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Aliases for TRR-TCT2-1 Gene

Subcategory (RNA class) for TRR-TCT2-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRR-TCT2-1 Gene

  • Transfer RNA-Arg (TCT) 2-1 2 3
  • Transfer RNA Arginine 1 (Anticodon UCU) 2 3
  • TRNA Arginine 1 (Anticodon UCU) 2 3
  • TRNA Arginine (UCU) 1 2 3
  • TRNAR1 3
  • TRR1 3

External Ids for TRR-TCT2-1 Gene

Previous HGNC Symbols for TRR-TCT2-1 Gene

  • TRR1
  • TRNAR1

Previous GeneCards Identifiers for TRR-TCT2-1 Gene

  • GC17P008126
  • GC17P008130
  • GC17P008138
  • GC17P008146
  • GC17P008153

Summaries for TRR-TCT2-1 Gene

Entrez Gene Summary for TRR-TCT2-1 Gene

  • Transfer RNA arginine-1 has an anticodon UCU (Morrison et al., 1991 [PubMed 2066114]).[supplied by OMIM, Sep 2009]

GeneCards Summary for TRR-TCT2-1 Gene

TRR-TCT2-1 (Transfer RNA-Arg (TCT) 2-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRR-TCT2-1 Gene

Genomics for TRR-TCT2-1 Gene

Regulatory Elements for TRR-TCT2-1 Gene

Enhancers for TRR-TCT2-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G008117 1.4 ENCODE dbSUPER 0.7 +0.3 343 7.7 AGO1 FEZF1 YY1 ZNF143 ZNF263 SP3 TBX21 ZFP41 SSRP1 ZNF610 NEURL4 NLGN2 VAMP2 HES7 CTC1 DVL2 ATP1B2 PFAS ENSG00000265749 SNORD10
GH17G008125 0.5 ENCODE 0.7 +4.3 4259 0.0 OSR2 ZBTB48 ZNF600 PRDM4 TRR-TCT2-1 HES7
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRR-TCT2-1 on UCSC Golden Path with GeneCards custom track

Promoters for TRR-TCT2-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000282320 -1025 2601 MLX AGO1 FEZF1 YY1 ZNF143 ZNF263 SP3 TBX21 ZFP41 SSRP1
ENSR00000282321 1075 1201 HDGF ARID4B SIN3A ZNF2 ZNF48 ZNF121 GLIS2 ZNF143 KLF7 SP3

Genomic Location for TRR-TCT2-1 Gene

Chromosome:
17
Start:
8,120,925 bp from pter
End:
8,121,012 bp from pter
Size:
88 bases
Orientation:
Plus strand

Genomic View for TRR-TCT2-1 Gene

Genes around TRR-TCT2-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRR-TCT2-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRR-TCT2-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRR-TCT2-1 Gene

Proteins for TRR-TCT2-1 Gene

Post-translational modifications for TRR-TCT2-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRR-TCT2-1 Gene

Domains & Families for TRR-TCT2-1 Gene

Gene Families for TRR-TCT2-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRR-TCT2-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRR-TCT2-1 Gene

Function for TRR-TCT2-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRR-TCT2-1 Gene

Localization for TRR-TCT2-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRR-TCT2-1 Gene

Pathways & Interactions for TRR-TCT2-1 Gene

SuperPathways for TRR-TCT2-1 Gene

No Data Available

Interacting Proteins for TRR-TCT2-1 Gene

Gene Ontology (GO) - Biological Process for TRR-TCT2-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRR-TCT2-1 Gene

Drugs & Compounds for TRR-TCT2-1 Gene

No Compound Related Data Available

Transcripts for TRR-TCT2-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRR-TCT2-1 Gene

No ASD Table

Relevant External Links for TRR-TCT2-1 Gene

GeneLoc Exon Structure for
TRR-TCT2-1
ECgene alternative splicing isoforms for
TRR-TCT2-1

Expression for TRR-TCT2-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRR-TCT2-1 Gene

Orthologs for TRR-TCT2-1 Gene

No data available for Orthologs and Evolution for TRR-TCT2-1 Gene

Paralogs for TRR-TCT2-1 Gene

No data available for Paralogs for TRR-TCT2-1 Gene

Variants for TRR-TCT2-1 Gene

Relevant External Links for TRR-TCT2-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRR-TCT2-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRR-TCT2-1 Gene

Disorders for TRR-TCT2-1 Gene

No disorders were found for TRR-TCT2-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRR-TCT2-1 Gene

Publications for TRR-TCT2-1 Gene

  1. Chromosomal assignment of a large tRNA gene cluster (tRNA(Leu), tRNA(Gln), tRNA(Lys), tRNA(Arg), tRNA(Gly)) to 17p13.1. (PMID: 2066114) Morrison N. … Connor J.M. (Hum. Genet. 1991) 2 3 64
  2. Physical map of 17p13 and the genes adjacent to p53. (PMID: 10662545) Cousin P. … Shaw P. (Genomics 2000) 3 64
  3. An intron-containing tRNAArg gene within a large cluster of human tRNA genes. (PMID: 7703509) Bourn D. … Goddard J.P. (DNA Seq. 1994) 3 64

Products for TRR-TCT2-1 Gene

Sources for TRR-TCT2-1 Gene

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