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Aliases for TRS-TGA1-1 Gene

Subcategory (RNA class) for TRS-TGA1-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRS-TGA1-1 Gene

  • Transfer RNA-Ser (TGA) 1-1 2 3
  • Transfer RNA Serine 21 (Anticodon UGA) 2 3
  • TRNA-Ser-TGA-1-1 3
  • TRNAS21 3

External Ids for TRS-TGA1-1 Gene

Previous HGNC Symbols for TRS-TGA1-1 Gene

  • TRNAS21

Summaries for TRS-TGA1-1 Gene

GeneCards Summary for TRS-TGA1-1 Gene

TRS-TGA1-1 (Transfer RNA-Ser (TGA) 1-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRS-TGA1-1 Gene

Genomics for TRS-TGA1-1 Gene

Regulatory Elements for TRS-TGA1-1 Gene

Enhancers for TRS-TGA1-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F067761 0.8 Ensembl ENCODE 0.8 -0.7 -730 4.1 HDGF CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 CBX5 ZNF207 MIR1254-1 CCAR1 RPL12P8 CTNNA3 RPS3AP38 TRS-TGA1-1
GH10F067770 1.3 Ensembl ENCODE 0.4 +7.5 7537 3.2 PKNOX1 BMI1 ZBTB40 YY1 CBX5 ZNF143 ETV6 CREM CBFB USF2 CTNNA3 SIRT1 ATOH7 TRS-TGA1-1 RPL21P92
GH10F067788 1 Ensembl ENCODE 0.3 +24.1 24135 0.5 ELF3 PKNOX1 ARID4B THRB ZNF48 ZNF2 RAD21 YY1 ZNF366 ZNF143 RPS3AP38 RPL21P92 TRS-TGA1-1
GH10F067783 1.1 FANTOM5 Ensembl ENCODE 0.3 +19.9 19898 2.0 HDGF L3MBTL2 MAFG ZNF407 ZNF512 KLF9 IRF1 NFE2 EMSY SPI1 RNU6-1250P SIRT1 RPL21P92 TRS-TGA1-1
GH10F067781 0.4 ENCODE 0.3 +16.8 16835 0.2 MIER2 REST RNU6-1250P SIRT1 RPL21P92 TRS-TGA1-1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRS-TGA1-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRS-TGA1-1 Gene

Chromosome:
10
Start:
67,764,503 bp from pter
End:
67,764,584 bp from pter
Size:
82 bases
Orientation:
Plus strand

Genomic View for TRS-TGA1-1 Gene

Genes around TRS-TGA1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRS-TGA1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRS-TGA1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRS-TGA1-1 Gene

Proteins for TRS-TGA1-1 Gene

Post-translational modifications for TRS-TGA1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRS-TGA1-1 Gene

Domains & Families for TRS-TGA1-1 Gene

Gene Families for TRS-TGA1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRS-TGA1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRS-TGA1-1 Gene

Function for TRS-TGA1-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRS-TGA1-1 Gene

Localization for TRS-TGA1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRS-TGA1-1 Gene

Pathways & Interactions for TRS-TGA1-1 Gene

SuperPathways for TRS-TGA1-1 Gene

No Data Available

Interacting Proteins for TRS-TGA1-1 Gene

Gene Ontology (GO) - Biological Process for TRS-TGA1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRS-TGA1-1 Gene

Transcripts for TRS-TGA1-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRS-TGA1-1 Gene

No ASD Table

Relevant External Links for TRS-TGA1-1 Gene

GeneLoc Exon Structure for
TRS-TGA1-1
ECgene alternative splicing isoforms for
TRS-TGA1-1

No data available for mRNA/cDNA for TRS-TGA1-1 Gene

Expression for TRS-TGA1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRS-TGA1-1 Gene

Orthologs for TRS-TGA1-1 Gene

No data available for Orthologs and Evolution for TRS-TGA1-1 Gene

Paralogs for TRS-TGA1-1 Gene

No data available for Paralogs for TRS-TGA1-1 Gene

Variants for TRS-TGA1-1 Gene

Relevant External Links for TRS-TGA1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRS-TGA1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRS-TGA1-1 Gene

Disorders for TRS-TGA1-1 Gene

No disorders were found for TRS-TGA1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRS-TGA1-1 Gene

Publications for TRS-TGA1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRS-TGA1-1 Gene

Sources for TRS-TGA1-1 Gene

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