Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRS-AGA2-3 Gene

Subcategory (RNA class) for TRS-AGA2-3 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TRS-AGA2-3 Gene

  • Transfer RNA-Ser (AGA) 2-3 2 3
  • Transfer RNA Serine 2 (Anticodon AGA) 2 3
  • TRNA Serine 2 (Anticodon AGA) 2 3
  • Transfer RNA-Ser (AGA) 2-4 2 3
  • TRNA Serine (AGA) 2 2 3
  • TRNA, Serine (AGA) 3
  • TRNA-Ser-AGA-2-4 3
  • TRS-AGA2-4 3
  • AL021918.2 5
  • TRNA-SER 3
  • TRNAS2 3
  • TRNS 3
  • TRS2 3

External Ids for TRS-AGA2-3 Gene

Previous HGNC Symbols for TRS-AGA2-3 Gene

  • TRS2
  • TRNAS2
  • TRS-AGA2-4

Previous GeneCards Identifiers for TRS-AGA2-3 Gene

  • GC06P027478

Summaries for TRS-AGA2-3 Gene

Entrez Gene Summary for TRS-AGA2-3 Gene

  • Hoe et al. (1987) [PubMed 3697066] sequenced a human serine (AGA) tRNA by the dideoxysequencing method and compared it with previously sequenced serine tRNAs.[supplied by OMIM, Sep 2009]

GeneCards Summary for TRS-AGA2-3 Gene

TRS-AGA2-3 (Transfer RNA-Ser (AGA) 2-3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRS-AGA2-3 Gene

Genomics for TRS-AGA2-3 Gene

Regulatory Elements for TRS-AGA2-3 Gene

Enhancers for TRS-AGA2-3 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TRS-AGA2-3 on UCSC Golden Path with GeneCards custom track

Promoters for TRS-AGA2-3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TRS-AGA2-3 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRS-AGA2-3 Gene

Chromosome:
6
Start:
27,495,813 bp from pter
End:
27,495,929 bp from pter
Size:
117 bases
Orientation:
Plus strand

Genomic View for TRS-AGA2-3 Gene

Genes around TRS-AGA2-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRS-AGA2-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRS-AGA2-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRS-AGA2-3 Gene

Proteins for TRS-AGA2-3 Gene

Post-translational modifications for TRS-AGA2-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRS-AGA2-3 Gene

Domains & Families for TRS-AGA2-3 Gene

Gene Families for TRS-AGA2-3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRS-AGA2-3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRS-AGA2-3 Gene

Function for TRS-AGA2-3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRS-AGA2-3 Gene

Localization for TRS-AGA2-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRS-AGA2-3 Gene

Pathways & Interactions for TRS-AGA2-3 Gene

SuperPathways for TRS-AGA2-3 Gene

No Data Available

Interacting Proteins for TRS-AGA2-3 Gene

Gene Ontology (GO) - Biological Process for TRS-AGA2-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRS-AGA2-3 Gene

Drugs & Compounds for TRS-AGA2-3 Gene

No Compound Related Data Available

Transcripts for TRS-AGA2-3 Gene

mRNA/cDNA for TRS-AGA2-3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRS-AGA2-3 Gene

No ASD Table

Relevant External Links for TRS-AGA2-3 Gene

GeneLoc Exon Structure for
TRS-AGA2-3
ECgene alternative splicing isoforms for
TRS-AGA2-3

Expression for TRS-AGA2-3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRS-AGA2-3 Gene

Orthologs for TRS-AGA2-3 Gene

Evolution for TRS-AGA2-3 Gene

ENSEMBL:
Gene Tree for TRS-AGA2-3 (if available)
TreeFam:
Gene Tree for TRS-AGA2-3 (if available)

No data available for Orthologs for TRS-AGA2-3 Gene

Paralogs for TRS-AGA2-3 Gene

No data available for Paralogs for TRS-AGA2-3 Gene

Variants for TRS-AGA2-3 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TRS-AGA2-3 Gene

Disorders for TRS-AGA2-3 Gene

No disorders were found for TRS-AGA2-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRS-AGA2-3 Gene

Publications for TRS-AGA2-3 Gene

  1. The nucleotide sequence of a gene coding for human serine tRNA. (PMID: 3697066) Hoe K.L. … Yoo O.J. (Nucleic Acids Res. 1987) 2 3 67
  2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3
  3. Minimal tRNA(Ser) and tRNA(Sec) substrates for human seryl-tRNA synthetase: contribution of tRNA domains to serylation and tertiary structure. (PMID: 9637248) Heckl M. … Gross H.J. (FEBS Lett. 1998) 3

Products for TRS-AGA2-3 Gene

Sources for TRS-AGA2-3 Gene

Content