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Aliases for TRT-TGT4-1 Gene

Subcategory (RNA class) for TRT-TGT4-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRT-TGT4-1 Gene

  • Transfer RNA-Thr (TGT) 4-1 2 3
  • Transfer RNA Threonine 20 (Anticodon UGU) 2 3
  • TRNA-Thr-TGT-4-1 3
  • TRNAT20 3

External Ids for TRT-TGT4-1 Gene

ORGUL Members for TRT-TGT4-1 Gene

Previous HGNC Symbols for TRT-TGT4-1 Gene

  • TRNAT20

Summaries for TRT-TGT4-1 Gene

GeneCards Summary for TRT-TGT4-1 Gene

TRT-TGT4-1 (Transfer RNA-Thr (TGT) 4-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRT-TGT4-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRT-TGT4-1 Gene

Genomics for TRT-TGT4-1 Gene

Regulatory Elements for TRT-TGT4-1 Gene

Enhancers for TRT-TGT4-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14H020629 1.3 Ensembl ENCODE 0.7 -0.8 -825 4.2 FOXA2 ARNT ZFP64 ARID4B SIN3A ZNF2 FOS MXD4 NFYC REST ENSG00000258515 METTL3 SUPT16H CHD8 PARP2 METTL17 ENSG00000258768 OSGEP PIP4P1 APEX1
GH14H020628 0.5 Ensembl 0.7 +2.9 2932 0.2 ZNF341 FEZF1 ZNF600 TEAD3 GC14M020644 TRL-TAG2-1 TRT-TGT4-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRT-TGT4-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRT-TGT4-1 Gene

Genomic Locations for TRT-TGT4-1 Gene
chr14:20,631,160-20,631,232
(GRCh38/hg38)
Size:
73 bases
Orientation:
Minus strand
chr14:21,099,319-21,099,391
(GRCh37/hg19)

Genomic View for TRT-TGT4-1 Gene

Genes around TRT-TGT4-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRT-TGT4-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRT-TGT4-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRT-TGT4-1 Gene

Proteins for TRT-TGT4-1 Gene

Post-translational modifications for TRT-TGT4-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRT-TGT4-1 Gene

Domains & Families for TRT-TGT4-1 Gene

Gene Families for TRT-TGT4-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRT-TGT4-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRT-TGT4-1 Gene

Function for TRT-TGT4-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRT-TGT4-1 Gene

Localization for TRT-TGT4-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRT-TGT4-1 Gene

Pathways & Interactions for TRT-TGT4-1 Gene

SuperPathways for TRT-TGT4-1 Gene

No Data Available

Interacting Proteins for TRT-TGT4-1 Gene

Gene Ontology (GO) - Biological Process for TRT-TGT4-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRT-TGT4-1 Gene

Drugs & Compounds for TRT-TGT4-1 Gene

No Compound Related Data Available

Transcripts for TRT-TGT4-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRT-TGT4-1 Gene

No ASD Table

Relevant External Links for TRT-TGT4-1 Gene

GeneLoc Exon Structure for
TRT-TGT4-1
ECgene alternative splicing isoforms for
TRT-TGT4-1

No data available for mRNA/cDNA for TRT-TGT4-1 Gene

Expression for TRT-TGT4-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRT-TGT4-1 Gene

Orthologs for TRT-TGT4-1 Gene

No data available for Orthologs and Evolution for TRT-TGT4-1 Gene

Paralogs for TRT-TGT4-1 Gene

No data available for Paralogs for TRT-TGT4-1 Gene

Variants for TRT-TGT4-1 Gene

Relevant External Links for TRT-TGT4-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRT-TGT4-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRT-TGT4-1 Gene

Disorders for TRT-TGT4-1 Gene

No disorders were found for TRT-TGT4-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRT-TGT4-1 Gene

Publications for TRT-TGT4-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRT-TGT4-1 Gene

Sources for TRT-TGT4-1 Gene

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