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Aliases for TSGA13 Gene

Aliases for TSGA13 Gene

  • Testis Specific, 13 2 3

External Ids for TSGA13 Gene

Previous GeneCards Identifiers for TSGA13 Gene

  • GC07M128693
  • GC07M129755
  • GC07M129769
  • GC07M129703
  • GC07M129753
  • GC07M129810
  • GC07M129934
  • GC07M130004
  • GC07M130353
  • GC07M124668

Summaries for TSGA13 Gene

GeneCards Summary for TSGA13 Gene

TSGA13 (Testis Specific, 13) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TSGA13 Gene

Genomics for TSGA13 Gene

Regulatory Elements for TSGA13 Gene

Genomic Location for TSGA13 Gene

Start:
130,668,646 bp from pter
End:
130,687,432 bp from pter
Size:
18,787 bases
Orientation:
Minus strand

Genomic View for TSGA13 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TSGA13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TSGA13 Gene

Proteins for TSGA13 Gene

  • Protein details for TSGA13 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96PP4-TSG13_HUMAN
    Recommended name:
    Testis-specific gene 13 protein
    Protein Accession:
    Q96PP4
    Secondary Accessions:
    • B3KSC9

    Protein attributes for TSGA13 Gene

    Size:
    275 amino acids
    Molecular mass:
    31778 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TSGA13 Gene

Proteomics data for TSGA13 Gene at MOPED

Post-translational modifications for TSGA13 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TSGA13 Gene

No data available for DME Specific Peptides for TSGA13 Gene

Domains for TSGA13 Gene

Protein Domains for TSGA13 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for TSGA13 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TSGA13: view

No data available for Gene Families and UniProtKB/Swiss-Prot for TSGA13 Gene

Function for TSGA13 Gene

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TSGA13

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TSGA13 Gene

Localization for TSGA13 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TSGA13 Gene COMPARTMENTS Subcellular localization image for TSGA13 gene
Compartment Confidence
nucleus 3
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for TSGA13 Gene

Pathways for TSGA13 Gene

SuperPathways for TSGA13 Gene

No Data Available

Interacting Proteins for TSGA13 Gene

Gene Ontology (GO) - Biological Process for TSGA13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:1903955 positive regulation of protein targeting to mitochondrion IMP 24270810
genes like me logo Genes that share ontologies with TSGA13: view

No data available for Pathways by source for TSGA13 Gene

Transcripts for TSGA13 Gene

Unigene Clusters for TSGA13 Gene

Testis specific, 13:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TSGA13

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TSGA13 Gene

No ASD Table

Relevant External Links for TSGA13 Gene

GeneLoc Exon Structure for
TSGA13
ECgene alternative splicing isoforms for
TSGA13

Expression for TSGA13 Gene

mRNA expression in normal human tissues for TSGA13 Gene

mRNA differential expression in normal tissues according to GTEx for TSGA13 Gene

This gene is overexpressed in Testis (52.8).

SOURCE GeneReport for Unigene cluster for TSGA13 Gene Hs.592266

mRNA Expression by UniProt/SwissProt for TSGA13 Gene

Q96PP4-TSG13_HUMAN
Tissue specificity: Testis-specific
genes like me logo Genes that share expressions with TSGA13: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and Protein expression for TSGA13 Gene

Orthologs for TSGA13 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TSGA13 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TSGA13 35
  • 99.39 (n)
  • 99.27 (a)
TSGA13 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia TSGA13 35
  • 82.29 (n)
  • 70.85 (a)
TSGA13 36
  • 71 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tsga13 35
  • 74.66 (n)
  • 59.78 (a)
Tsga13 16
Tsga13 36
  • 59 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia TSGA13 36
  • 45 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tsga13 35
  • 73.51 (n)
  • 59.33 (a)
Species with no ortholog for TSGA13:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TSGA13 Gene

ENSEMBL:
Gene Tree for TSGA13 (if available)
TreeFam:
Gene Tree for TSGA13 (if available)

Paralogs for TSGA13 Gene

No data available for Paralogs for TSGA13 Gene

Variants for TSGA13 Gene

Sequence variations from dbSNP and Humsavar for TSGA13 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs290798 -- 130,687,157(+) CAGGC(A/G)TGAGC upstream-variant-2KB
rs1038638 -- 130,676,252(-) TGAAA(C/T)GTGTG intron-variant
rs1155219 -- 130,687,972(+) GAAGC(A/G)CTAAC upstream-variant-2KB
rs1980294 -- 130,673,400(+) TCTGT(C/T)TGTCT intron-variant
rs2101452 -- 130,680,594(+) AATTT(G/T)CCTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TSGA13 Gene

Variant ID Type Subtype PubMed ID
nsv831132 CNV Gain+Loss 17160897

Relevant External Links for TSGA13 Gene

HapMap Linkage Disequilibrium report
TSGA13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TSGA13 Gene

Disorders for TSGA13 Gene

Relevant External Links for TSGA13

Genetic Association Database (GAD)
TSGA13
Human Genome Epidemiology (HuGE) Navigator
TSGA13
genes like me logo Genes that share disorders with TSGA13: view

No data available for UniProtKB/Swiss-Prot for TSGA13 Gene

Publications for TSGA13 Gene

  1. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Imprinting analysis of 10 genes and/or transcripts in a 1.5-Mb MEST- flanking region at human chromosome 7q32. (PMID: 14962666) Yamada T. … Kishino T. (Genomics 2004) 3
  4. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  5. High-content genome-wide RNAi screens identify regulators of parkin upstream of mitophagy. (PMID: 24270810) Hasson S.A. … Youle R.J. (Nature 2013) 3

Products for TSGA13 Gene

Sources for TSGA13 Gene

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