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Aliases for TRX-CAT1-5 Gene

Subcategory (RNA class) for TRX-CAT1-5 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRX-CAT1-5 Gene

  • Transfer RNA-IMet (CAT) 1-5 2 3
  • Transfer RNA Initiator Methionine (CAT) 1-6 2 3
  • Transfer RNA Methionine 18 (Anticodon CAU) 2 3
  • Transfer RNA-IMet (CAT) 1-6 2 3
  • TRNA-IMet-CAT-1-6 3
  • TRX-CAT1-6 3
  • TRNAM18 3

External Ids for TRX-CAT1-5 Gene

Previous HGNC Symbols for TRX-CAT1-5 Gene

  • TRNAM18
  • TRX-CAT1-6

Previous GeneCards Identifiers for TRX-CAT1-5 Gene

  • GC06M026450
  • GC06M026476

Summaries for TRX-CAT1-5 Gene

GeneCards Summary for TRX-CAT1-5 Gene

TRX-CAT1-5 (Transfer RNA-IMet (CAT) 1-5) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRX-CAT1-5 Gene

Genomics for TRX-CAT1-5 Gene

Regulatory Elements for TRX-CAT1-5 Gene

Enhancers for TRX-CAT1-5 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TRX-CAT1-5 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRX-CAT1-5 Gene

Chromosome:
6
Start:
27,332,985 bp from pter
End:
27,333,056 bp from pter
Size:
72 bases
Orientation:
Minus strand

Genomic View for TRX-CAT1-5 Gene

Genes around TRX-CAT1-5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRX-CAT1-5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRX-CAT1-5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRX-CAT1-5 Gene

Proteins for TRX-CAT1-5 Gene

Post-translational modifications for TRX-CAT1-5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRX-CAT1-5 Gene

Domains & Families for TRX-CAT1-5 Gene

Gene Families for TRX-CAT1-5 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRX-CAT1-5: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRX-CAT1-5 Gene

Function for TRX-CAT1-5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRX-CAT1-5 Gene

Localization for TRX-CAT1-5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRX-CAT1-5 Gene

Pathways & Interactions for TRX-CAT1-5 Gene

SuperPathways for TRX-CAT1-5 Gene

No Data Available

Interacting Proteins for TRX-CAT1-5 Gene

Gene Ontology (GO) - Biological Process for TRX-CAT1-5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRX-CAT1-5 Gene

Drugs & Compounds for TRX-CAT1-5 Gene

No Compound Related Data Available

Transcripts for TRX-CAT1-5 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRX-CAT1-5 Gene

No ASD Table

Relevant External Links for TRX-CAT1-5 Gene

GeneLoc Exon Structure for
TRX-CAT1-5
ECgene alternative splicing isoforms for
TRX-CAT1-5

No data available for mRNA/cDNA for TRX-CAT1-5 Gene

Expression for TRX-CAT1-5 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRX-CAT1-5 Gene

Orthologs for TRX-CAT1-5 Gene

No data available for Orthologs and Evolution for TRX-CAT1-5 Gene

Paralogs for TRX-CAT1-5 Gene

No data available for Paralogs for TRX-CAT1-5 Gene

Variants for TRX-CAT1-5 Gene

Relevant External Links for TRX-CAT1-5 Gene

HapMap Linkage Disequilibrium report
TRX-CAT1-5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRX-CAT1-5 Gene

Disorders for TRX-CAT1-5 Gene

No disorders were found for TRX-CAT1-5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRX-CAT1-5 Gene

Publications for TRX-CAT1-5 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 67

Products for TRX-CAT1-5 Gene

Sources for TRX-CAT1-5 Gene

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