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Aliases for TRV-AAC6-1 Gene

Subcategory (RNA class) for TRV-AAC6-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRV-AAC6-1 Gene

  • Transfer RNA-Val (AAC) 6-1 2 3
  • Transfer RNA Valine 18 (Anticodon AAC) 2 3
  • TRNA-Val-AAC-6-1 3
  • TRNAV18 3

External Ids for TRV-AAC6-1 Gene

ORGUL Members for TRV-AAC6-1 Gene

Previous HGNC Symbols for TRV-AAC6-1 Gene

  • TRNAV18

Summaries for TRV-AAC6-1 Gene

GeneCards Summary for TRV-AAC6-1 Gene

TRV-AAC6-1 (Transfer RNA-Val (AAC) 6-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRV-AAC6-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRV-AAC6-1 Gene

Genomics for TRV-AAC6-1 Gene

Regulatory Elements for TRV-AAC6-1 Gene

Enhancers for TRV-AAC6-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H028735 1.2 ENCODE dbSUPER 0.7 +0.1 128 0 PKNOX1 ATF1 ARNT ZNF2 GTF3C2 ATF7 TSHZ1 ZNF592 MEF2D NBN TRIM27 ZKSCAN8 ZSCAN12 ZKSCAN3 ZSCAN23 ZKSCAN4 SUMO2P1 ZNF603P GC06M028736 RPSAP2
GH06H028737 1 ENCODE dbSUPER 0.7 -2.5 -2463 1 TBP L3MBTL2 NFRKB CEBPB ELF1 E2F1 CC2D1A ZFHX2 ZSCAN16 EGR1 TRIM27 ZNF602P ZFP57 GC06M028736 TRV-AAC6-1 TRR-CCG1-1
GH06H028742 1.2 ENCODE dbSUPER 0.4 -7.4 -7389 0 ATF1 GTF3C2 ZNF766 GATA2 ELK1 ATF7 SP3 ZNF592 NBN HMBOX1 ZKSCAN8 ZSCAN12 ZKSCAN3 ZSCAN23 ZKSCAN4 SUMO2P1 GPX5 ZNF603P ZFP57 TRR-CCG1-1
GH06H028744 0.8 ENCODE 0.4 -6.6 -6589 0 BCOR TBP ATF1 JUN CHAMP1 FOSL1 GTF3C2 CTBP1 ELK1 POLR3A TRIM27 ZKSCAN3 ZKSCAN4 ZKSCAN8 GPX5 TRR-CCG1-1 GC06M028736 TRV-AAC6-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRV-AAC6-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRV-AAC6-1 Gene

Chromosome:
6
Start:
28,735,429 bp from pter
End:
28,735,500 bp from pter
Size:
72 bases
Orientation:
Minus strand

Genomic View for TRV-AAC6-1 Gene

Genes around TRV-AAC6-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRV-AAC6-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRV-AAC6-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for TRV-AAC6-1 Gene

Post-translational modifications for TRV-AAC6-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRV-AAC6-1 Gene

Domains & Families for TRV-AAC6-1 Gene

Gene Families for TRV-AAC6-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRV-AAC6-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRV-AAC6-1 Gene

Function for TRV-AAC6-1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRV-AAC6-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRV-AAC6-1 Gene

Localization for TRV-AAC6-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRV-AAC6-1 Gene

Pathways & Interactions for TRV-AAC6-1 Gene

SuperPathways for TRV-AAC6-1 Gene

No Data Available

Interacting Proteins for TRV-AAC6-1 Gene

Gene Ontology (GO) - Biological Process for TRV-AAC6-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRV-AAC6-1 Gene

Drugs & Compounds for TRV-AAC6-1 Gene

No Compound Related Data Available

Transcripts for TRV-AAC6-1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRV-AAC6-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRV-AAC6-1 Gene

No ASD Table

Relevant External Links for TRV-AAC6-1 Gene

GeneLoc Exon Structure for
TRV-AAC6-1
ECgene alternative splicing isoforms for
TRV-AAC6-1

No data available for mRNA/cDNA for TRV-AAC6-1 Gene

Expression for TRV-AAC6-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRV-AAC6-1 Gene

Orthologs for TRV-AAC6-1 Gene

No data available for Orthologs and Evolution for TRV-AAC6-1 Gene

Paralogs for TRV-AAC6-1 Gene

No data available for Paralogs for TRV-AAC6-1 Gene

Variants for TRV-AAC6-1 Gene

Relevant External Links for TRV-AAC6-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRV-AAC6-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRV-AAC6-1 Gene

Disorders for TRV-AAC6-1 Gene

No disorders were found for TRV-AAC6-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRV-AAC6-1 Gene

Publications for TRV-AAC6-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRV-AAC6-1 Gene

Sources for TRV-AAC6-1 Gene

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