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Aliases for TRW-CCA1-1 Gene

Subcategory (RNA class) for TRW-CCA1-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRW-CCA1-1 Gene

  • Transfer RNA-Trp (CCA) 1-1 2 3
  • Transfer RNA Tryptophan 4 (Anticodon CCA) 2 3
  • TRNA-Trp-CCA-1-1 3
  • TRNAW4 3

External Ids for TRW-CCA1-1 Gene

ORGUL Members for TRW-CCA1-1 Gene

Previous HGNC Symbols for TRW-CCA1-1 Gene

  • TRNAW4

Previous GeneCards Identifiers for TRW-CCA1-1 Gene

  • GC17M008251
  • GC17M008288
  • GC17M008301
  • GC17M008351
  • GC17M008386
  • GC17M008423

Summaries for TRW-CCA1-1 Gene

GeneCards Summary for TRW-CCA1-1 Gene

TRW-CCA1-1 (Transfer RNA-Trp (CCA) 1-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRW-CCA1-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRW-CCA1-1 Gene

Genomics for TRW-CCA1-1 Gene

Regulatory Elements for TRW-CCA1-1 Gene

Enhancers for TRW-CCA1-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H008219 1.2 ENCODE dbSUPER 0.7 +2.5 2483 0 ELF3 TBP ATF1 FOXA2 NFRKB THRB ZSCAN9 RARA GTF3C2 ATF7 POLR2A DVL2 PFAS ENSG00000265749 CTC1 SNORD10 WRAP53 SNORA48 KCTD11 CNTROB
GH17H008218 0.9 ENCODE dbSUPER 0.7 +2.0 2003 0 BCOR PKNOX1 ATF1 CEBPB ZNF384 DPF2 CEBPG OSR2 ADNP HMBOX1 GC17M008475 TRW-CCA1-1 AURKB
GH17H008212 1.2 ENCODE dbSUPER 0.4 +8.1 8083 0 TBP PKNOX1 ARID4B DMAP1 ZBTB40 RAD21 ZSCAN9 RARA GTF3C2 ZNF121 NEURL4 POLR2A DVL2 PFAS ENSG00000265749 CTC1 SNORD10 WRAP53 SNORA48 KCTD11
GH17H008215 0.4 ENCODE 0.4 +5.9 5883 0 ZNF384 AURKB GC17M008475 TRW-CCA1-1
GH17H008214 0.2 ENCODE 0.4 +6.5 6463 0 AURKB GC17M008475 TRW-CCA1-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRW-CCA1-1 on UCSC Golden Path with GeneCards custom track

Promoters for TRW-CCA1-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000090976 -1060 3601 MLX FEZF1 DMAP1 YY1 ZNF143 SP3 ZC3H11A NFYC SSRP1 ZNF610

Genomic Location for TRW-CCA1-1 Gene

Chromosome:
17
Start:
8,220,869 bp from pter
End:
8,220,940 bp from pter
Size:
72 bases
Orientation:
Minus strand

Genomic View for TRW-CCA1-1 Gene

Genes around TRW-CCA1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRW-CCA1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRW-CCA1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRW-CCA1-1 Gene

Proteins for TRW-CCA1-1 Gene

Post-translational modifications for TRW-CCA1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRW-CCA1-1 Gene

Domains & Families for TRW-CCA1-1 Gene

Gene Families for TRW-CCA1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRW-CCA1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRW-CCA1-1 Gene

Function for TRW-CCA1-1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRW-CCA1-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRW-CCA1-1 Gene

Localization for TRW-CCA1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRW-CCA1-1 Gene

Pathways & Interactions for TRW-CCA1-1 Gene

SuperPathways for TRW-CCA1-1 Gene

No Data Available

Interacting Proteins for TRW-CCA1-1 Gene

Gene Ontology (GO) - Biological Process for TRW-CCA1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRW-CCA1-1 Gene

Drugs & Compounds for TRW-CCA1-1 Gene

No Compound Related Data Available

Transcripts for TRW-CCA1-1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRW-CCA1-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRW-CCA1-1 Gene

No ASD Table

Relevant External Links for TRW-CCA1-1 Gene

GeneLoc Exon Structure for
TRW-CCA1-1
ECgene alternative splicing isoforms for
TRW-CCA1-1

No data available for mRNA/cDNA for TRW-CCA1-1 Gene

Expression for TRW-CCA1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRW-CCA1-1 Gene

Orthologs for TRW-CCA1-1 Gene

No data available for Orthologs and Evolution for TRW-CCA1-1 Gene

Paralogs for TRW-CCA1-1 Gene

No data available for Paralogs for TRW-CCA1-1 Gene

Variants for TRW-CCA1-1 Gene

Relevant External Links for TRW-CCA1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRW-CCA1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRW-CCA1-1 Gene

Disorders for TRW-CCA1-1 Gene

No disorders were found for TRW-CCA1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRW-CCA1-1 Gene

Publications for TRW-CCA1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRW-CCA1-1 Gene

Sources for TRW-CCA1-1 Gene

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