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Aliases for TRS-TGA2-1 Gene

Subcategory (RNA class) for TRS-TGA2-1 Gene

tRNA

Quality Score for this RNA gene is

3

Aliases for TRS-TGA2-1 Gene

  • Transfer RNA-Ser (TGA) 2-1 2 3
  • Transfer RNA Serine 1 (Anticodon UGA) 2 3
  • TRNA Serine 1 (Anticodon UGA) 2 3
  • TRNA Serine (UGA) 1 2 3
  • TRNA-Ser-TGA-2-1 3
  • AL021918.1 5
  • TRNAS1 3
  • TRS1 3

External Ids for TRS-TGA2-1 Gene

ORGUL Members for TRS-TGA2-1 Gene

Previous HGNC Symbols for TRS-TGA2-1 Gene

  • TRS1
  • TRNAS1

Summaries for TRS-TGA2-1 Gene

Entrez Gene Summary for TRS-TGA2-1 Gene

  • Hong et al. (1987) [PubMed 3648680] sequenced a human serine (UGA) tRNA by the dideoxysequencing method. The gene forms a typical cloverleaf structure with all appropriate conserved bases. It shows high nucleotide sequence homology with a previously sequenced serine tRNA (Yoo, 1984).[supplied by OMIM, Sep 2009]

GeneCards Summary for TRS-TGA2-1 Gene

TRS-TGA2-1 (Transfer RNA-Ser (TGA) 2-1) is an RNA Gene, and is affiliated with the tRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRS-TGA2-1 Gene

Genomics for TRS-TGA2-1 Gene

Regulatory Elements for TRS-TGA2-1 Gene

Enhancers for TRS-TGA2-1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TRS-TGA2-1 on UCSC Golden Path with GeneCards custom track

Promoters for TRS-TGA2-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TRS-TGA2-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRS-TGA2-1 Gene

Chromosome:
6
Start:
27,545,669 bp from pter
End:
27,545,777 bp from pter
Size:
109 bases
Orientation:
Plus strand

Genomic View for TRS-TGA2-1 Gene

Genes around TRS-TGA2-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRS-TGA2-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRS-TGA2-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRS-TGA2-1 Gene

Proteins for TRS-TGA2-1 Gene

Post-translational modifications for TRS-TGA2-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRS-TGA2-1 Gene

Domains & Families for TRS-TGA2-1 Gene

Gene Families for TRS-TGA2-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRS-TGA2-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRS-TGA2-1 Gene

Function for TRS-TGA2-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRS-TGA2-1 Gene

Localization for TRS-TGA2-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRS-TGA2-1 Gene

Pathways & Interactions for TRS-TGA2-1 Gene

SuperPathways for TRS-TGA2-1 Gene

No Data Available

Interacting Proteins for TRS-TGA2-1 Gene

Gene Ontology (GO) - Biological Process for TRS-TGA2-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRS-TGA2-1 Gene

Drugs & Compounds for TRS-TGA2-1 Gene

No Compound Related Data Available

Transcripts for TRS-TGA2-1 Gene

mRNA/cDNA for TRS-TGA2-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRS-TGA2-1 Gene

No ASD Table

Relevant External Links for TRS-TGA2-1 Gene

GeneLoc Exon Structure for
TRS-TGA2-1
ECgene alternative splicing isoforms for
TRS-TGA2-1

Expression for TRS-TGA2-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRS-TGA2-1 Gene

Orthologs for TRS-TGA2-1 Gene

Evolution for TRS-TGA2-1 Gene

ENSEMBL:
Gene Tree for TRS-TGA2-1 (if available)
TreeFam:
Gene Tree for TRS-TGA2-1 (if available)

No data available for Orthologs for TRS-TGA2-1 Gene

Paralogs for TRS-TGA2-1 Gene

No data available for Paralogs for TRS-TGA2-1 Gene

Variants for TRS-TGA2-1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TRS-TGA2-1 Gene

Disorders for TRS-TGA2-1 Gene

No disorders were found for TRS-TGA2-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRS-TGA2-1 Gene

Publications for TRS-TGA2-1 Gene

  1. The nucleotide sequence of a human serine tRNA gene. (PMID: 3648680) Hong H.J. … Yoo O.J. (Nucleic Acids Res. 1987) 2 3 67
  2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3

Products for TRS-TGA2-1 Gene

Sources for TRS-TGA2-1 Gene

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