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Aliases for TRY-GTA5-1 Gene

Subcategory (RNA class) for TRY-GTA5-1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TRY-GTA5-1 Gene

  • Transfer RNA-Tyr (GTA) 5-1 2 3
  • Transfer RNA Tyrosine 15 (Anticodon GUA) 2 3
  • Transfer RNA-Tyr (GTA) 5-4 2 3
  • TRY-GTA5-4 3
  • AC084082.3 5
  • TRNAY15 3

External Ids for TRY-GTA5-1 Gene

Previous HGNC Symbols for TRY-GTA5-1 Gene

  • TRNAY15
  • TRY-GTA5-4

Previous GeneCards Identifiers for TRY-GTA5-1 Gene

  • GC14M020654

Summaries for TRY-GTA5-1 Gene

GeneCards Summary for TRY-GTA5-1 Gene

TRY-GTA5-1 (Transfer RNA-Tyr (GTA) 5-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRY-GTA5-1 Gene

Genomics for TRY-GTA5-1 Gene

Regulatory Elements for TRY-GTA5-1 Gene

Enhancers for TRY-GTA5-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F066136 1.3 Ensembl ENCODE 12.3 +24.9 24875 1.3 CTCF ZNF316 FOS NFE2 TRY-GTA5-1 CRH ADHFE1 RRS1 RRS1-AS1 GC08P066131 GC08P066135 PIR59286 GC08P066170
GH08F066141 1.6 FANTOM5 Ensembl ENCODE 12.3 +29.7 29724 2.4 HDAC1 ATF1 CBX3 TBL1XR1 ARNT RAD21 CHAMP1 GATA2 ETV6 CREM TRY-GTA5-1 CRH ADHFE1 RRS1 RRS1-AS1 LINC00967 GC08P066131 GC08P066135 GC08P066170 PIR59286
GH08F066139 0.2 ENCODE 12.3 +26.5 26534 0.2 NFE2L2 TRY-GTA5-1 CRH RRS1 RRS1-AS1 ADHFE1 GC08P066131 GC08P066135 PIR59286 GC08P066170
GH08F066105 0.9 ENCODE 0.4 -6.8 -6807 0.2 HDAC1 CBX3 TBL1XR1 CHAMP1 GATA2 FOS ETV6 CREM ZBTB11 JUNB CRH GC08M066089 TRIM55 TRY-GTA5-1
GH08F066103 0.2 Ensembl 0.4 -9.1 -9136 0.7 IKZF1 ETV6 SPI1 CRH ADHFE1 RRS1 RRS1-AS1 GC08M066089 TRIM55 TRY-GTA5-1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRY-GTA5-1 on UCSC Golden Path with GeneCards custom track

Promoters for TRY-GTA5-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001393406 1233 3001 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1

Genomic Location for TRY-GTA5-1 Gene

Chromosome:
8
Start:
66,112,667 bp from pter
End:
66,115,207 bp from pter
Size:
2,541 bases
Orientation:
Plus strand

Genomic View for TRY-GTA5-1 Gene

Genes around TRY-GTA5-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRY-GTA5-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRY-GTA5-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRY-GTA5-1 Gene

Proteins for TRY-GTA5-1 Gene

Post-translational modifications for TRY-GTA5-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRY-GTA5-1 Gene

Domains & Families for TRY-GTA5-1 Gene

Gene Families for TRY-GTA5-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRY-GTA5-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRY-GTA5-1 Gene

Function for TRY-GTA5-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRY-GTA5-1 Gene

Localization for TRY-GTA5-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRY-GTA5-1 Gene

Pathways & Interactions for TRY-GTA5-1 Gene

SuperPathways for TRY-GTA5-1 Gene

No Data Available

Interacting Proteins for TRY-GTA5-1 Gene

Gene Ontology (GO) - Biological Process for TRY-GTA5-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRY-GTA5-1 Gene

Transcripts for TRY-GTA5-1 Gene

mRNA/cDNA for TRY-GTA5-1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRY-GTA5-1 Gene

No ASD Table

Relevant External Links for TRY-GTA5-1 Gene

GeneLoc Exon Structure for
TRY-GTA5-1
ECgene alternative splicing isoforms for
TRY-GTA5-1

Expression for TRY-GTA5-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRY-GTA5-1 Gene

Orthologs for TRY-GTA5-1 Gene

Evolution for TRY-GTA5-1 Gene

ENSEMBL:
Gene Tree for TRY-GTA5-1 (if available)
TreeFam:
Gene Tree for TRY-GTA5-1 (if available)

No data available for Orthologs for TRY-GTA5-1 Gene

Paralogs for TRY-GTA5-1 Gene

No data available for Paralogs for TRY-GTA5-1 Gene

Variants for TRY-GTA5-1 Gene

Relevant External Links for TRY-GTA5-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRY-GTA5-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRY-GTA5-1 Gene

Disorders for TRY-GTA5-1 Gene

No disorders were found for TRY-GTA5-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRY-GTA5-1 Gene

Publications for TRY-GTA5-1 Gene

No publications were found for TRY-GTA5-1 Gene.

Products for TRY-GTA5-1 Gene

Sources for TRY-GTA5-1 Gene

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