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Aliases for TRV-TAC3-1 Gene

Subcategory (RNA class) for TRV-TAC3-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRV-TAC3-1 Gene

  • Transfer RNA-Val (TAC) 3-1 2 3
  • Transfer RNA Valine 26 (Anticodon UAC) 2 3
  • TRNA-Val-TAC-3-1 3
  • TRNAV26 3

External Ids for TRV-TAC3-1 Gene

ORGUL Members for TRV-TAC3-1 Gene

Previous HGNC Symbols for TRV-TAC3-1 Gene

  • TRNAV26

Summaries for TRV-TAC3-1 Gene

GeneCards Summary for TRV-TAC3-1 Gene

TRV-TAC3-1 (Transfer RNA-Val (TAC) 3-1) is an RNA Gene, and is affiliated with the tRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRV-TAC3-1 Gene

Genomics for TRV-TAC3-1 Gene

Regulatory Elements for TRV-TAC3-1 Gene

Enhancers for TRV-TAC3-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G005852 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +0.8 752 1.9 PKNOX1 ARNT ARID4B SIN3A ZNF2 ZNF143 ZNF263 SP3 MXD4 TBX21 LOC105376384 ENSG00000226647 NRBF2P5 ANKRD16 PFKFB3 GDI2 IL15RA TRV-TAC3-1 GC10M005854
GH10G005843 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.5 8533 4.2 HDGF PKNOX1 ARNT ZFP64 YY1 GLIS2 ZNF766 CBX5 FOS JUNB ANKRD16 LOC105376384 FBXO18 NRBF2P5 FAM208B ASB13 GDI2 PFKFB3 IL15RA TRV-TAC3-1
GH10G005860 1.5 Ensembl ENCODE dbSUPER 0.4 -8.3 -8271 2.3 HDGF PKNOX1 FOXA2 CBX5 ZNF143 ZNF207 FOS SP5 JUNB TBX21 ANKRD16 LOC105376384 FBXO18 GDI2 RPL12P28 GC10M005854 TRV-TAC3-1
GH10G005858 0.2 ENCODE 0.4 -5.1 -5090 0.2 LOC105376384 RPL12P28 GC10M005854 TRV-TAC3-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRV-TAC3-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRV-TAC3-1 Gene

Chromosome:
10
Start:
5,853,711 bp from pter
End:
5,853,783 bp from pter
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRV-TAC3-1 Gene

Genes around TRV-TAC3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRV-TAC3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRV-TAC3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRV-TAC3-1 Gene

Proteins for TRV-TAC3-1 Gene

Post-translational modifications for TRV-TAC3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRV-TAC3-1 Gene

Domains & Families for TRV-TAC3-1 Gene

Gene Families for TRV-TAC3-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRV-TAC3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRV-TAC3-1 Gene

Function for TRV-TAC3-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRV-TAC3-1 Gene

Localization for TRV-TAC3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRV-TAC3-1 Gene

Pathways & Interactions for TRV-TAC3-1 Gene

SuperPathways for TRV-TAC3-1 Gene

No Data Available

Interacting Proteins for TRV-TAC3-1 Gene

Gene Ontology (GO) - Biological Process for TRV-TAC3-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRV-TAC3-1 Gene

Drugs & Compounds for TRV-TAC3-1 Gene

No Compound Related Data Available

Transcripts for TRV-TAC3-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRV-TAC3-1 Gene

No ASD Table

Relevant External Links for TRV-TAC3-1 Gene

GeneLoc Exon Structure for
TRV-TAC3-1
ECgene alternative splicing isoforms for
TRV-TAC3-1

No data available for mRNA/cDNA for TRV-TAC3-1 Gene

Expression for TRV-TAC3-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRV-TAC3-1 Gene

Orthologs for TRV-TAC3-1 Gene

No data available for Orthologs and Evolution for TRV-TAC3-1 Gene

Paralogs for TRV-TAC3-1 Gene

No data available for Paralogs for TRV-TAC3-1 Gene

Variants for TRV-TAC3-1 Gene

Relevant External Links for TRV-TAC3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRV-TAC3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRV-TAC3-1 Gene

Disorders for TRV-TAC3-1 Gene

No disorders were found for TRV-TAC3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRV-TAC3-1 Gene

Publications for TRV-TAC3-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRV-TAC3-1 Gene

Sources for TRV-TAC3-1 Gene

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