TSPY6P Gene

Proteins for TSPY6P Gene

  • Protein details for TSPY6P Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    R4GNE9
    Recommended name:
    Protein TSPY6P
    Protein Accession:
    R4GNE9
    Secondary Accessions:

    Protein attributes for TSPY6P Gene

    Size:
    314 amino acids
    Molecular mass:
    35718 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TSPY6P Gene

Proteomics data for TSPY6P Gene at MOPED

Post-translational modifications for TSPY6P Gene

No Post-translational modifications

Other Protein References for TSPY6P Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TSPY6P Gene

Domains for TSPY6P Gene

Protein Domains for TSPY6P Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TSPY6P: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TSPY6P Gene

Function for TSPY6P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TSPY6P Gene

Localization for TSPY6P Gene

Gene Ontology (GO) - Cellular Components for TSPY6P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus --
genes like me logo Genes that share ontologies with TSPY6P: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for TSPY6P Gene

Pathways for TSPY6P Gene

SuperPathways for TSPY6P Gene

No Data Available

Interacting Proteins for TSPY6P Gene

Gene Ontology (GO) - Biological Process for TSPY6P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006334 nucleosome assembly --
genes like me logo Genes that share ontologies with TSPY6P: view

No data available for Pathways by source for TSPY6P Gene

Transcripts for TSPY6P Gene

mRNA/cDNA for TSPY6P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TSPY6P Gene

No ASD Table

Relevant External Links for TSPY6P Gene

GeneLoc Exon Structure for
TSPY6P
ECgene alternative splicing isoforms for
TSPY6P

Expression for TSPY6P Gene

mRNA expression in normal human tissues for TSPY6P Gene

mRNA differential expression in normal tissues according to GTEx for TSPY6P Gene

This gene is overexpressed in Testis (53.0).
genes like me logo Genes that share expressions with TSPY6P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for TSPY6P Gene

Orthologs for TSPY6P Gene

This gene was present in the common ancestor of animals.

Orthologs for TSPY6P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 97 (a)
OneToMany
cow
(Bos Taurus)
Mammalia -- 36
  • 43 (a)
ManyToMany
-- 36
  • 35 (a)
ManyToMany
-- 36
  • 35 (a)
ManyToMany
-- 36
  • 37 (a)
ManyToMany
-- 36
  • 33 (a)
ManyToMany
-- 36
  • 31 (a)
ManyToMany
-- 36
  • 28 (a)
ManyToMany
-- 36
  • 36 (a)
ManyToMany
-- 36
  • 27 (a)
ManyToMany
-- 36
  • 41 (a)
ManyToMany
TSPY-M2 36
  • 35 (a)
ManyToMany
TSPY-M2 36
  • 41 (a)
ManyToMany
TSPY-M2 36
  • 41 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 25 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 26 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii TSPY2 36
  • 16 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta Set 36
  • 26 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea spr-2 36
  • 20 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.9132 36
  • 19 (a)
OneToMany
Species with no ortholog for TSPY6P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for TSPY6P Gene

ENSEMBL:
Gene Tree for TSPY6P (if available)
TreeFam:
Gene Tree for TSPY6P (if available)

Paralogs for TSPY6P Gene

Paralogs for TSPY6P Gene

Selected SIMAP similar genes for TSPY6P Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with TSPY6P: view

Variants for TSPY6P Gene

Relevant External Links for TSPY6P Gene

HapMap Linkage Disequilibrium report
TSPY6P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TSPY6P Gene

Disorders for TSPY6P Gene

No disorders were found for TSPY6P Gene.

No data available for UniProtKB/Swiss-Prot for TSPY6P Gene

Publications for TSPY6P Gene

No publications were found for TSPY6P Gene.

Products for TSPY6P Gene

Sources for TSPY6P Gene

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