Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TSC22D1-AS1 Gene

Subcategory (RNA class) for TSC22D1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TSC22D1-AS1 Gene

  • TSC22D1 Antisense RNA 1 2 3
  • TSC22D1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TSC22D1-AS1 Gene

Previous GeneCards Identifiers for TSC22D1-AS1 Gene

  • GC13P045151

Summaries for TSC22D1-AS1 Gene

GeneCards Summary for TSC22D1-AS1 Gene

TSC22D1-AS1 (TSC22D1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TSC22D1-AS1 Gene

Genomics for TSC22D1-AS1 Gene

Genomic Location for TSC22D1-AS1 Gene

Start:
44,575,893 bp from pter
End:
44,580,432 bp from pter
Size:
4,540 bases
Orientation:
Plus strand

Genomic View for TSC22D1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TSC22D1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TSC22D1-AS1 Gene

No data available for Regulatory Elements for TSC22D1-AS1 Gene

Proteins for TSC22D1-AS1 Gene

Post-translational modifications for TSC22D1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TSC22D1-AS1 Gene

Domains for TSC22D1-AS1 Gene

Gene Families for TSC22D1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TSC22D1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TSC22D1-AS1 Gene

Function for TSC22D1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TSC22D1-AS1 Gene

Localization for TSC22D1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TSC22D1-AS1 Gene

Pathways for TSC22D1-AS1 Gene

SuperPathways for TSC22D1-AS1 Gene

No Data Available

Interacting Proteins for TSC22D1-AS1 Gene

Gene Ontology (GO) - Biological Process for TSC22D1-AS1 Gene

None

No data available for Pathways by source for TSC22D1-AS1 Gene

Transcripts for TSC22D1-AS1 Gene

mRNA/cDNA for TSC22D1-AS1 Gene

(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TSC22D1-AS1 Gene

TSC22D1 antisense RNA 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TSC22D1-AS1
    • Block miRNA regulation of TSC22D1-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for TSC22D1-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for TSC22D1-AS1 Gene

    No ASD Table

    Relevant External Links for TSC22D1-AS1 Gene

    GeneLoc Exon Structure for
    TSC22D1-AS1
    ECgene alternative splicing isoforms for
    TSC22D1-AS1

    Expression for TSC22D1-AS1 Gene

    mRNA expression in normal human tissues for TSC22D1-AS1 Gene

    mRNA expression in normal human tissues for TSC22D1-AS1 Gene

    SOURCE GeneReport for Unigene cluster for TSC22D1-AS1 Gene Hs.624196

    genes like me logo Genes that share expressions with TSC22D1-AS1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for TSC22D1-AS1 Gene

    Orthologs for TSC22D1-AS1 Gene

    Evolution for TSC22D1-AS1 Gene

    ENSEMBL:
    Gene Tree for TSC22D1-AS1 (if available)
    TreeFam:
    Gene Tree for TSC22D1-AS1 (if available)

    No data available for Orthologs for TSC22D1-AS1 Gene

    Paralogs for TSC22D1-AS1 Gene

    No data available for Paralogs for TSC22D1-AS1 Gene

    Variants for TSC22D1-AS1 Gene

    Sequence variations from dbSNP and Humsavar for TSC22D1-AS1 Gene

    SNP ID Clin Chr 13 pos Sequence Context AA Info Type MAF
    rs11617024 -- 44,579,567(+) CTGAT(A/G)TGCTT nc-transcript-variant
    rs35434672 -- 44,580,070(+) AGGCA(-/T)GGGGA nc-transcript-variant
    rs61947994 -- 44,579,992(+) ACCCC(A/G)TCTCT nc-transcript-variant
    rs71429488 -- 44,579,722(+) AGGGT(G/T)GGGGT nc-transcript-variant
    rs71429489 -- 44,580,517(+) TGTTG(G/T)TGATG downstream-variant-500B

    Relevant External Links for TSC22D1-AS1 Gene

    HapMap Linkage Disequilibrium report
    TSC22D1-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TSC22D1-AS1 Gene

    Disorders for TSC22D1-AS1 Gene

    No disorders were found for TSC22D1-AS1 Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TSC22D1-AS1 Gene

    Publications for TSC22D1-AS1 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

    Products for TSC22D1-AS1 Gene

    Sources for TSC22D1-AS1 Gene

    Back to Top

    Content