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Aliases for TSPEAR-AS1 Gene

Subcategory (RNA class) for TSPEAR-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TSPEAR-AS1 Gene

  • TSPEAR Antisense RNA 1 2 3 5
  • TSPEAR Antisense RNA 1 (Non-Protein Coding) 2 3
  • C21orf31 3

External Ids for TSPEAR-AS1 Gene

Previous GeneCards Identifiers for TSPEAR-AS1 Gene

  • GC21P045927
  • GC21P045936
  • GC21P045942
  • GC21P045955
  • GC21P045965

Summaries for TSPEAR-AS1 Gene

GeneCards Summary for TSPEAR-AS1 Gene

TSPEAR-AS1 (TSPEAR Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TSPEAR-AS1 Gene

Genomics for TSPEAR-AS1 Gene

Regulatory Elements for TSPEAR-AS1 Gene

Enhancers for TSPEAR-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TSPEAR-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for TSPEAR-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TSPEAR-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TSPEAR-AS1 Gene

Chromosome:
21
Start:
44,506,044 bp from pter
End:
44,516,575 bp from pter
Size:
10,532 bases
Orientation:
Plus strand

Genomic View for TSPEAR-AS1 Gene

Genes around TSPEAR-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TSPEAR-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TSPEAR-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TSPEAR-AS1 Gene

Proteins for TSPEAR-AS1 Gene

Post-translational modifications for TSPEAR-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TSPEAR-AS1 Gene

Domains & Families for TSPEAR-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TSPEAR-AS1 Gene

Function for TSPEAR-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TSPEAR-AS1 Gene

Localization for TSPEAR-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TSPEAR-AS1 Gene

Pathways & Interactions for TSPEAR-AS1 Gene

SuperPathways for TSPEAR-AS1 Gene

No Data Available

Interacting Proteins for TSPEAR-AS1 Gene

Gene Ontology (GO) - Biological Process for TSPEAR-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TSPEAR-AS1 Gene

Drugs & Compounds for TSPEAR-AS1 Gene

No Compound Related Data Available

Transcripts for TSPEAR-AS1 Gene

mRNA/cDNA for TSPEAR-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TSPEAR-AS1 Gene

No ASD Table

Relevant External Links for TSPEAR-AS1 Gene

GeneLoc Exon Structure for
TSPEAR-AS1
ECgene alternative splicing isoforms for
TSPEAR-AS1

Expression for TSPEAR-AS1 Gene

mRNA expression in normal human tissues for TSPEAR-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TSPEAR-AS1 Gene

This gene is overexpressed in Spleen (x5.8) and Liver (x4.3).
genes like me logo Genes that share expression patterns with TSPEAR-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TSPEAR-AS1 Gene

Orthologs for TSPEAR-AS1 Gene

Evolution for TSPEAR-AS1 Gene

ENSEMBL:
Gene Tree for TSPEAR-AS1 (if available)
TreeFam:
Gene Tree for TSPEAR-AS1 (if available)

No data available for Orthologs for TSPEAR-AS1 Gene

Paralogs for TSPEAR-AS1 Gene

No data available for Paralogs for TSPEAR-AS1 Gene

Variants for TSPEAR-AS1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TSPEAR-AS1 Gene

Disorders for TSPEAR-AS1 Gene

Relevant External Links for TSPEAR-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TSPEAR-AS1

No disorders were found for TSPEAR-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TSPEAR-AS1 Gene

Publications for TSPEAR-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67
  2. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 3

Products for TSPEAR-AS1 Gene

Sources for TSPEAR-AS1 Gene

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