Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRW-CCA5-1 Gene

Subcategory (RNA class) for TRW-CCA5-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRW-CCA5-1 Gene

  • Transfer RNA-Trp (CCA) 5-1 2 3
  • Transfer RNA Tryptophan 6 (Anticodon CCA) 2 3
  • TRNA-Trp-CCA-5-1 3
  • TRNAW6 3

External Ids for TRW-CCA5-1 Gene

ORGUL Members for TRW-CCA5-1 Gene

Previous HGNC Symbols for TRW-CCA5-1 Gene

  • TRNAW6

Summaries for TRW-CCA5-1 Gene

GeneCards Summary for TRW-CCA5-1 Gene

TRW-CCA5-1 (Transfer RNA-Trp (CCA) 5-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRW-CCA5-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRW-CCA5-1 Gene

Genomics for TRW-CCA5-1 Gene

GeneHancer (GH) Regulatory Elements for TRW-CCA5-1 Gene

Promoters and enhancers for TRW-CCA5-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I099470 Enhancer 0.6 ENCODE 550.8 +0.8 802 0.7 DRAP1 BCOR ELF3 SAP130 ARID4B ZMYM3 DMAP1 GABPA ZNF121 MIER3 GC07P099471 TRW-CCA5-1 ATP5MF ZNF789
GH07I099469 Enhancer 0.4 ENCODE 550.8 +0.1 149 0.2 USF1 ATF3 ZNF24 GC07P099471 TRW-CCA5-1 ZNF789
GH07I099472 Enhancer 0.4 ENCODE 550.8 0.0 -41 0.2 USF1 ATF3 ZNF24 GC07P099471 TRW-CCA5-1 ATP5MF
GH07I099471 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.8 +2.9 2920 3 HDGF PKNOX1 CLOCK FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF789 ZSCAN25 PPP1R35 PTCD1 MEPCE TRRAP STAG3L5P TRIM4 LOC101927550 AP4M1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRW-CCA5-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRW-CCA5-1 Gene

Genomic Locations for TRW-CCA5-1 Gene
chr7:99,469,684-99,469,755
(GRCh38/hg38)
Size:
72 bases
Orientation:
Plus strand
chr7:99,067,307-99,067,378
(GRCh37/hg19)

Genomic View for TRW-CCA5-1 Gene

Genes around TRW-CCA5-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRW-CCA5-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRW-CCA5-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRW-CCA5-1 Gene

Proteins for TRW-CCA5-1 Gene

Post-translational modifications for TRW-CCA5-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRW-CCA5-1 Gene

Domains & Families for TRW-CCA5-1 Gene

Gene Families for TRW-CCA5-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRW-CCA5-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRW-CCA5-1 Gene

Function for TRW-CCA5-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRW-CCA5-1 Gene

Localization for TRW-CCA5-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRW-CCA5-1 Gene

Pathways & Interactions for TRW-CCA5-1 Gene

SuperPathways for TRW-CCA5-1 Gene

No Data Available

Interacting Proteins for TRW-CCA5-1 Gene

Gene Ontology (GO) - Biological Process for TRW-CCA5-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRW-CCA5-1 Gene

Drugs & Compounds for TRW-CCA5-1 Gene

No Compound Related Data Available

Transcripts for TRW-CCA5-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRW-CCA5-1 Gene

No ASD Table

Relevant External Links for TRW-CCA5-1 Gene

GeneLoc Exon Structure for
TRW-CCA5-1
ECgene alternative splicing isoforms for
TRW-CCA5-1

No data available for mRNA/cDNA for TRW-CCA5-1 Gene

Expression for TRW-CCA5-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRW-CCA5-1 Gene

Orthologs for TRW-CCA5-1 Gene

No data available for Orthologs and Evolution for TRW-CCA5-1 Gene

Paralogs for TRW-CCA5-1 Gene

No data available for Paralogs for TRW-CCA5-1 Gene

Variants for TRW-CCA5-1 Gene

Additional Variant Information for TRW-CCA5-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRW-CCA5-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRW-CCA5-1 Gene

Disorders for TRW-CCA5-1 Gene

No disorders were found for TRW-CCA5-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRW-CCA5-1 Gene

Publications for TRW-CCA5-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRW-CCA5-1 Gene

Sources for TRW-CCA5-1 Gene

Content
Loading form....