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Aliases for TRT-TGT5-1 Gene

Subcategory (RNA class) for TRT-TGT5-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRT-TGT5-1 Gene

  • Transfer RNA-Thr (TGT) 5-1 2 3
  • Transfer RNA Threonine 12 (Anticodon UGU) 2 3
  • TRNA-Thr-TGT-5-1 3
  • TRNAT12 3

External Ids for TRT-TGT5-1 Gene

ORGUL Members for TRT-TGT5-1 Gene

Previous HGNC Symbols for TRT-TGT5-1 Gene

  • TRNAT12

Summaries for TRT-TGT5-1 Gene

GeneCards Summary for TRT-TGT5-1 Gene

TRT-TGT5-1 (Transfer RNA-Thr (TGT) 5-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRT-TGT5-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRT-TGT5-1 Gene

Genomics for TRT-TGT5-1 Gene

Regulatory Elements for TRT-TGT5-1 Gene


Promoters for TRT-TGT5-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000066391 1610 4201 MLX ZFP64 DMAP1 YY1 ZNF143 SP3 NFYC SSRP1 ZNF610 GLIS1

Genomic Location for TRT-TGT5-1 Gene

Chromosome:
14
Start:
20,681,690 bp from pter
End:
20,681,762 bp from pter
Size:
73 bases
Orientation:
Plus strand

Genomic View for TRT-TGT5-1 Gene

Genes around TRT-TGT5-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRT-TGT5-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRT-TGT5-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRT-TGT5-1 Gene

Proteins for TRT-TGT5-1 Gene

Post-translational modifications for TRT-TGT5-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRT-TGT5-1 Gene

Domains & Families for TRT-TGT5-1 Gene

Gene Families for TRT-TGT5-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRT-TGT5-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRT-TGT5-1 Gene

Function for TRT-TGT5-1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRT-TGT5-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRT-TGT5-1 Gene

Localization for TRT-TGT5-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRT-TGT5-1 Gene

Pathways & Interactions for TRT-TGT5-1 Gene

SuperPathways for TRT-TGT5-1 Gene

No Data Available

Interacting Proteins for TRT-TGT5-1 Gene

Gene Ontology (GO) - Biological Process for TRT-TGT5-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRT-TGT5-1 Gene

Drugs & Compounds for TRT-TGT5-1 Gene

No Compound Related Data Available

Transcripts for TRT-TGT5-1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRT-TGT5-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRT-TGT5-1 Gene

No ASD Table

Relevant External Links for TRT-TGT5-1 Gene

GeneLoc Exon Structure for
TRT-TGT5-1
ECgene alternative splicing isoforms for
TRT-TGT5-1

No data available for mRNA/cDNA for TRT-TGT5-1 Gene

Expression for TRT-TGT5-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRT-TGT5-1 Gene

Orthologs for TRT-TGT5-1 Gene

No data available for Orthologs and Evolution for TRT-TGT5-1 Gene

Paralogs for TRT-TGT5-1 Gene

No data available for Paralogs for TRT-TGT5-1 Gene

Variants for TRT-TGT5-1 Gene

Relevant External Links for TRT-TGT5-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRT-TGT5-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRT-TGT5-1 Gene

Disorders for TRT-TGT5-1 Gene

No disorders were found for TRT-TGT5-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRT-TGT5-1 Gene

Publications for TRT-TGT5-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRT-TGT5-1 Gene

Sources for TRT-TGT5-1 Gene

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