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Aliases for TRS-AGA2-3 Gene

Subcategory (RNA class) for TRS-AGA2-3 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRS-AGA2-3 Gene

  • Transfer RNA-Ser (AGA) 2-3 2 3
  • Transfer RNA Serine 2 (Anticodon AGA) 2 3
  • TRNA Serine 2 (Anticodon AGA) 2 3
  • Transfer RNA-Ser (AGA) 2-4 2 3
  • TRNA Serine (AGA) 2 2 3
  • TRNA, Serine (AGA) 3
  • TRNA-Ser-AGA-2-4 3
  • TRS-AGA2-4 3
  • TRNA-SER 3
  • TRNAS2 3
  • TRNS 3
  • TRS2 3

External Ids for TRS-AGA2-3 Gene

Previous HGNC Symbols for TRS-AGA2-3 Gene

  • TRS2
  • TRNAS2
  • TRS-AGA2-4

Previous GeneCards Identifiers for TRS-AGA2-3 Gene

  • GC06P027478

Summaries for TRS-AGA2-3 Gene

Entrez Gene Summary for TRS-AGA2-3 Gene

  • Hoe et al. (1987) [PubMed 3697066] sequenced a human serine (AGA) tRNA by the dideoxysequencing method and compared it with previously sequenced serine tRNAs.[supplied by OMIM, Sep 2009]

GeneCards Summary for TRS-AGA2-3 Gene

TRS-AGA2-3 (Transfer RNA-Ser (AGA) 2-3) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRS-AGA2-3 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRS-AGA2-3 Gene

Genomics for TRS-AGA2-3 Gene

Regulatory Elements for TRS-AGA2-3 Gene

Enhancers for TRS-AGA2-3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H027494 1.4 Ensembl ENCODE 0.7 -0.2 -166 1 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 ZNF2 ZNF766 ZNF302 ZNF143 ZSCAN12 ZKSCAN8 ZKSCAN3 ZNF322 ZSCAN9 ZSCAN23 ZNF391 ZKSCAN4 ZNF204P PGBD1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRS-AGA2-3 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRS-AGA2-3 Gene

Chromosome:
6
Start:
27,495,814 bp from pter
End:
27,495,895 bp from pter
Size:
82 bases
Orientation:
Plus strand

Genomic View for TRS-AGA2-3 Gene

Genes around TRS-AGA2-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRS-AGA2-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRS-AGA2-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRS-AGA2-3 Gene

Proteins for TRS-AGA2-3 Gene

Post-translational modifications for TRS-AGA2-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRS-AGA2-3 Gene

Domains & Families for TRS-AGA2-3 Gene

Gene Families for TRS-AGA2-3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRS-AGA2-3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRS-AGA2-3 Gene

Function for TRS-AGA2-3 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRS-AGA2-3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRS-AGA2-3 Gene

Localization for TRS-AGA2-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRS-AGA2-3 Gene

Pathways & Interactions for TRS-AGA2-3 Gene

SuperPathways for TRS-AGA2-3 Gene

No Data Available

Interacting Proteins for TRS-AGA2-3 Gene

Gene Ontology (GO) - Biological Process for TRS-AGA2-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRS-AGA2-3 Gene

Drugs & Compounds for TRS-AGA2-3 Gene

No Compound Related Data Available

Transcripts for TRS-AGA2-3 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRS-AGA2-3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRS-AGA2-3 Gene

No ASD Table

Relevant External Links for TRS-AGA2-3 Gene

GeneLoc Exon Structure for
TRS-AGA2-3
ECgene alternative splicing isoforms for
TRS-AGA2-3

No data available for mRNA/cDNA for TRS-AGA2-3 Gene

Expression for TRS-AGA2-3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRS-AGA2-3 Gene

Orthologs for TRS-AGA2-3 Gene

No data available for Orthologs and Evolution for TRS-AGA2-3 Gene

Paralogs for TRS-AGA2-3 Gene

No data available for Paralogs for TRS-AGA2-3 Gene

Variants for TRS-AGA2-3 Gene

Relevant External Links for TRS-AGA2-3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRS-AGA2-3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRS-AGA2-3 Gene

Disorders for TRS-AGA2-3 Gene

No disorders were found for TRS-AGA2-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRS-AGA2-3 Gene

Publications for TRS-AGA2-3 Gene

  1. The nucleotide sequence of a gene coding for human serine tRNA. (PMID: 3697066) Hoe KL … Yoo OJ (Nucleic acids research 1987) 2 3 60
  2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60
  3. Minimal tRNA(Ser) and tRNA(Sec) substrates for human seryl-tRNA synthetase: contribution of tRNA domains to serylation and tertiary structure. (PMID: 9637248) Heckl M … Gross HJ (FEBS letters 1998) 3 60

Products for TRS-AGA2-3 Gene

Sources for TRS-AGA2-3 Gene

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