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Aliases for TRV-AAC1-3 Gene

Subcategory (RNA class) for TRV-AAC1-3 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRV-AAC1-3 Gene

  • Transfer RNA-Val (AAC) 1-3 2 3
  • Transfer RNA Valine (IAC), Isoacceptor 3 2 3
  • Transfer RNA Valine 3 (Anticodon AAC) 2 3
  • TRNA Valine (IAC) 3 (Isoacceptor) 3
  • TRNA Valine (IAC), Isoacceptor 3 3
  • TRNA-Val-AAC-1-3 3
  • TRNAV3 3
  • TRV3 3

External Ids for TRV-AAC1-3 Gene

Previous HGNC Symbols for TRV-AAC1-3 Gene

  • TRV3
  • TRNAV3

Summaries for TRV-AAC1-3 Gene

GeneCards Summary for TRV-AAC1-3 Gene

TRV-AAC1-3 (Transfer RNA-Val (AAC) 1-3) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRV-AAC1-3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRV-AAC1-3 Gene

Genomics for TRV-AAC1-3 Gene

Regulatory Elements for TRV-AAC1-3 Gene

Enhancers for TRV-AAC1-3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H181168 1.6 Ensembl ENCODE dbSUPER 0.7 +0.3 251 1 HDGF ARNT SIN3A FEZF1 ZNF2 SP3 SP5 REST ZNF592 ZFP41 ENSG00000233937 RACK1 ZFP62 CNOT6 ENSG00000248514 TRIM52 SNORD96A GFPT2 TRV-AAC1-3 TRV-CAC1-4
GH05H181169 1.1 Ensembl dbSUPER 0.7 -1.1 -1110 0 ATF1 ZEB1 ZNF121 ZNF766 GATA2 ZNF143 ATF7 CREM ZNF680 ZNF362 ENSG00000248514 RACK1 TRL-AAG7-1 TRV-AAC1-3
GH05H181167 1 ENCODE dbSUPER 0.7 -1.6 -1604 0 CTCF ZNF76 HIC1 ZNF766 GATA3 GATA2 ZBTB48 PATZ1 ADNP SMC3 RACK1 TRL-AAG7-1 TRV-AAC1-3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRV-AAC1-3 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRV-AAC1-3 Gene

Chromosome:
5
Start:
181,169,610 bp from pter
End:
181,169,682 bp from pter
Size:
73 bases
Orientation:
Plus strand

Genomic View for TRV-AAC1-3 Gene

Genes around TRV-AAC1-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRV-AAC1-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRV-AAC1-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRV-AAC1-3 Gene

Proteins for TRV-AAC1-3 Gene

Post-translational modifications for TRV-AAC1-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRV-AAC1-3 Gene

Domains & Families for TRV-AAC1-3 Gene

Gene Families for TRV-AAC1-3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRV-AAC1-3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRV-AAC1-3 Gene

Function for TRV-AAC1-3 Gene

Phenotypes From GWAS Catalog for TRV-AAC1-3 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRV-AAC1-3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRV-AAC1-3 Gene

Localization for TRV-AAC1-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRV-AAC1-3 Gene

Pathways & Interactions for TRV-AAC1-3 Gene

SuperPathways for TRV-AAC1-3 Gene

No Data Available

Interacting Proteins for TRV-AAC1-3 Gene

Gene Ontology (GO) - Biological Process for TRV-AAC1-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRV-AAC1-3 Gene

Drugs & Compounds for TRV-AAC1-3 Gene

No Compound Related Data Available

Transcripts for TRV-AAC1-3 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRV-AAC1-3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRV-AAC1-3 Gene

No ASD Table

Relevant External Links for TRV-AAC1-3 Gene

GeneLoc Exon Structure for
TRV-AAC1-3
ECgene alternative splicing isoforms for
TRV-AAC1-3

No data available for mRNA/cDNA for TRV-AAC1-3 Gene

Expression for TRV-AAC1-3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRV-AAC1-3 Gene

Orthologs for TRV-AAC1-3 Gene

No data available for Orthologs and Evolution for TRV-AAC1-3 Gene

Paralogs for TRV-AAC1-3 Gene

No data available for Paralogs for TRV-AAC1-3 Gene

Variants for TRV-AAC1-3 Gene

Relevant External Links for TRV-AAC1-3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRV-AAC1-3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRV-AAC1-3 Gene

Disorders for TRV-AAC1-3 Gene

No disorders were found for TRV-AAC1-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRV-AAC1-3 Gene

Publications for TRV-AAC1-3 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60
  2. The first human genes for tRNA(ArgICG), tRNA(GlyUCC), and tRNA(ThrIGU) and more tRNA(Val) pseudogenes: expression and pre-tRNA maturation in HeLa cell-free extracts. (PMID: 1457046) Kaçar Y … Gross HJ (DNA and cell biology 1992) 2 60

Products for TRV-AAC1-3 Gene

Sources for TRV-AAC1-3 Gene

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