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Aliases for TRT-AGT1-3 Gene

Subcategory (RNA class) for TRT-AGT1-3 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRT-AGT1-3 Gene

  • Transfer RNA-Thr (AGT) 1-3 2 3
  • Transfer RNA Threonine 4 (Anticodon AGU) 2 3
  • TRNA-Thr-AGT-1-3 3
  • TRNAT4 3

External Ids for TRT-AGT1-3 Gene

Previous HGNC Symbols for TRT-AGT1-3 Gene

  • TRNAT4

Summaries for TRT-AGT1-3 Gene

GeneCards Summary for TRT-AGT1-3 Gene

TRT-AGT1-3 (Transfer RNA-Thr (AGT) 1-3) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRT-AGT1-3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRT-AGT1-3 Gene

Genomics for TRT-AGT1-3 Gene

GeneHancer (GH) Regulatory Elements for TRT-AGT1-3 Gene

Promoters and enhancers for TRT-AGT1-3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I033175 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE 550.8 +0.1 83 2.7 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 ZFP41 LRP3 ENSG00000267054 GC19M033175 TRT-AGT1-3 GPATCH1 CEP89 ZNF507 LSM14A WDR88 PDCD5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRT-AGT1-3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRT-AGT1-3 Gene

Genomic Locations for TRT-AGT1-3 Gene
chr19:33,177,057-33,177,130
(GRCh38/hg38)
Size:
74 bases
Orientation:
Plus strand
chr19:33,667,963-33,668,061
(GRCh37/hg19)

Genomic View for TRT-AGT1-3 Gene

Genes around TRT-AGT1-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRT-AGT1-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRT-AGT1-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRT-AGT1-3 Gene

Proteins for TRT-AGT1-3 Gene

Post-translational modifications for TRT-AGT1-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRT-AGT1-3 Gene

Domains & Families for TRT-AGT1-3 Gene

Gene Families for TRT-AGT1-3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRT-AGT1-3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRT-AGT1-3 Gene

Function for TRT-AGT1-3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRT-AGT1-3 Gene

Localization for TRT-AGT1-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRT-AGT1-3 Gene

Pathways & Interactions for TRT-AGT1-3 Gene

SuperPathways for TRT-AGT1-3 Gene

No Data Available

Interacting Proteins for TRT-AGT1-3 Gene

Gene Ontology (GO) - Biological Process for TRT-AGT1-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRT-AGT1-3 Gene

Drugs & Compounds for TRT-AGT1-3 Gene

No Compound Related Data Available

Transcripts for TRT-AGT1-3 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRT-AGT1-3 Gene

No ASD Table

Relevant External Links for TRT-AGT1-3 Gene

GeneLoc Exon Structure for
TRT-AGT1-3
ECgene alternative splicing isoforms for
TRT-AGT1-3

No data available for mRNA/cDNA for TRT-AGT1-3 Gene

Expression for TRT-AGT1-3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRT-AGT1-3 Gene

Orthologs for TRT-AGT1-3 Gene

No data available for Orthologs and Evolution for TRT-AGT1-3 Gene

Paralogs for TRT-AGT1-3 Gene

No data available for Paralogs for TRT-AGT1-3 Gene

Variants for TRT-AGT1-3 Gene

Additional Variant Information for TRT-AGT1-3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRT-AGT1-3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRT-AGT1-3 Gene

Disorders for TRT-AGT1-3 Gene

No disorders were found for TRT-AGT1-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRT-AGT1-3 Gene

Publications for TRT-AGT1-3 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRT-AGT1-3 Gene

Sources for TRT-AGT1-3 Gene

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