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TRV-CAC3-1 Gene(RNA Gene)

Transfer RNA-Val (CAC) 3-1

GCID:
GC19M004734
GIFtS:
9
Genes Participants
UDN Logo

Aliases for TRV-CAC3-1 Gene

Subcategory (RNA class) for TRV-CAC3-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRV-CAC3-1 Gene

  • Transfer RNA-Val (CAC) 3-1 2 3
  • Transfer RNA Valine 32 (Anticodon CAC) 2 3
  • TRNA-Val-CAC-3-1 3
  • TRNAV32 3

External Ids for TRV-CAC3-1 Gene

ORGUL Members for TRV-CAC3-1 Gene

Previous HGNC Symbols for TRV-CAC3-1 Gene

  • TRNAV32

Previous GeneCards Identifiers for TRV-CAC3-1 Gene

  • GC19M004730
  • GC19M004732

Summaries for TRV-CAC3-1 Gene

GeneCards Summary for TRV-CAC3-1 Gene

TRV-CAC3-1 (Transfer RNA-Val (CAC) 3-1) is an RNA Gene, and is affiliated with the tRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRV-CAC3-1 Gene

Genomics for TRV-CAC3-1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for TRV-CAC3-1 Gene


Promoters for TRV-CAC3-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TRV-CAC3-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRV-CAC3-1 Gene

Chromosome:
19
Start:
4,724,635 bp from pter
End:
4,724,707 bp from pter
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRV-CAC3-1 Gene

Genes around TRV-CAC3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRV-CAC3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRV-CAC3-1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TRV-CAC3-1 Gene

Proteins for TRV-CAC3-1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TRV-CAC3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRV-CAC3-1 Gene

Domains & Families for TRV-CAC3-1 Gene

Gene Families for TRV-CAC3-1 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRV-CAC3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRV-CAC3-1 Gene

Function for TRV-CAC3-1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRV-CAC3-1 Gene

Localization for TRV-CAC3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRV-CAC3-1 Gene

Pathways & Interactions for TRV-CAC3-1 Gene

SuperPathways for TRV-CAC3-1 Gene

PathCards logoMore details on SuperPathways for TRV-CAC3-1
No Data Available

Interacting Proteins for TRV-CAC3-1 Gene

Gene Ontology (GO) - Biological Process for TRV-CAC3-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRV-CAC3-1 Gene

Drugs & Compounds for TRV-CAC3-1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TRV-CAC3-1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRV-CAC3-1 Gene

No ASD Table

Relevant External Links for TRV-CAC3-1 Gene

GeneLoc Exon Structure for
TRV-CAC3-1
ECgene alternative splicing isoforms for
TRV-CAC3-1

No data available for mRNA/cDNA for TRV-CAC3-1 Gene

Expression for TRV-CAC3-1 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRV-CAC3-1 Gene

Orthologs for TRV-CAC3-1 Gene

No data available for Orthologs and Evolution for TRV-CAC3-1 Gene

Paralogs for TRV-CAC3-1 Gene

No data available for Paralogs for TRV-CAC3-1 Gene

Variants for TRV-CAC3-1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TRV-CAC3-1 Gene

Disorders for TRV-CAC3-1 Gene

No disorders were found for TRV-CAC3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRV-CAC3-1 Gene

Publications for TRV-CAC3-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 67
  2. Identity determinants of human tRNA(Ser): sequence elements necessary for serylation and maturation of a tRNA with a long extra arm. (PMID: 8344269) Achsel T. … Gross H.J. (EMBO J. 1993) 3
  3. The first human genes for tRNA(ArgICG), tRNA(GlyUCC), and tRNA(ThrIGU) and more tRNA(Val) pseudogenes: expression and pre-tRNA maturation in HeLa cell-free extracts. (PMID: 1457046) KaAsar Y. … Gross H.J. (DNA Cell Biol. 1992) 3
  4. Genes, variant genes and pseudogenes of the human tRNA(Val) gene family. Expression and pre-tRNA maturation in vitro. (PMID: 2585499) Thomann H.U. … Gross H.J. (J. Mol. Biol. 1989) 3

Products for TRV-CAC3-1 Gene

Sources for TRV-CAC3-1 Gene

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