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Aliases for TSPEAR-AS2 Gene

Subcategory (RNA class) for TSPEAR-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TSPEAR-AS2 Gene

  • TSPEAR Antisense RNA 2 2 3 4 5
  • C21orf90 3 4
  • Chromosome 21 Open Reading Frame 90 2
  • TSPEAR Antisense Gene Protein 2 4

External Ids for TSPEAR-AS2 Gene

Previous HGNC Symbols for TSPEAR-AS2 Gene

  • C21orf90

Previous GeneCards Identifiers for TSPEAR-AS2 Gene

  • GC21P044518
  • GC21P044519

Summaries for TSPEAR-AS2 Gene

GeneCards Summary for TSPEAR-AS2 Gene

TSPEAR-AS2 (TSPEAR Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TSPEAR-AS2 Gene

Genomics for TSPEAR-AS2 Gene

Regulatory Elements for TSPEAR-AS2 Gene

Enhancers for TSPEAR-AS2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TSPEAR-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TSPEAR-AS2 Gene

44,517,215 bp from pter
44,525,952 bp from pter
8,738 bases
Plus strand

Genomic View for TSPEAR-AS2 Gene

Genes around TSPEAR-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TSPEAR-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TSPEAR-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TSPEAR-AS2 Gene

Proteins for TSPEAR-AS2 Gene

  • Protein details for TSPEAR-AS2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein TSPEAR-AS2
    Protein Accession:
    Secondary Accessions:
    • Q3MIX8

    Protein attributes for TSPEAR-AS2 Gene

    65 amino acids
    Molecular mass:
    7097 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TSPEAR-AS2 Gene


neXtProt entry for TSPEAR-AS2 Gene

Proteomics data for TSPEAR-AS2 Gene at MOPED

Post-translational modifications for TSPEAR-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TSPEAR-AS2 Gene

Domains & Families for TSPEAR-AS2 Gene

Protein Domains for TSPEAR-AS2 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TSPEAR-AS2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TSPEAR-AS2 Gene

Function for TSPEAR-AS2 Gene

Phenotypes for TSPEAR-AS2 Gene

GenomeRNAi human phenotypes for TSPEAR-AS2:
genes like me logo Genes that share phenotypes with TSPEAR-AS2: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TSPEAR-AS2 Gene

Localization for TSPEAR-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TSPEAR-AS2 Gene

Pathways & Interactions for TSPEAR-AS2 Gene

SuperPathways for TSPEAR-AS2 Gene

No Data Available

Interacting Proteins for TSPEAR-AS2 Gene

Gene Ontology (GO) - Biological Process for TSPEAR-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for TSPEAR-AS2 Gene

Drugs & Compounds for TSPEAR-AS2 Gene

No Compound Related Data Available

Transcripts for TSPEAR-AS2 Gene


(1) REFSEQ mRNAs :
(14) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TSPEAR-AS2 Gene

No ASD Table

Relevant External Links for TSPEAR-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TSPEAR-AS2 Gene

mRNA expression in normal human tissues for TSPEAR-AS2 Gene

mRNA Expression by UniProt/SwissProt for TSPEAR-AS2 Gene

Tissue specificity: Widely expressed. Not expressed in liver and muscle.
genes like me logo Genes that share expression patterns with TSPEAR-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for TSPEAR-AS2 Gene

Orthologs for TSPEAR-AS2 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for TSPEAR-AS2 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia C21orf90 36
  • 98 (a)
Species with no ortholog for TSPEAR-AS2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TSPEAR-AS2 Gene

Gene Tree for TSPEAR-AS2 (if available)
Gene Tree for TSPEAR-AS2 (if available)

Paralogs for TSPEAR-AS2 Gene

No data available for Paralogs for TSPEAR-AS2 Gene

Variants for TSPEAR-AS2 Gene

Variation tolerance for TSPEAR-AS2 Gene

Gene Damage Index Score: 0.05; 1.12% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for TSPEAR-AS2 Gene

Disorders for TSPEAR-AS2 Gene

Relevant External Links for TSPEAR-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for TSPEAR-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TSPEAR-AS2 Gene

Publications for TSPEAR-AS2 Gene

  1. Nineteen additional unpredicted transcripts from human chromosome 21. (PMID: 12036297) Reymond A. … Antonarakis S.E. (Genomics 2002) 2 3 4 67
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for TSPEAR-AS2 Gene

Sources for TSPEAR-AS2 Gene