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Aliases for TRY2P Gene

Aliases for TRY2P Gene

  • Trypsinogen-Like Pseudogene 3 5

External Ids for TRY2P Gene

Previous GeneCards Identifiers for TRY2P Gene

  • GC07M141419
  • GC07M141612
  • GC07Mg41303
  • GC07M141967

Summaries for TRY2P Gene

GeneCards Summary for TRY2P Gene

TRY2P (Trypsinogen-Like Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRY2P Gene

Genomics for TRY2P Gene

Regulatory Elements for TRY2P Gene

Enhancers for TRY2P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F142307 0.4 FANTOM5 6.2 -35.4 -35405 0.1 REST TRY2P TAS2R38 OR9A4 TRBV3-1 TRBV2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRY2P on UCSC Golden Path with GeneCards custom track

Genomic Location for TRY2P Gene

Chromosome:
7
Start:
142,265,833 bp from pter
End:
142,272,249 bp from pter
Size:
6,417 bases
Orientation:
Minus strand

Genomic View for TRY2P Gene

Genes around TRY2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRY2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRY2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRY2P Gene

Proteins for TRY2P Gene

Post-translational modifications for TRY2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRY2P Gene

Domains & Families for TRY2P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRY2P Gene

Function for TRY2P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRY2P Gene

Localization for TRY2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRY2P Gene

Pathways & Interactions for TRY2P Gene

SuperPathways for TRY2P Gene

No Data Available

Interacting Proteins for TRY2P Gene

Gene Ontology (GO) - Biological Process for TRY2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRY2P Gene

Transcripts for TRY2P Gene

mRNA/cDNA for TRY2P Gene

(8) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRY2P Gene

No ASD Table

Relevant External Links for TRY2P Gene

GeneLoc Exon Structure for
TRY2P

Expression for TRY2P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRY2P Gene

genes like me logo Genes that share expression patterns with TRY2P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRY2P Gene

Orthologs for TRY2P Gene

Evolution for TRY2P Gene

ENSEMBL:
Gene Tree for TRY2P (if available)
TreeFam:
Gene Tree for TRY2P (if available)

No data available for Orthologs for TRY2P Gene

Paralogs for TRY2P Gene

No data available for Paralogs for TRY2P Gene

Variants for TRY2P Gene

Sequence variations from dbSNP and Humsavar for TRY2P Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs10228619 -- 142,273,632(+) GCCCA(C/T)GACCC upstream-variant-2KB
rs10228751 -- 142,273,796(+) ACTAA(A/C)CTAAT upstream-variant-2KB
rs10480336 -- 142,268,260(+) AAAAA(A/T)GAATC downstream-variant-500B
rs111951576 -- 142,273,121(+) TTTTC(-/T)TTTTA upstream-variant-2KB
rs112366544 -- 142,268,658(+) CAGCA(C/T)TCCAT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for TRY2P Gene

Variant ID Type Subtype PubMed ID
esv33962 CNV gain+loss 17666407
nsv1018286 CNV gain 25217958
nsv1035111 CNV gain 25217958
nsv465131 CNV loss 19166990
nsv608591 CNV gain 21841781

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for TRY2P Gene

Disorders for TRY2P Gene

Relevant External Links for TRY2P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TRY2P

No disorders were found for TRY2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRY2P Gene

Publications for TRY2P Gene

  1. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  3. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L. … Hood L. (Science 1996) 3 64

Products for TRY2P Gene

Sources for TRY2P Gene

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